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Cow genome map

           
Conread name:
           
Ss1.1-rfce22c_a4.5
        

               
Conread position:
               
1-437
               

               
Cow position:
               
chr25:26090091-26089632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr25:36124418-36124704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
5-279
               

               
Cow position:
               
chr25:27868530-27868811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
5-438
               

               
Cow position:
               
chr25:9055925-9056351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
12-243
               

               
Cow position:
               
chr25:26112007-26112241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 116
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr25:448424-448154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
181, 17
               

               
Conread position:
               
16-287
               

               
Cow position:
               
chr25:35625444-35625169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
26, 148
               

               
Conread position:
               
16-318
               

               
Cow position:
               
chr25:9754348-9754049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
16-435
               

               
Cow position:
               
chr25:11131312-11131754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
26, 148
               

               
Conread position:
               
16-436
               

               
Cow position:
               
chr25:29215659-29215230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 148
               

               
Conread position:
               
18-291
               

               
Cow position:
               
chr25:36033181-36033457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
22-283
               

               
Cow position:
               
chr25:23389544-23389267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 238
               

               
Conread position:
               
22-306
               

               
Cow position:
               
chr25:35332906-35333193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
22-326
               

               
Cow position:
               
chr25:8225840-8226158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
22-326
               

               
Cow position:
               
chr25:12261161-12260834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 175
               

               
Conread position:
               
22-370
               

               
Cow position:
               
chr25:16866965-16867346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
28-313
               

               
Cow position:
               
chr25:12239400-12239105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
14, 129
               

               
Conread position:
               
50-166
               

               
Cow position:
               
chr25:15694758-15694875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
50-188
               

               
Cow position:
               
chr25:21209174-21209029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-218
               

               
Cow position:
               
chr25:10746674-10746844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
50-218
               

               
Cow position:
               
chr25:24008403-24008228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 155
               

               
Conread position:
               
50-220
               

               
Cow position:
               
chr25:17712308-17712486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
50-234
               

               
Cow position:
               
chr25:6256164-6255974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
50-234
               

               
Cow position:
               
chr25:8347283-8347471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
50-242
               

               
Cow position:
               
chr25:6424814-6424617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
50-242
               

               
Cow position:
               
chr25:10365978-10365782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 154
               

               
Conread position:
               
50-254
               

               
Cow position:
               
chr25:1096351-1096552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 126
               

               
Conread position:
               
50-257
               

               
Cow position:
               
chr25:24452395-24452191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
50-276
               

               
Cow position:
               
chr25:7329318-7329553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
50-279
               

               
Cow position:
               
chr25:8918504-8918269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr25:13642542-13642301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 155
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr25:16001746-16001514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 99
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr25:4002570-4002817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
56, 157
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr25:5514780-5515029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
56, 157
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr25:9961404-9961158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
33, 160
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr25:12824240-12824002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 80
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr25:13380842-13380594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
50-290
               

               
Cow position:
               
chr25:7800910-7801159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-291
               

               
Cow position:
               
chr25:5792033-5791781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 187
               

               
Conread position:
               
50-293
               

               
Cow position:
               
chr25:20211312-20211059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 121
               

               
Conread position:
               
50-294
               

               
Cow position:
               
chr25:12817146-12817397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 127
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr25:9023419-9023656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
50-302
               

               
Cow position:
               
chr25:20020213-20019968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
208, 67
               

               
Conread position:
               
50-302
               

               
Cow position:
               
chr25:25827236-25827502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
50-303
               

               
Cow position:
               
chr25:6891745-6891503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
119, 64
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr25:36535661-36535399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
50-310
               

               
Cow position:
               
chr25:18294539-18294275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
95, 151
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr25:6464255-6463982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 79
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr25:20348632-20348916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
61, 156
               

               
Conread position:
               
50-319
               

               
Cow position:
               
chr25:9957258-9956990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 70
               

               
Conread position:
               
50-319
               

               
Cow position:
               
chr25:41354532-41354257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr25:33664122-33663856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr25:35347678-35347952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr25:1838014-1838293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr25:6886203-6885919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 209
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr25:1735542-1735267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
54, 118
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr25:10218277-10217994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
27, 212
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr25:12081534-12081267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr25:16064670-16064947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 72
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr25:18075443-18075719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 8
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr25:20402946-20402654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 159
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr25:26087289-26087574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 182
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr25:30319675-30319399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 158
               

               
Conread position:
               
50-330
               

               
Cow position:
               
chr25:9642128-9642417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
50, 117
               

               
Conread position:
               
50-352
               

               
Cow position:
               
chr25:22297243-22296939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
50-356
               

               
Cow position:
               
chr25:15377107-15377417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 54
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr25:13569393-13569080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr25:20785810-20785491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
50-363
               

               
Cow position:
               
chr25:9349483-9349186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
209, 50
               

               
Conread position:
               
50-364
               

               
Cow position:
               
chr25:788043-788357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr25:7581654-7581326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr25:12840944-12840617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
93, 55
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr25:14196630-14196962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
56, 109
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr25:17658388-17658712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
50-367
               

               
Cow position:
               
chr25:21245833-21245502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 123
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr25:4522045-4521737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
245, 42
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr25:6961376-6961048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr25:11585292-11585623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr25:14791526-14791859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 105
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr25:15254557-15254243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
55, 101
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr25:19129628-19129958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
63, 8
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr25:19679116-19679459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr25:22531061-22531386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr25:30279433-30279103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 99
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr25:36761880-36762210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 151
               

               
Conread position:
               
50-373
               

               
Cow position:
               
chr25:16319358-16319032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr25:20023619-20023277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
54, 111
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr25:25051610-25051268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
55, 87
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr25:26238645-26238971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr25:27531493-27531163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr25:33256142-33256462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
60, 141
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr25:34169728-34170055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
54, 100
               

               
Conread position:
               
50-376
               

               
Cow position:
               
chr25:36037006-36036668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
50-379
               

               
Cow position:
               
chr25:6226815-6227149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 141
               

               
Conread position:
               
50-380
               

               
Cow position:
               
chr25:1762881-1763202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
209, 58
               

               
Conread position:
               
50-380
               

               
Cow position:
               
chr25:38981885-38982208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 14
               

               
Conread position:
               
50-392
               

               
Cow position:
               
chr25:40321519-40321163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-394
               

               
Cow position:
               
chr25:8120550-8120908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
50, 177
               

               
Conread position:
               
50-394
               

               
Cow position:
               
chr25:28188175-28187815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 155
               

               
Conread position:
               
50-400
               

               
Cow position:
               
chr25:24669657-24669315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
50-409
               

               
Cow position:
               
chr25:5847033-5846665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
49, 118
               

               
Conread position:
               
50-425
               

               
Cow position:
               
chr25:33691327-33691714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
56, 109
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr25:14512889-14513299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 99
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr25:16400476-16400116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
139, 48
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr25:36081647-36082061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
50-436
               

               
Cow position:
               
chr25:7216602-7217011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 108
               

               
Conread position:
               
50-436
               

               
Cow position:
               
chr25:11666430-11666820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
96, 141
               

               
Conread position:
               
50-437
               

               
Cow position:
               
chr25:15273463-15273859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr25:7306072-7306486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr25:10643536-10643120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 150
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr25:12778758-12778365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
61, 107
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr25:18293530-18293906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
131, 74
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr25:18721331-18720931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
192, 47
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr25:21191261-21191673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr25:25754223-25753829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 185
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr25:26225266-26224840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr25:26700812-26701216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
50-439
               

               
Cow position:
               
chr25:5407522-5407911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
50-441
               

               
Cow position:
               
chr25:37594188-37594584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
187, 75
               

               
Conread position:
               
50-445
               

               
Cow position:
               
chr25:5341424-5341820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
50-451
               

               
Cow position:
               
chr25:17975593-17975190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
50-459
               

               
Cow position:
               
chr25:9269145-9269542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
209, 58
               

               
Conread position:
               
50-461
               

               
Cow position:
               
chr25:23829343-23828925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
50-469
               

               
Cow position:
               
chr25:18988150-18988578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 201
               

               
Conread position:
               
50-481
               

               
Cow position:
               
chr25:2136125-2136570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 106
               

               
Conread position:
               
50-481
               

               
Cow position:
               
chr25:3992564-3993003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
57, 110
               

               
Conread position:
               
50-482
               

               
Cow position:
               
chr25:22314975-22315420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
50-483
               

               
Cow position:
               
chr25:24572848-24573283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 86
               

               
Conread position:
               
50-487
               

               
Cow position:
               
chr25:12097616-12098054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
50-488
               

               
Cow position:
               
chr25:2414604-2415044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
180, 48
               

               
Conread position:
               
50-511
               

               
Cow position:
               
chr25:22203916-22203444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
58, 159
               

               
Conread position:
               
52-190
               

               
Cow position:
               
chr25:16389515-16389373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
52-379
               

               
Cow position:
               
chr25:18564271-18564600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
139, 62
               

               
Conread position:
               
52-400
               

               
Cow position:
               
chr25:33550281-33550648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 105
               

               
Conread position:
               
53-217
               

               
Cow position:
               
chr25:35607945-35607777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
53-229
               

               
Cow position:
               
chr25:2595954-2596143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
53-256
               

               
Cow position:
               
chr25:36026784-36026991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 203
               

               
Conread position:
               
53-276
               

               
Cow position:
               
chr25:14225019-14224799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
136, 72
               

               
Conread position:
               
53-295
               

               
Cow position:
               
chr25:15319697-15319943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
53-326
               

               
Cow position:
               
chr25:16922017-16921742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
55, 104
               

               
Conread position:
               
53-326
               

               
Cow position:
               
chr25:35612520-35612258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
241, 50
               

               
Conread position:
               
53-335
               

               
Cow position:
               
chr25:21289117-21289410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
51, 214
               

               
Conread position:
               
53-350
               

               
Cow position:
               
chr25:33978424-33978135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
53-362
               

               
Cow position:
               
chr25:20007924-20008230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 48
               

               
Conread position:
               
53-363
               

               
Cow position:
               
chr25:61434-61748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
51, 151
               

               
Conread position:
               
53-366
               

               
Cow position:
               
chr25:10504558-10504240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
58, 95
               

               
Conread position:
               
53-374
               

               
Cow position:
               
chr25:21895109-21894776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 114
               

               
Conread position:
               
53-438
               

               
Cow position:
               
chr25:2110860-2111232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 44
               

               
Conread position:
               
53-482
               

               
Cow position:
               
chr25:26654683-26655132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 159
               

               
Conread position:
               
53-537
               

               
Cow position:
               
chr25:21950903-21951394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 146
               

               
Conread position:
               
54-189
               

               
Cow position:
               
chr25:16316675-16316810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
54-191
               

               
Cow position:
               
chr25:18935096-18934954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
50, 101
               

               
Conread position:
               
54-237
               

               
Cow position:
               
chr25:33839166-33839344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 54
               

               
Conread position:
               
54-277
               

               
Cow position:
               
chr25:10137876-10138099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
54-294
               

               
Cow position:
               
chr25:17354160-17354389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
141, 54
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr25:6474321-6473986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
54-370
               

               
Cow position:
               
chr25:6683283-6682957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 84
               

               
Conread position:
               
54-402
               

               
Cow position:
               
chr25:21193166-21192802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
54-464
               

               
Cow position:
               
chr25:30852551-30852971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
54-512
               

               
Cow position:
               
chr25:20069498-20069967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
51, 101
               

               
Conread position:
               
55-287
               

               
Cow position:
               
chr25:6470441-6470199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
55-305
               

               
Cow position:
               
chr25:14266725-14266484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
49, 99
               

               
Conread position:
               
55-320
               

               
Cow position:
               
chr25:17914559-17914829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 150
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr25:24405957-24405556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 98
               

               
Conread position:
               
55-440
               

               
Cow position:
               
chr25:8576472-8576872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
55-441
               

               
Cow position:
               
chr25:14833877-14833469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
65, 96
               

               
Conread position:
               
55-444
               

               
Cow position:
               
chr25:35344817-35345177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
56-225
               

               
Cow position:
               
chr25:25948615-25948445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
56-239
               

               
Cow position:
               
chr25:20085067-20085251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
66, 164
               

               
Conread position:
               
56-284
               

               
Cow position:
               
chr25:26058365-26058597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
33, 148
               

               
Conread position:
               
56-287
               

               
Cow position:
               
chr25:13708797-13709027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 41
               

               
Conread position:
               
58-301
               

               
Cow position:
               
chr25:9396232-9396474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
46, 124
               

               
Conread position:
               
58-326
               

               
Cow position:
               
chr25:23053338-23053612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
58-374
               

               
Cow position:
               
chr25:15714663-15714982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 101
               

               
Conread position:
               
58-435
               

               
Cow position:
               
chr25:40957205-40956813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 94
               

               
Conread position:
               
58-436
               

               
Cow position:
               
chr25:20060250-20059853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 278
               

               
Conread position:
               
59-326
               

               
Cow position:
               
chr25:17566370-17566642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
52, 147
               

               
Conread position:
               
59-350
               

               
Cow position:
               
chr25:38135531-38135835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 93
               

               
Conread position:
               
59-362
               

               
Cow position:
               
chr25:7007699-7008009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
59-435
               

               
Cow position:
               
chr25:23410446-23410833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 94
               

               
Conread position:
               
59-442
               

               
Cow position:
               
chr25:30462507-30462121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
59-487
               

               
Cow position:
               
chr25:11437019-11436579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
63-370
               

               
Cow position:
               
chr25:12319551-12319248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
128, 67
               

               
Conread position:
               
64-285
               

               
Cow position:
               
chr25:12204258-12204489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
56, 138
               

               
Conread position:
               
64-286
               

               
Cow position:
               
chr25:35340120-35340344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
64-294
               

               
Cow position:
               
chr25:31732948-31732712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
64-349
               

               
Cow position:
               
chr25:38425153-38425441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
64-370
               

               
Cow position:
               
chr25:19478476-19478780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
40, 93
               

               
Conread position:
               
64-400
               

               
Cow position:
               
chr25:36746658-36746311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 93
               

               
Conread position:
               
65-374
               

               
Cow position:
               
chr25:32191458-32191763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
43, 92
               

               
Conread position:
               
65-435
               

               
Cow position:
               
chr25:20076286-20076672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
65-438
               

               
Cow position:
               
chr25:34768931-34768552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 60
               

               
Conread position:
               
66-295
               

               
Cow position:
               
chr25:36779282-36779524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
39, 141
               

               
Conread position:
               
66-408
               

               
Cow position:
               
chr25:31230436-31230105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
67-287
               

               
Cow position:
               
chr25:13736520-13736298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 127
               

               
Conread position:
               
68-295
               

               
Cow position:
               
chr25:26270142-26269914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
40, 125
               

               
Conread position:
               
68-438
               

               
Cow position:
               
chr25:4681025-4681401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
69-323
               

               
Cow position:
               
chr25:40905036-40904778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 130
               

               
Conread position:
               
70-326
               

               
Cow position:
               
chr25:16714480-16714214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
70-370
               

               
Cow position:
               
chr25:13272363-13272674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
70-467
               

               
Cow position:
               
chr25:22178715-22179133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
71-356
               

               
Cow position:
               
chr25:8157715-8157417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
72-326
               

               
Cow position:
               
chr25:20133520-20133259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
5, 74
               

               
Conread position:
               
72-438
               

               
Cow position:
               
chr25:13294702-13295059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
72-443
               

               
Cow position:
               
chr25:17704545-17704939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 133
               

               
Conread position:
               
73-366
               

               
Cow position:
               
chr25:21266807-21267088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
74-281
               

               
Cow position:
               
chr25:14945644-14945441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
116, 40
               

               
Conread position:
               
74-326
               

               
Cow position:
               
chr25:3145638-3145899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 179
               

               
Conread position:
               
74-427
               

               
Cow position:
               
chr25:11662022-11661645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
75-326
               

               
Cow position:
               
chr25:27801089-27801333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
79-459
               

               
Cow position:
               
chr25:22241794-22242161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
80-294
               

               
Cow position:
               
chr25:21042191-21042408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
114, 69
               

               
Conread position:
               
80-326
               

               
Cow position:
               
chr25:25861556-25861295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
80-326
               

               
Cow position:
               
chr25:26133842-26134098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 125
               

               
Conread position:
               
83-234
               

               
Cow position:
               
chr25:35110323-35110163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
20, 123
               

               
Conread position:
               
83-279
               

               
Cow position:
               
chr25:3982851-3983047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
83-295
               

               
Cow position:
               
chr25:12755684-12755464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
83-312
               

               
Cow position:
               
chr25:13672195-13672436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
25, 131
               

               
Conread position:
               
85-326
               

               
Cow position:
               
chr25:17144241-17144483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
87-362
               

               
Cow position:
               
chr25:11315722-11315999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
90-370
               

               
Cow position:
               
chr25:13443586-13443305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
91-333
               

               
Cow position:
               
chr25:15440961-15440726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 157
               

               
Conread position:
               
92-289
               

               
Cow position:
               
chr25:6121948-6121752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 154
               

               
Conread position:
               
95-374
               

               
Cow position:
               
chr25:23779495-23779220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
98-362
               

               
Cow position:
               
chr25:22751187-22750910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
98-366
               

               
Cow position:
               
chr25:21893163-21893439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
99-286
               

               
Cow position:
               
chr25:6943291-6943096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 108
               

               
Conread position:
               
103-405
               

               
Cow position:
               
chr25:11318841-11319135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
66, 122
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr25:23323038-23323215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
104-294
               

               
Cow position:
               
chr25:31704825-31705025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
104-326
               

               
Cow position:
               
chr25:17342285-17342513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
47, 97
               

               
Conread position:
               
104-348
               

               
Cow position:
               
chr25:27532841-27532590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
104-366
               

               
Cow position:
               
chr25:18905717-18905986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
90, 135
               

               
Conread position:
               
106-370
               

               
Cow position:
               
chr25:23245175-23244897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
65, 46
               

               
Conread position:
               
106-380
               

               
Cow position:
               
chr25:26679062-26679341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
107-295
               

               
Cow position:
               
chr25:18894884-18894696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
107-312
               

               
Cow position:
               
chr25:24651617-24651412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
107-326
               

               
Cow position:
               
chr25:5920773-5920999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
108-326
               

               
Cow position:
               
chr25:17991747-17991532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
109-366
               

               
Cow position:
               
chr25:6996619-6996880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
112-288
               

               
Cow position:
               
chr25:36138800-36138633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 41
               

               
Conread position:
               
112-320
               

               
Cow position:
               
chr25:8485655-8485442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 89
               

               
Conread position:
               
112-366
               

               
Cow position:
               
chr25:9002515-9002771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 112
               

               
Conread position:
               
113-370
               

               
Cow position:
               
chr25:7380999-7380734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
114-438
               

               
Cow position:
               
chr25:31732492-31732137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
115-287
               

               
Cow position:
               
chr25:32588036-32587863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 86
               

               
Conread position:
               
118-377
               

               
Cow position:
               
chr25:8961620-8961882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
118-444
               

               
Cow position:
               
chr25:36501392-36501057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
63, 131
               

               
Conread position:
               
120-394
               

               
Cow position:
               
chr25:30618914-30619193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
122-307
               

               
Cow position:
               
chr25:22332612-22332798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 124
               

               
Conread position:
               
122-346
               

               
Cow position:
               
chr25:19317109-19317346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
124-374
               

               
Cow position:
               
chr25:21668098-21668358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
129-313
               

               
Cow position:
               
chr25:12997449-12997635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
140-370
               

               
Cow position:
               
chr25:9843044-9843281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
140-374
               

               
Cow position:
               
chr25:14157490-14157734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
148-487
               

               
Cow position:
               
chr25:36555814-36555452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
150-295
               

               
Cow position:
               
chr25:13640261-13640404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
150-349
               

               
Cow position:
               
chr25:3373495-3373298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
150-370
               

               
Cow position:
               
chr25:33457607-33457837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
150-371
               

               
Cow position:
               
chr25:4245567-4245776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
146, 45
               

               
Conread position:
               
152-310
               

               
Cow position:
               
chr25:24504618-24504461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
107, 45
               

               
Conread position:
               
152-378
               

               
Cow position:
               
chr25:19364182-19363946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
152-380
               

               
Cow position:
               
chr25:30816765-30817004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
152-505
               

               
Cow position:
               
chr25:18202046-18201682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
153-366
               

               
Cow position:
               
chr25:22730715-22730929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
106, 34
               

               
Conread position:
               
153-438
               

               
Cow position:
               
chr25:12932514-12932803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
161-374
               

               
Cow position:
               
chr25:1824207-1823988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
162-323
               

               
Cow position:
               
chr25:12252923-12252757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
165-438
               

               
Cow position:
               
chr25:24066765-24066492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
95, 34
               

               
Conread position:
               
165-506
               

               
Cow position:
               
chr25:17474619-17474273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
179-366
               

               
Cow position:
               
chr25:36120411-36120599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
183-367
               

               
Cow position:
               
chr25:26051813-26052005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
184-370
               

               
Cow position:
               
chr25:5919997-5920185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
190-362
               

               
Cow position:
               
chr25:12806963-12807135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
104, 9
               

               
Conread position:
               
197-435
               

               
Cow position:
               
chr25:17702067-17701818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
224-366
               

               
Cow position:
               
chr25:447316-447163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
235-472
               

               
Cow position:
               
chr25:3638038-3637804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
247-435
               

               
Cow position:
               
chr25:10364360-10364161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
13, 135
               

               
Conread position:
               
259-444
               

               
Cow position:
               
chr25:11823443-11823242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
265-444
               

               
Cow position:
               
chr25:23998931-23998737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
266-438
               

               
Cow position:
               
chr25:15024906-15025085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
272-430
               

               
Cow position:
               
chr25:36341019-36340853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               
Show alignments to all cow chromosomes.