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Cow genome map

           
Conread name:
           
Ss1.1-rfce22c_a4.5
        

               
Conread position:
               
5-215
               

               
Cow position:
               
chr23:5870463-5870232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr23:670355-670647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr23:4726519-4726897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
22-229
               

               
Cow position:
               
chr23:6158469-6158259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
22-326
               

               
Cow position:
               
chr23:40502768-40502455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
20, 164
               

               
Conread position:
               
22-374
               

               
Cow position:
               
chr23:34356395-34356754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
24-366
               

               
Cow position:
               
chr23:6995230-6994877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
26-500
               

               
Cow position:
               
chr23:4968778-4968284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
16, 223
               

               
Conread position:
               
44-326
               

               
Cow position:
               
chr23:25675923-25675640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 123
               

               
Conread position:
               
47-284
               

               
Cow position:
               
chr23:10852827-10853072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
48-326
               

               
Cow position:
               
chr23:16631042-16631329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
48-370
               

               
Cow position:
               
chr23:30662853-30662529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
6, 99
               

               
Conread position:
               
50-154
               

               
Cow position:
               
chr23:35366321-35366212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
50-154
               

               
Cow position:
               
chr23:35369233-35369124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
50-186
               

               
Cow position:
               
chr23:28118325-28118182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
50-188
               

               
Cow position:
               
chr23:29742163-29742303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
50-190
               

               
Cow position:
               
chr23:3910228-3910081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
50-223
               

               
Cow position:
               
chr23:26741672-26741498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr23:2316583-2316768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr23:36199071-36199261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 88
               

               
Conread position:
               
50-239
               

               
Cow position:
               
chr23:26319195-26319389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
50-246
               

               
Cow position:
               
chr23:21343472-21343273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
50-246
               

               
Cow position:
               
chr23:37992767-37992963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
61, 149
               

               
Conread position:
               
50-249
               

               
Cow position:
               
chr23:1991649-1991450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
67, 77
               

               
Conread position:
               
50-250
               

               
Cow position:
               
chr23:2259822-2259610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
50, 108
               

               
Conread position:
               
50-256
               

               
Cow position:
               
chr23:344400-344185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-257
               

               
Cow position:
               
chr23:12896823-12896616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 128
               

               
Conread position:
               
50-262
               

               
Cow position:
               
chr23:25189119-25189340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
50-267
               

               
Cow position:
               
chr23:39309337-39309118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
50-269
               

               
Cow position:
               
chr23:20980623-20980839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
190, 68
               

               
Conread position:
               
50-277
               

               
Cow position:
               
chr23:32961591-32961353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
55, 159
               

               
Conread position:
               
50-280
               

               
Cow position:
               
chr23:38854956-38854722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr23:14191327-14191570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr23:18367473-18367716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
51, 157
               

               
Conread position:
               
50-290
               

               
Cow position:
               
chr23:808944-809184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
50-290
               

               
Cow position:
               
chr23:1321416-1321185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
209, 99
               

               
Conread position:
               
50-292
               

               
Cow position:
               
chr23:4338829-4338586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
50-301
               

               
Cow position:
               
chr23:15056864-15056608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
57, 99
               

               
Conread position:
               
50-301
               

               
Cow position:
               
chr23:36129124-36128878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
50-302
               

               
Cow position:
               
chr23:1670694-1670938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
148, 53
               

               
Conread position:
               
50-302
               

               
Cow position:
               
chr23:3208841-3208584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr23:39806650-39806911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 60
               

               
Conread position:
               
50-306
               

               
Cow position:
               
chr23:6720499-6720241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr23:33695997-33695726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 137
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr23:41472387-41472667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr23:1605001-1605280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
49, 157
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr23:4980766-4980494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 102
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr23:32309459-32309737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 150
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr23:1254455-1254741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
48, 91
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr23:1647406-1647672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
142, 64
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr23:8006018-8006297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 154
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr23:9595050-9594782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 21
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr23:29626192-29626470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
50-322
               

               
Cow position:
               
chr23:19979169-19978898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr23:7175398-7175667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
54, 128
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr23:7402484-7402758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 87
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr23:4972561-4972825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
33, 141
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr23:5162210-5162489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr23:11129012-11129293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 91
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr23:18698247-18697966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 216
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr23:19758845-19758570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
50, 79
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr23:31601680-31601391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
54, 209
               

               
Conread position:
               
50-327
               

               
Cow position:
               
chr23:4579257-4578978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 103
               

               
Conread position:
               
50-335
               

               
Cow position:
               
chr23:28053055-28053341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
50-347
               

               
Cow position:
               
chr23:25378433-25378733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
50-352
               

               
Cow position:
               
chr23:4996310-4996008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
126, 13
               

               
Conread position:
               
50-358
               

               
Cow position:
               
chr23:4562661-4562983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
50-361
               

               
Cow position:
               
chr23:6223778-6224074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
244, 68
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr23:1924059-1923735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 104
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr23:4529114-4528777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
56, 329
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr23:9734192-9734510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 153
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr23:10554234-10553907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 108
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr23:11045262-11045588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 81
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr23:14739226-14739550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
50-365
               

               
Cow position:
               
chr23:33601746-33601432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 149
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr23:1398260-1397933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 190
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr23:1885398-1885067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 203
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr23:5723321-5723640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 153
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr23:10085405-10085085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr23:13555650-13555334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 116
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr23:14164622-14164289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr23:16700261-16699936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 188
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr23:21336711-21336378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr23:27544610-27544933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 100
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr23:34416350-34416662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr23:6244809-6244488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr23:9599280-9599603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
190, 58
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr23:11473731-11473395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr23:13511511-13511835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr23:22298239-22297929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr23:24509480-24509796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr23:5706778-5707107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
64, 103
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr23:6592916-6592593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr23:7596553-7596240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr23:13599119-13599454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr23:15742877-15743204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 47
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr23:20195140-20194811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
57, 88
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr23:29034091-29034428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
57, 107
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr23:33717766-33717429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr23:38208488-38208840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
50-380
               

               
Cow position:
               
chr23:1337526-1337190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
50-380
               

               
Cow position:
               
chr23:16583131-16582790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
50-394
               

               
Cow position:
               
chr23:534007-534362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
50-394
               

               
Cow position:
               
chr23:18402508-18402156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
77, 179
               

               
Conread position:
               
50-399
               

               
Cow position:
               
chr23:13520235-13520590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
50-400
               

               
Cow position:
               
chr23:20057089-20056740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
50-402
               

               
Cow position:
               
chr23:6367383-6367741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
50-403
               

               
Cow position:
               
chr23:20558081-20557703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 165
               

               
Conread position:
               
50-403
               

               
Cow position:
               
chr23:26632577-26632948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
50-406
               

               
Cow position:
               
chr23:15710300-15709931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
50-415
               

               
Cow position:
               
chr23:11315239-11314877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
179, 61
               

               
Conread position:
               
50-425
               

               
Cow position:
               
chr23:5603493-5603109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 110
               

               
Conread position:
               
50-425
               

               
Cow position:
               
chr23:19002291-19001899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
42, 200
               

               
Conread position:
               
50-425
               

               
Cow position:
               
chr23:36309203-36309574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 99
               

               
Conread position:
               
50-434
               

               
Cow position:
               
chr23:10416645-10416231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 176
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr23:14838958-14838563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
144, 99
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr23:26948968-26949389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
51, 162
               

               
Conread position:
               
50-437
               

               
Cow position:
               
chr23:22530640-22530237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
58, 118
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr23:29242724-29243133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 157
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr23:40891138-40891545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 97
               

               
Conread position:
               
50-442
               

               
Cow position:
               
chr23:1883171-1883598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
50-446
               

               
Cow position:
               
chr23:22674661-22674234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 148
               

               
Conread position:
               
50-452
               

               
Cow position:
               
chr23:9652689-9652294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
50-455
               

               
Cow position:
               
chr23:22396668-22396239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
56, 149
               

               
Conread position:
               
50-464
               

               
Cow position:
               
chr23:7845067-7845500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
50-470
               

               
Cow position:
               
chr23:15287356-15286917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 150
               

               
Conread position:
               
50-484
               

               
Cow position:
               
chr23:8063332-8063777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
50-491
               

               
Cow position:
               
chr23:26986496-26986042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
50-495
               

               
Cow position:
               
chr23:28206389-28206830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
50-524
               

               
Cow position:
               
chr23:186949-187442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
46, 112
               

               
Conread position:
               
50-530
               

               
Cow position:
               
chr23:41348871-41348347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
51-286
               

               
Cow position:
               
chr23:1068534-1068297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
52-241
               

               
Cow position:
               
chr23:1489836-1490025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 47
               

               
Conread position:
               
52-269
               

               
Cow position:
               
chr23:406381-406170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
190, 93
               

               
Conread position:
               
52-312
               

               
Cow position:
               
chr23:8959376-8959641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 131
               

               
Conread position:
               
52-323
               

               
Cow position:
               
chr23:40648947-40648675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
56, 7
               

               
Conread position:
               
52-433
               

               
Cow position:
               
chr23:4504607-4505008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
52-433
               

               
Cow position:
               
chr23:20996252-20996633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
139, 56
               

               
Conread position:
               
53-218
               

               
Cow position:
               
chr23:3727621-3727445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
53-219
               

               
Cow position:
               
chr23:4421196-4421031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
115, 62
               

               
Conread position:
               
53-233
               

               
Cow position:
               
chr23:361129-360950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
53-284
               

               
Cow position:
               
chr23:27862112-27862346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 153
               

               
Conread position:
               
53-290
               

               
Cow position:
               
chr23:41285710-41285942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
53-301
               

               
Cow position:
               
chr23:16664769-16664535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
184, 39
               

               
Conread position:
               
53-322
               

               
Cow position:
               
chr23:40778043-40778320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
55, 154
               

               
Conread position:
               
53-370
               

               
Cow position:
               
chr23:31493659-31493974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
200, 58
               

               
Conread position:
               
53-375
               

               
Cow position:
               
chr23:25669289-25668978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
206, 55
               

               
Conread position:
               
53-394
               

               
Cow position:
               
chr23:38455404-38455045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
53-400
               

               
Cow position:
               
chr23:1536108-1536462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 146
               

               
Conread position:
               
53-405
               

               
Cow position:
               
chr23:26795123-26794772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
53-437
               

               
Cow position:
               
chr23:1878090-1877697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
53-438
               

               
Cow position:
               
chr23:2055483-2055861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
54-237
               

               
Cow position:
               
chr23:5617358-5617547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
54-282
               

               
Cow position:
               
chr23:33233126-33232893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
54-286
               

               
Cow position:
               
chr23:5151770-5152012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 131
               

               
Conread position:
               
54-302
               

               
Cow position:
               
chr23:29471337-29471096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 57
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr23:12050147-12050416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
53, 140
               

               
Conread position:
               
54-357
               

               
Cow position:
               
chr23:22804505-22804821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 186
               

               
Conread position:
               
54-365
               

               
Cow position:
               
chr23:37065619-37065954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 154
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr23:39775512-39775831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 102
               

               
Conread position:
               
54-370
               

               
Cow position:
               
chr23:27563927-27563596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
52, 174
               

               
Conread position:
               
54-399
               

               
Cow position:
               
chr23:21452951-21452592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
47, 101
               

               
Conread position:
               
54-467
               

               
Cow position:
               
chr23:18322638-18322223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 91
               

               
Conread position:
               
54-488
               

               
Cow position:
               
chr23:2502067-2501620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 95
               

               
Conread position:
               
55-256
               

               
Cow position:
               
chr23:587178-587388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
55-287
               

               
Cow position:
               
chr23:29801215-29801450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 194
               

               
Conread position:
               
55-302
               

               
Cow position:
               
chr23:11380475-11380219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 183
               

               
Conread position:
               
55-314
               

               
Cow position:
               
chr23:3918315-3918049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 148
               

               
Conread position:
               
55-366
               

               
Cow position:
               
chr23:10014328-10014632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
55-370
               

               
Cow position:
               
chr23:1290077-1290407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
55-370
               

               
Cow position:
               
chr23:20744806-20744486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
56, 96
               

               
Conread position:
               
55-436
               

               
Cow position:
               
chr23:20388856-20388467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
55-437
               

               
Cow position:
               
chr23:40781109-40781513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
55-461
               

               
Cow position:
               
chr23:21659720-21660144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
55-498
               

               
Cow position:
               
chr23:19636481-19636020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 132
               

               
Conread position:
               
56-287
               

               
Cow position:
               
chr23:32105656-32105889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
58-311
               

               
Cow position:
               
chr23:4608596-4608336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
48, 86
               

               
Conread position:
               
58-370
               

               
Cow position:
               
chr23:29459303-29458989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
58-435
               

               
Cow position:
               
chr23:5389488-5389878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
58-442
               

               
Cow position:
               
chr23:18902265-18901861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 99
               

               
Conread position:
               
59-238
               

               
Cow position:
               
chr23:4523192-4523008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 142
               

               
Conread position:
               
59-301
               

               
Cow position:
               
chr23:3955208-3955452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
87, 42
               

               
Conread position:
               
59-381
               

               
Cow position:
               
chr23:20435264-20434943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
45, 63
               

               
Conread position:
               
59-471
               

               
Cow position:
               
chr23:24704066-24704501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 146
               

               
Conread position:
               
59-510
               

               
Cow position:
               
chr23:3247375-3247838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
60-435
               

               
Cow position:
               
chr23:21764705-21765096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
62-326
               

               
Cow position:
               
chr23:3191334-3191065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
63-320
               

               
Cow position:
               
chr23:33711557-33711814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
128, 84
               

               
Conread position:
               
63-364
               

               
Cow position:
               
chr23:33940364-33940054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 102
               

               
Conread position:
               
64-238
               

               
Cow position:
               
chr23:31739650-31739830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
41, 139
               

               
Conread position:
               
64-293
               

               
Cow position:
               
chr23:16563634-16563862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
64-362
               

               
Cow position:
               
chr23:1742149-1742455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
64-366
               

               
Cow position:
               
chr23:18296599-18296912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 140
               

               
Conread position:
               
64-366
               

               
Cow position:
               
chr23:22399193-22399511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
44, 93
               

               
Conread position:
               
64-367
               

               
Cow position:
               
chr23:3262707-3262391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
64-370
               

               
Cow position:
               
chr23:24867094-24867419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
64-379
               

               
Cow position:
               
chr23:1776839-1776523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 88
               

               
Conread position:
               
64-405
               

               
Cow position:
               
chr23:25864892-25864553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
64-436
               

               
Cow position:
               
chr23:1430002-1429634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
64-438
               

               
Cow position:
               
chr23:39752906-39753302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
65-287
               

               
Cow position:
               
chr23:4942310-4942091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 59
               

               
Conread position:
               
65-431
               

               
Cow position:
               
chr23:23409539-23409907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 66
               

               
Conread position:
               
65-447
               

               
Cow position:
               
chr23:29345967-29345566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 93
               

               
Conread position:
               
66-305
               

               
Cow position:
               
chr23:1803584-1803825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
67-326
               

               
Cow position:
               
chr23:11434461-11434200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 97
               

               
Conread position:
               
67-326
               

               
Cow position:
               
chr23:24930278-24930012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
44, 115
               

               
Conread position:
               
67-396
               

               
Cow position:
               
chr23:4646308-4646645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
68-236
               

               
Cow position:
               
chr23:5191328-5191487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
160, 35
               

               
Conread position:
               
68-433
               

               
Cow position:
               
chr23:35177113-35177498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 90
               

               
Conread position:
               
68-438
               

               
Cow position:
               
chr23:1636078-1636469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 132
               

               
Conread position:
               
69-374
               

               
Cow position:
               
chr23:1428613-1428923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
172, 80
               

               
Conread position:
               
70-234
               

               
Cow position:
               
chr23:30656377-30656208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
70-326
               

               
Cow position:
               
chr23:20248902-20248635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
70-326
               

               
Cow position:
               
chr23:29786555-29786286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 169
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr23:39028583-39028798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
123, 181
               

               
Conread position:
               
72-349
               

               
Cow position:
               
chr23:36017942-36018234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 132
               

               
Conread position:
               
73-302
               

               
Cow position:
               
chr23:1189101-1188873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
74-350
               

               
Cow position:
               
chr23:30999377-30999654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 85
               

               
Conread position:
               
75-438
               

               
Cow position:
               
chr23:38973649-38974036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 129
               

               
Conread position:
               
76-362
               

               
Cow position:
               
chr23:5426231-5426535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
78-350
               

               
Cow position:
               
chr23:19371265-19370985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
82-366
               

               
Cow position:
               
chr23:4104218-4104501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
83-360
               

               
Cow position:
               
chr23:21445927-21446216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
35, 122
               

               
Conread position:
               
84-503
               

               
Cow position:
               
chr23:39813321-39813744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 53
               

               
Conread position:
               
91-277
               

               
Cow position:
               
chr23:18107521-18107334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 110
               

               
Conread position:
               
92-326
               

               
Cow position:
               
chr23:40844473-40844710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 89
               

               
Conread position:
               
92-370
               

               
Cow position:
               
chr23:3282295-3282012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
93-357
               

               
Cow position:
               
chr23:9713141-9713413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
93-373
               

               
Cow position:
               
chr23:12334032-12334322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
97-415
               

               
Cow position:
               
chr23:1700998-1701324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 297
               

               
Conread position:
               
98-323
               

               
Cow position:
               
chr23:1921395-1921170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
100-295
               

               
Cow position:
               
chr23:26942272-26942470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 37
               

               
Conread position:
               
103-293
               

               
Cow position:
               
chr23:4804300-4804111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
103-326
               

               
Cow position:
               
chr23:5515802-5516029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
44, 98
               

               
Conread position:
               
103-326
               

               
Cow position:
               
chr23:33622317-33622090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 95
               

               
Conread position:
               
103-438
               

               
Cow position:
               
chr23:24984335-24983990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
104-326
               

               
Cow position:
               
chr23:7574796-7574565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
88, 94
               

               
Conread position:
               
104-326
               

               
Cow position:
               
chr23:12091523-12091301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 95
               

               
Conread position:
               
104-362
               

               
Cow position:
               
chr23:1767666-1767930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
104-376
               

               
Cow position:
               
chr23:23113865-23114140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
107-435
               

               
Cow position:
               
chr23:19774613-19774946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
107-480
               

               
Cow position:
               
chr23:32480197-32479792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 359
               

               
Conread position:
               
109-380
               

               
Cow position:
               
chr23:18416207-18415936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 121
               

               
Conread position:
               
112-320
               

               
Cow position:
               
chr23:33569983-33570188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
112-366
               

               
Cow position:
               
chr23:13945873-13946143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 136
               

               
Conread position:
               
112-380
               

               
Cow position:
               
chr23:38503270-38502988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
112-444
               

               
Cow position:
               
chr23:35938191-35938535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
112-453
               

               
Cow position:
               
chr23:35942059-35942408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
148, 87
               

               
Conread position:
               
113-326
               

               
Cow position:
               
chr23:4329836-4329615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 86
               

               
Conread position:
               
113-366
               

               
Cow position:
               
chr23:4966665-4966924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
82, 66
               

               
Conread position:
               
114-528
               

               
Cow position:
               
chr23:39083299-39083723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 75
               

               
Conread position:
               
115-326
               

               
Cow position:
               
chr23:349880-349663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 142
               

               
Conread position:
               
115-370
               

               
Cow position:
               
chr23:33153342-33153080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
116-370
               

               
Cow position:
               
chr23:21502789-21502521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
120, 35
               

               
Conread position:
               
118-394
               

               
Cow position:
               
chr23:5436794-5436510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
120-366
               

               
Cow position:
               
chr23:4335932-4336172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
138, 28
               

               
Conread position:
               
125-484
               

               
Cow position:
               
chr23:12363761-12363396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
127-438
               

               
Cow position:
               
chr23:26050895-26051221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
132-366
               

               
Cow position:
               
chr23:30950824-30951061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
141-374
               

               
Cow position:
               
chr23:36172395-36172637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
141-441
               

               
Cow position:
               
chr23:5732423-5732741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 10
               

               
Conread position:
               
150-438
               

               
Cow position:
               
chr23:1438178-1438479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
152-365
               

               
Cow position:
               
chr23:3245032-3244815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
152-366
               

               
Cow position:
               
chr23:306408-306628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
152-366
               

               
Cow position:
               
chr23:4327806-4327595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
40, 82
               

               
Conread position:
               
152-488
               

               
Cow position:
               
chr23:1655778-1656125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
153-498
               

               
Cow position:
               
chr23:307342-307695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 34
               

               
Conread position:
               
153-505
               

               
Cow position:
               
chr23:39573372-39572996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
154-435
               

               
Cow position:
               
chr23:283502-283204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
155-438
               

               
Cow position:
               
chr23:22414409-22414108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 6
               

               
Conread position:
               
156-366
               

               
Cow position:
               
chr23:39780644-39780860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
159-374
               

               
Cow position:
               
chr23:39275780-39276011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
160-438
               

               
Cow position:
               
chr23:6035333-6035610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
163-373
               

               
Cow position:
               
chr23:4795067-4795282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
164-293
               

               
Cow position:
               
chr23:8379032-8378905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
176-370
               

               
Cow position:
               
chr23:20002162-20002364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
184-395
               

               
Cow position:
               
chr23:21309495-21309279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
187-370
               

               
Cow position:
               
chr23:18822911-18823099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
190-444
               

               
Cow position:
               
chr23:11751207-11750947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
199-443
               

               
Cow position:
               
chr23:16961227-16961492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
202-355
               

               
Cow position:
               
chr23:1499553-1499394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
207-481
               

               
Cow position:
               
chr23:3909947-3909664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
212-362
               

               
Cow position:
               
chr23:3244522-3244367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
231-511
               

               
Cow position:
               
chr23:36082547-36082838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
57, 222
               

               
Conread position:
               
238-468
               

               
Cow position:
               
chr23:23904358-23904116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
23, 215
               

               
Conread position:
               
245-438
               

               
Cow position:
               
chr23:7696535-7696742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 179
               

               
Conread position:
               
245-446
               

               
Cow position:
               
chr23:6148058-6147844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
260-472
               

               
Cow position:
               
chr23:22272486-22272260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
262-508
               

               
Cow position:
               
chr23:12405825-12405565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
265-438
               

               
Cow position:
               
chr23:40081511-40081700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
275-441
               

               
Cow position:
               
chr23:5237412-5237235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 150
               

               
Conread position:
               
280-442
               

               
Cow position:
               
chr23:5461327-5461156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
370-540
               

               
Cow position:
               
chr23:2186929-2186757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               
Show alignments to all cow chromosomes.