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Cow genome map

           
Conread name:
           
Ss1.1-rfce22c_a4.5
        

               
Conread position:
               
2-358
               

               
Cow position:
               
chr17:20839803-20839436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
19, 212
               

               
Conread position:
               
2-435
               

               
Cow position:
               
chr17:10271261-10271700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
5-168
               

               
Cow position:
               
chr17:20269375-20269540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
5-370
               

               
Cow position:
               
chr17:1410483-1410091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
14, 164
               

               
Conread position:
               
5-483
               

               
Cow position:
               
chr17:40771591-40772090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
6-483
               

               
Cow position:
               
chr17:43717544-43717060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
9-239
               

               
Cow position:
               
chr17:4824264-4824508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
14-351
               

               
Cow position:
               
chr17:20870325-20869974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 149
               

               
Conread position:
               
14-476
               

               
Cow position:
               
chr17:22775157-22775646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
19-374
               

               
Cow position:
               
chr17:24883791-24883419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
23, 145
               

               
Conread position:
               
22-280
               

               
Cow position:
               
chr17:3387070-3387324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 179
               

               
Conread position:
               
22-362
               

               
Cow position:
               
chr17:5900162-5900509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
22-362
               

               
Cow position:
               
chr17:20126397-20126736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
22-366
               

               
Cow position:
               
chr17:39857192-39857529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
22-369
               

               
Cow position:
               
chr17:29157206-29157563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 131
               

               
Conread position:
               
22-373
               

               
Cow position:
               
chr17:22032907-22032544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 139
               

               
Conread position:
               
22-393
               

               
Cow position:
               
chr17:29080342-29080708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
20, 105
               

               
Conread position:
               
24-374
               

               
Cow position:
               
chr17:979356-979015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
26-486
               

               
Cow position:
               
chr17:36790928-36791396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr17:8837158-8836797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
32-370
               

               
Cow position:
               
chr17:24752508-24752180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
49-287
               

               
Cow position:
               
chr17:1295755-1295513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 155
               

               
Conread position:
               
49-295
               

               
Cow position:
               
chr17:11361999-11362251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
49-374
               

               
Cow position:
               
chr17:10459120-10458780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
49-471
               

               
Cow position:
               
chr17:1035785-1035346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
55, 157
               

               
Conread position:
               
49-490
               

               
Cow position:
               
chr17:39412684-39412238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
49-515
               

               
Cow position:
               
chr17:1783793-1783311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 157
               

               
Conread position:
               
50-189
               

               
Cow position:
               
chr17:36533478-36533616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
50-190
               

               
Cow position:
               
chr17:21412430-21412285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-190
               

               
Cow position:
               
chr17:21710322-21710466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 105
               

               
Conread position:
               
50-190
               

               
Cow position:
               
chr17:40312538-40312687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
50-192
               

               
Cow position:
               
chr17:3258313-3258454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
50-212
               

               
Cow position:
               
chr17:3498847-3498680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
50-217
               

               
Cow position:
               
chr17:25168127-25168307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
50-217
               

               
Cow position:
               
chr17:38116229-38116401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
50-221
               

               
Cow position:
               
chr17:6155858-6156033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
57, 143
               

               
Conread position:
               
50-221
               

               
Cow position:
               
chr17:11035738-11035916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
39, 153
               

               
Conread position:
               
50-221
               

               
Cow position:
               
chr17:11381903-11381725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 155
               

               
Conread position:
               
50-221
               

               
Cow position:
               
chr17:30999592-30999759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 101
               

               
Conread position:
               
50-221
               

               
Cow position:
               
chr17:37163710-37163528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
50-234
               

               
Cow position:
               
chr17:12216260-12216067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-234
               

               
Cow position:
               
chr17:21017611-21017802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-234
               

               
Cow position:
               
chr17:32651433-32651625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
55, 156
               

               
Conread position:
               
50-236
               

               
Cow position:
               
chr17:11386331-11386523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr17:3306684-3306877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
50-240
               

               
Cow position:
               
chr17:5745426-5745242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
115, 80
               

               
Conread position:
               
50-241
               

               
Cow position:
               
chr17:15132980-15133161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
50-241
               

               
Cow position:
               
chr17:23337196-23337004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 82
               

               
Conread position:
               
50-246
               

               
Cow position:
               
chr17:22781504-22781709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
50-248
               

               
Cow position:
               
chr17:21874499-21874287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
50-255
               

               
Cow position:
               
chr17:15067809-15067600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 103
               

               
Conread position:
               
50-256
               

               
Cow position:
               
chr17:4612260-4612051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
55, 153
               

               
Conread position:
               
50-267
               

               
Cow position:
               
chr17:4472988-4472777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
50-281
               

               
Cow position:
               
chr17:966922-966694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
58, 174
               

               
Conread position:
               
50-282
               

               
Cow position:
               
chr17:26224334-26224562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr17:11056557-11056315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr17:242453-242696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr17:18884532-18884272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr17:25141277-25141502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
50-291
               

               
Cow position:
               
chr17:20835410-20835643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
50-291
               

               
Cow position:
               
chr17:21207318-21207079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 108
               

               
Conread position:
               
50-292
               

               
Cow position:
               
chr17:9079369-9079141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
209, 53
               

               
Conread position:
               
50-293
               

               
Cow position:
               
chr17:27765098-27765336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
141, 58
               

               
Conread position:
               
50-294
               

               
Cow position:
               
chr17:18929259-18929038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
208, 47
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr17:10649666-10649895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
141, 149
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr17:24761409-24761162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
61, 102
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr17:27305975-27306226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
50-300
               

               
Cow position:
               
chr17:9778068-9778315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
50-300
               

               
Cow position:
               
chr17:33290994-33290739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
50-301
               

               
Cow position:
               
chr17:20800633-20800886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 198
               

               
Conread position:
               
50-301
               

               
Cow position:
               
chr17:32279090-32278835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 200
               

               
Conread position:
               
50-302
               

               
Cow position:
               
chr17:17222159-17222414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 118
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr17:1275336-1275603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 156
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr17:5733631-5733391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
209, 61
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr17:28539854-28540107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 35
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr17:32366101-32366367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 107
               

               
Conread position:
               
50-310
               

               
Cow position:
               
chr17:15333894-15333628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
50-311
               

               
Cow position:
               
chr17:12059274-12059010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr17:5730740-5731006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
42, 92
               

               
Conread position:
               
50-319
               

               
Cow position:
               
chr17:27679427-27679141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 160
               

               
Conread position:
               
50-319
               

               
Cow position:
               
chr17:36454947-36454690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr17:34948458-34948726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 128
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr17:7132638-7132346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
56, 287
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr17:16446612-16446340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:2810438-2810730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:10528924-10528630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:11278215-11277930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:11618397-11618682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
54, 96
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:14033827-14033544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:20889191-20889469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 137
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:21335881-21335594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:21434912-21434633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:24490338-24490639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:25541996-25541719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
54, 100
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:25796523-25796239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
54, 202
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:25815426-25815702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 55
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:26230756-26231052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
58, 164
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:30665089-30665370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 154
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:34079281-34079013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:34316892-34316619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
58, 118
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:37480176-37479904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
61, 163
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:37482262-37481971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 195
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:38614773-38615058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
62, 155
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr17:38646881-38647159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 99
               

               
Conread position:
               
50-338
               

               
Cow position:
               
chr17:33271862-33271573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 44
               

               
Conread position:
               
50-349
               

               
Cow position:
               
chr17:23063529-23063841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 155
               

               
Conread position:
               
50-350
               

               
Cow position:
               
chr17:41892251-41891933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
50-351
               

               
Cow position:
               
chr17:3781862-3782172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 103
               

               
Conread position:
               
50-358
               

               
Cow position:
               
chr17:20090804-20090501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
50-360
               

               
Cow position:
               
chr17:29363546-29363223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 87
               

               
Conread position:
               
50-361
               

               
Cow position:
               
chr17:3503403-3503720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
144, 102
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr17:6566288-6566621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr17:11156676-11156354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr17:14848706-14848406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 97
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr17:21755624-21755295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
58, 210
               

               
Conread position:
               
50-364
               

               
Cow position:
               
chr17:20780327-20780657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
50-365
               

               
Cow position:
               
chr17:11281289-11280957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
50-365
               

               
Cow position:
               
chr17:38832859-38833186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr17:6624075-6624379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 151
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr17:8079134-8079456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr17:9746335-9746656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr17:11172798-11172472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 53
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr17:18592257-18592586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr17:21739067-21738730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 161
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr17:27047980-27048299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr17:1063006-1063319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr17:24004211-24004518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
246, 48
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr17:9911580-9911905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 115
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr17:11216066-11215747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 59
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr17:11664774-11664434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
51, 106
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr17:17405955-17406283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
61, 104
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr17:20072258-20071951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
245, 61
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr17:24824069-24824390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr17:24973768-24974093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 104
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr17:25611910-25612238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr17:26764830-26765171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 107
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr17:35126531-35126852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
143, 64
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr17:40331582-40331912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
54, 174
               

               
Conread position:
               
50-371
               

               
Cow position:
               
chr17:5006674-5006339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr17:9117460-9117796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr17:9853803-9854128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr17:12220121-12219787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr17:17059256-17059575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
190, 61
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr17:18472993-18473315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 109
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr17:20022700-20022362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr17:21004014-21003677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
54, 106
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr17:21293228-21292896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 88
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr17:22806724-22806391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr17:24553821-24554149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr17:30359295-30359610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
97, 40
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr17:40289187-40288848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
50-378
               

               
Cow position:
               
chr17:2662226-2662580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
58, 169
               

               
Conread position:
               
50-380
               

               
Cow position:
               
chr17:5514576-5514913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
50-380
               

               
Cow position:
               
chr17:20993222-20992885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 152
               

               
Conread position:
               
50-381
               

               
Cow position:
               
chr17:20848347-20848681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 88
               

               
Conread position:
               
50-381
               

               
Cow position:
               
chr17:36331149-36330800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
50-385
               

               
Cow position:
               
chr17:21495192-21495534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
50-393
               

               
Cow position:
               
chr17:1493338-1492979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
50-393
               

               
Cow position:
               
chr17:16371068-16371429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
56, 192
               

               
Conread position:
               
50-394
               

               
Cow position:
               
chr17:908563-908913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
50-395
               

               
Cow position:
               
chr17:5898708-5898353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 127
               

               
Conread position:
               
50-399
               

               
Cow position:
               
chr17:24773500-24773855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
50-400
               

               
Cow position:
               
chr17:5767731-5768079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
50-400
               

               
Cow position:
               
chr17:24587435-24587803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-418
               

               
Cow position:
               
chr17:13143873-13143502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
50-425
               

               
Cow position:
               
chr17:5423255-5422852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
50-428
               

               
Cow position:
               
chr17:5688531-5688163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 46
               

               
Conread position:
               
50-433
               

               
Cow position:
               
chr17:21312988-21312623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr17:5224220-5224613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr17:11101977-11101582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr17:27429395-27429792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr17:6423577-6423993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 114
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr17:20234044-20234435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr17:21243970-21243570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr17:26818636-26818233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 109
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr17:29292550-29292151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 99
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr17:30539430-30539060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 88
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr17:33933920-33933509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
141, 58
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr17:40421485-40421883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 119
               

               
Conread position:
               
50-446
               

               
Cow position:
               
chr17:32471977-32471543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
50-446
               

               
Cow position:
               
chr17:32554209-32553803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
50-463
               

               
Cow position:
               
chr17:7760646-7760243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 78
               

               
Conread position:
               
50-464
               

               
Cow position:
               
chr17:29715369-29714965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
64, 103
               

               
Conread position:
               
50-467
               

               
Cow position:
               
chr17:12289598-12289156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
50-475
               

               
Cow position:
               
chr17:4601731-4601286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
50, 105
               

               
Conread position:
               
50-475
               

               
Cow position:
               
chr17:6936846-6936418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
58, 131
               

               
Conread position:
               
50-480
               

               
Cow position:
               
chr17:13922292-13922763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
50-482
               

               
Cow position:
               
chr17:4213573-4214004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
58, 108
               

               
Conread position:
               
50-483
               

               
Cow position:
               
chr17:27795465-27795929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
50-485
               

               
Cow position:
               
chr17:15664486-15664938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
55, 154
               

               
Conread position:
               
50-507
               

               
Cow position:
               
chr17:18860902-18860437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 91
               

               
Conread position:
               
50-513
               

               
Cow position:
               
chr17:31481228-31480740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 162
               

               
Conread position:
               
50-515
               

               
Cow position:
               
chr17:8544123-8544599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 196
               

               
Conread position:
               
50-518
               

               
Cow position:
               
chr17:18720631-18720147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
104, 53
               

               
Conread position:
               
51-403
               

               
Cow position:
               
chr17:24077220-24077581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
51-441
               

               
Cow position:
               
chr17:12946548-12946117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
52-240
               

               
Cow position:
               
chr17:4606786-4606967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 86
               

               
Conread position:
               
52-370
               

               
Cow position:
               
chr17:25901014-25901348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
52-476
               

               
Cow position:
               
chr17:7697872-7698306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 128
               

               
Conread position:
               
53-199
               

               
Cow position:
               
chr17:12054539-12054690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
58, 141
               

               
Conread position:
               
53-221
               

               
Cow position:
               
chr17:3518432-3518260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
81, 148
               

               
Conread position:
               
53-221
               

               
Cow position:
               
chr17:4436411-4436240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
53-267
               

               
Cow position:
               
chr17:9697881-9697663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
53-270
               

               
Cow position:
               
chr17:5896091-5895869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 150
               

               
Conread position:
               
53-283
               

               
Cow position:
               
chr17:5246715-5246948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
54, 138
               

               
Conread position:
               
53-287
               

               
Cow position:
               
chr17:20358698-20358924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
53-287
               

               
Cow position:
               
chr17:21031605-21031845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
57, 147
               

               
Conread position:
               
53-294
               

               
Cow position:
               
chr17:34208000-34207750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
51, 102
               

               
Conread position:
               
53-295
               

               
Cow position:
               
chr17:3471241-3471485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 184
               

               
Conread position:
               
53-295
               

               
Cow position:
               
chr17:20912717-20912954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
53-313
               

               
Cow position:
               
chr17:24549989-24550266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
31, 157
               

               
Conread position:
               
53-320
               

               
Cow position:
               
chr17:1256684-1256408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 128
               

               
Conread position:
               
53-320
               

               
Cow position:
               
chr17:43141896-43141617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
53-351
               

               
Cow position:
               
chr17:31231294-31230994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
53-362
               

               
Cow position:
               
chr17:33052683-33052991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
139, 146
               

               
Conread position:
               
53-366
               

               
Cow position:
               
chr17:8690620-8690308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 148
               

               
Conread position:
               
53-411
               

               
Cow position:
               
chr17:923698-924075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 75
               

               
Conread position:
               
53-433
               

               
Cow position:
               
chr17:5000756-5000367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
53-434
               

               
Cow position:
               
chr17:3577358-3577762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 102
               

               
Conread position:
               
53-438
               

               
Cow position:
               
chr17:9565129-9565503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
53-471
               

               
Cow position:
               
chr17:32989312-32989730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
204, 46
               

               
Conread position:
               
53-472
               

               
Cow position:
               
chr17:32993794-32993369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
67, 46
               

               
Conread position:
               
53-483
               

               
Cow position:
               
chr17:24787201-24786757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
55, 106
               

               
Conread position:
               
53-503
               

               
Cow position:
               
chr17:21973313-21972847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 86
               

               
Conread position:
               
53-507
               

               
Cow position:
               
chr17:32027642-32027163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
55, 156
               

               
Conread position:
               
54-196
               

               
Cow position:
               
chr17:3442847-3442700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
50, 96
               

               
Conread position:
               
54-214
               

               
Cow position:
               
chr17:3182764-3182599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
54-285
               

               
Cow position:
               
chr17:40892970-40893207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 148
               

               
Conread position:
               
54-301
               

               
Cow position:
               
chr17:26183043-26183301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
54-313
               

               
Cow position:
               
chr17:21628303-21628562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr17:29472296-29472564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
200, 71
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr17:34595760-34596038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
54-330
               

               
Cow position:
               
chr17:7648041-7648314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
138, 71
               

               
Conread position:
               
54-362
               

               
Cow position:
               
chr17:40741468-40741791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 195
               

               
Conread position:
               
54-365
               

               
Cow position:
               
chr17:30718598-30718275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 167
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr17:22564004-22564328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 284
               

               
Conread position:
               
54-370
               

               
Cow position:
               
chr17:32138579-32138276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
206, 39
               

               
Conread position:
               
54-378
               

               
Cow position:
               
chr17:25097283-25097610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 102
               

               
Conread position:
               
54-400
               

               
Cow position:
               
chr17:32419297-32418937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
54-436
               

               
Cow position:
               
chr17:33275925-33275522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 68
               

               
Conread position:
               
54-444
               

               
Cow position:
               
chr17:42419552-42419950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
204, 55
               

               
Conread position:
               
54-470
               

               
Cow position:
               
chr17:31232109-31231685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
69, 245
               

               
Conread position:
               
55-188
               

               
Cow position:
               
chr17:27162474-27162613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
55-287
               

               
Cow position:
               
chr17:21697554-21697789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 187
               

               
Conread position:
               
55-295
               

               
Cow position:
               
chr17:25590414-25590168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
52, 99
               

               
Conread position:
               
55-302
               

               
Cow position:
               
chr17:25608684-25608434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
41, 199
               

               
Conread position:
               
55-323
               

               
Cow position:
               
chr17:38200943-38200668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 184
               

               
Conread position:
               
55-362
               

               
Cow position:
               
chr17:41029775-41030078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
44, 149
               

               
Conread position:
               
55-394
               

               
Cow position:
               
chr17:25128527-25128180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
55-425
               

               
Cow position:
               
chr17:24580478-24580088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 102
               

               
Conread position:
               
55-429
               

               
Cow position:
               
chr17:20215993-20216378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr17:41290196-41289805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
56-326
               

               
Cow position:
               
chr17:12929720-12929433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 198
               

               
Conread position:
               
56-362
               

               
Cow position:
               
chr17:12590986-12591314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
56-374
               

               
Cow position:
               
chr17:4225668-4225352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
57-211
               

               
Cow position:
               
chr17:36268220-36268374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
58-190
               

               
Cow position:
               
chr17:16117603-16117462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
58-277
               

               
Cow position:
               
chr17:35311246-35311475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 127
               

               
Conread position:
               
58-285
               

               
Cow position:
               
chr17:21680593-21680829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 97
               

               
Conread position:
               
58-295
               

               
Cow position:
               
chr17:43323932-43323699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
134, 5
               

               
Conread position:
               
58-318
               

               
Cow position:
               
chr17:25999941-26000207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 96
               

               
Conread position:
               
58-326
               

               
Cow position:
               
chr17:11397491-11397764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 148
               

               
Conread position:
               
58-326
               

               
Cow position:
               
chr17:24149002-24149282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
48, 151
               

               
Conread position:
               
58-326
               

               
Cow position:
               
chr17:25189104-25189383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 153
               

               
Conread position:
               
58-375
               

               
Cow position:
               
chr17:18109261-18108935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 145
               

               
Conread position:
               
58-431
               

               
Cow position:
               
chr17:2034370-2034731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 55
               

               
Conread position:
               
58-487
               

               
Cow position:
               
chr17:15684330-15684775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
40, 92
               

               
Conread position:
               
59-302
               

               
Cow position:
               
chr17:17121504-17121745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
59-505
               

               
Cow position:
               
chr17:27058728-27058281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
64-295
               

               
Cow position:
               
chr17:26881506-26881269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
64-295
               

               
Cow position:
               
chr17:32950103-32950341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 140
               

               
Conread position:
               
64-301
               

               
Cow position:
               
chr17:44232888-44232639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
44, 151
               

               
Conread position:
               
64-305
               

               
Cow position:
               
chr17:12447568-12447324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 63
               

               
Conread position:
               
64-320
               

               
Cow position:
               
chr17:30529705-30529453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
64-362
               

               
Cow position:
               
chr17:15340906-15340612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
196, 50
               

               
Conread position:
               
64-366
               

               
Cow position:
               
chr17:20083681-20083383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
64-366
               

               
Cow position:
               
chr17:20990363-20990046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
64-370
               

               
Cow position:
               
chr17:20932160-20932479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
64-370
               

               
Cow position:
               
chr17:24821697-24822009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
64-394
               

               
Cow position:
               
chr17:1634651-1634319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
64-426
               

               
Cow position:
               
chr17:21115117-21114746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
64-435
               

               
Cow position:
               
chr17:11296466-11296875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 143
               

               
Conread position:
               
64-438
               

               
Cow position:
               
chr17:7614540-7614157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
64-534
               

               
Cow position:
               
chr17:15103057-15102578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
40, 93
               

               
Conread position:
               
65-287
               

               
Cow position:
               
chr17:30734447-30734236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 36
               

               
Conread position:
               
65-295
               

               
Cow position:
               
chr17:33411187-33410949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
65-320
               

               
Cow position:
               
chr17:21918042-21917781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 138
               

               
Conread position:
               
66-366
               

               
Cow position:
               
chr17:29356386-29356096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
193, 56
               

               
Conread position:
               
66-370
               

               
Cow position:
               
chr17:23246043-23246346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
66-399
               

               
Cow position:
               
chr17:12306563-12306221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
66-441
               

               
Cow position:
               
chr17:38363141-38362771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 59
               

               
Conread position:
               
67-497
               

               
Cow position:
               
chr17:17683064-17682640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
69-326
               

               
Cow position:
               
chr17:20033080-20032814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 171
               

               
Conread position:
               
69-370
               

               
Cow position:
               
chr17:4106150-4105846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
69-370
               

               
Cow position:
               
chr17:4121886-4121582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
69-489
               

               
Cow position:
               
chr17:21959847-21959417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
70-295
               

               
Cow position:
               
chr17:44147139-44146908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 137
               

               
Conread position:
               
71-295
               

               
Cow position:
               
chr17:21298062-21298298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 137
               

               
Conread position:
               
71-362
               

               
Cow position:
               
chr17:6848644-6848934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
71-370
               

               
Cow position:
               
chr17:1562936-1562639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
71-438
               

               
Cow position:
               
chr17:7142702-7143096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 137
               

               
Conread position:
               
71-468
               

               
Cow position:
               
chr17:14026078-14025661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 330
               

               
Conread position:
               
72-212
               

               
Cow position:
               
chr17:20905382-20905522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
72-284
               

               
Cow position:
               
chr17:1353235-1353452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
72-284
               

               
Cow position:
               
chr17:27463985-27464198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 151
               

               
Conread position:
               
72-462
               

               
Cow position:
               
chr17:25916731-25917149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
36, 175
               

               
Conread position:
               
74-235
               

               
Cow position:
               
chr17:38613087-38613253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 129
               

               
Conread position:
               
74-374
               

               
Cow position:
               
chr17:13244190-13243898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
117, 51
               

               
Conread position:
               
74-490
               

               
Cow position:
               
chr17:28467977-28468399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
75-326
               

               
Cow position:
               
chr17:14762277-14762024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
75-326
               

               
Cow position:
               
chr17:21599844-21599585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 135
               

               
Conread position:
               
76-487
               

               
Cow position:
               
chr17:18146025-18146454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 129
               

               
Conread position:
               
78-375
               

               
Cow position:
               
chr17:39736030-39736327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
164, 70
               

               
Conread position:
               
79-326
               

               
Cow position:
               
chr17:24559145-24559388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
83-254
               

               
Cow position:
               
chr17:10222533-10222360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
19, 121
               

               
Conread position:
               
83-267
               

               
Cow position:
               
chr17:484453-484636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
83-287
               

               
Cow position:
               
chr17:5382136-5381936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
83-308
               

               
Cow position:
               
chr17:267734-267505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 125
               

               
Conread position:
               
83-370
               

               
Cow position:
               
chr17:31037530-31037229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
85-326
               

               
Cow position:
               
chr17:14003669-14003923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
85-362
               

               
Cow position:
               
chr17:17410145-17410433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 115
               

               
Conread position:
               
86-400
               

               
Cow position:
               
chr17:6328961-6329292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 282
               

               
Conread position:
               
87-366
               

               
Cow position:
               
chr17:20874249-20874540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
87-435
               

               
Cow position:
               
chr17:23147285-23147635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 67
               

               
Conread position:
               
95-326
               

               
Cow position:
               
chr17:9966162-9965929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
103, 134
               

               
Conread position:
               
97-246
               

               
Cow position:
               
chr17:20928783-20928932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
97, 8
               

               
Conread position:
               
97-287
               

               
Cow position:
               
chr17:11921414-11921216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
98-326
               

               
Cow position:
               
chr17:7803302-7803077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
98-326
               

               
Cow position:
               
chr17:14060906-14060676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
98-369
               

               
Cow position:
               
chr17:11962680-11962388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
48, 284
               

               
Conread position:
               
98-378
               

               
Cow position:
               
chr17:37699488-37699194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
99-370
               

               
Cow position:
               
chr17:25514254-25513975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
103-320
               

               
Cow position:
               
chr17:27184066-27183851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
103-492
               

               
Cow position:
               
chr17:32348948-32349332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 48
               

               
Conread position:
               
103-508
               

               
Cow position:
               
chr17:20884397-20884810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 48
               

               
Conread position:
               
104-301
               

               
Cow position:
               
chr17:32280544-32280737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
104-312
               

               
Cow position:
               
chr17:26233951-26233746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
104-326
               

               
Cow position:
               
chr17:1113760-1113986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 130
               

               
Conread position:
               
104-326
               

               
Cow position:
               
chr17:45881779-45881999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
106-306
               

               
Cow position:
               
chr17:17267012-17266813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
86, 29
               

               
Conread position:
               
108-438
               

               
Cow position:
               
chr17:20335543-20335885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
109-370
               

               
Cow position:
               
chr17:33658190-33657921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
112-371
               

               
Cow position:
               
chr17:31856546-31856820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 255
               

               
Conread position:
               
112-399
               

               
Cow position:
               
chr17:25594820-25594515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
112-435
               

               
Cow position:
               
chr17:1040629-1040964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
113-440
               

               
Cow position:
               
chr17:7654568-7654247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
114-295
               

               
Cow position:
               
chr17:4786609-4786431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
114-369
               

               
Cow position:
               
chr17:25501995-25502257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
114-434
               

               
Cow position:
               
chr17:23563904-23563577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
115-320
               

               
Cow position:
               
chr17:23798168-23798373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
115-362
               

               
Cow position:
               
chr17:34751514-34751266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
116-366
               

               
Cow position:
               
chr17:11215342-11215088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
118-301
               

               
Cow position:
               
chr17:1311237-1311423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
118-438
               

               
Cow position:
               
chr17:25616148-25616484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
177, 33
               

               
Conread position:
               
120-366
               

               
Cow position:
               
chr17:11832228-11831971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
121-273
               

               
Cow position:
               
chr17:1505202-1505357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
122-287
               

               
Cow position:
               
chr17:20305941-20306108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
124-379
               

               
Cow position:
               
chr17:21758251-21757984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr17:10561527-10561762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
127-491
               

               
Cow position:
               
chr17:21325231-21325598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
132-438
               

               
Cow position:
               
chr17:3353784-3354108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
140-362
               

               
Cow position:
               
chr17:27203133-27202906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
140-364
               

               
Cow position:
               
chr17:21489713-21489484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
140-366
               

               
Cow position:
               
chr17:10432065-10431830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
140-401
               

               
Cow position:
               
chr17:23517031-23516764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
146-326
               

               
Cow position:
               
chr17:36814276-36814459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
149-437
               

               
Cow position:
               
chr17:2275394-2275686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
45, 86
               

               
Conread position:
               
152-366
               

               
Cow position:
               
chr17:22057100-22056884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
107, 42
               

               
Conread position:
               
152-374
               

               
Cow position:
               
chr17:29025990-29026224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
153-301
               

               
Cow position:
               
chr17:1466506-1466355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 133
               

               
Conread position:
               
153-362
               

               
Cow position:
               
chr17:11368927-11368710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
153-374
               

               
Cow position:
               
chr17:17193417-17193637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
153-434
               

               
Cow position:
               
chr17:1469300-1469601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
153-438
               

               
Cow position:
               
chr17:40406367-40406662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
155-360
               

               
Cow position:
               
chr17:21922696-21922496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
103, 34
               

               
Conread position:
               
159-394
               

               
Cow position:
               
chr17:9824598-9824839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
159-483
               

               
Cow position:
               
chr17:36864560-36864903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
173-366
               

               
Cow position:
               
chr17:16158434-16158635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
173-371
               

               
Cow position:
               
chr17:7590514-7590314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
176-394
               

               
Cow position:
               
chr17:37816242-37816024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
181-438
               

               
Cow position:
               
chr17:25126303-25126583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
182-517
               

               
Cow position:
               
chr17:22017135-22016795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
197-366
               

               
Cow position:
               
chr17:27303990-27303825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
128, 40
               

               
Conread position:
               
197-366
               

               
Cow position:
               
chr17:28814531-28814349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
202-438
               

               
Cow position:
               
chr17:7567421-7567188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 41
               

               
Conread position:
               
203-471
               

               
Cow position:
               
chr17:40384230-40383957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
204-358
               

               
Cow position:
               
chr17:7577565-7577733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
208-351
               

               
Cow position:
               
chr17:7851066-7851216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
227-445
               

               
Cow position:
               
chr17:25169075-25169296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 127
               

               
Conread position:
               
240-438
               

               
Cow position:
               
chr17:12288804-12289013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
244-469
               

               
Cow position:
               
chr17:12342467-12342232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
245-437
               

               
Cow position:
               
chr17:10052279-10052089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
245-438
               

               
Cow position:
               
chr17:3620070-3619867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
246-435
               

               
Cow position:
               
chr17:10769495-10769293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
326-457
               

               
Cow position:
               
chr17:42675923-42675783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 132
               

               
Conread position:
               
368-500
               

               
Cow position:
               
chr17:21718828-21718696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.