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Cow genome map

           
Conread name:
           
Ss1.1-rfce22c_a4.5
        

               
Conread position:
               
2-326
               

               
Cow position:
               
chr4:51003088-51003416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
4-326
               

               
Cow position:
               
chr4:47351521-47351853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr4:29813818-29813554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
5-326
               

               
Cow position:
               
chr4:3388263-3388594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
38, 241
               

               
Conread position:
               
5-326
               

               
Cow position:
               
chr4:15623555-15623900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
37, 160
               

               
Conread position:
               
5-326
               

               
Cow position:
               
chr4:19007753-19008096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 190
               

               
Conread position:
               
5-370
               

               
Cow position:
               
chr4:3421361-3421722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
5-510
               

               
Cow position:
               
chr4:21064748-21065287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 158
               

               
Conread position:
               
6-366
               

               
Cow position:
               
chr4:45589874-45589505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
14-466
               

               
Cow position:
               
chr4:10412099-10412563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
28, 151
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr4:1034790-1035072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
16-367
               

               
Cow position:
               
chr4:5461131-5460764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 180
               

               
Conread position:
               
16-438
               

               
Cow position:
               
chr4:19744611-19745060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
16-438
               

               
Cow position:
               
chr4:21371122-21371552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 194
               

               
Conread position:
               
16-532
               

               
Cow position:
               
chr4:54190820-54191346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 114
               

               
Conread position:
               
18-393
               

               
Cow position:
               
chr4:8704718-8705117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 141
               

               
Conread position:
               
22-302
               

               
Cow position:
               
chr4:14919739-14920019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
22-351
               

               
Cow position:
               
chr4:14470840-14470494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
22-366
               

               
Cow position:
               
chr4:20654-21008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
22-369
               

               
Cow position:
               
chr4:34337534-34337173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 139
               

               
Conread position:
               
22-370
               

               
Cow position:
               
chr4:51727811-51728179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
22-445
               

               
Cow position:
               
chr4:23311532-23311091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
21, 148
               

               
Conread position:
               
23-430
               

               
Cow position:
               
chr4:5610341-5609909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 139
               

               
Conread position:
               
24-275
               

               
Cow position:
               
chr4:10016859-10016605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
24-287
               

               
Cow position:
               
chr4:56233421-56233692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 138
               

               
Conread position:
               
24-492
               

               
Cow position:
               
chr4:21392074-21391591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 133
               

               
Conread position:
               
26-438
               

               
Cow position:
               
chr4:19558459-19558857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
27-451
               

               
Cow position:
               
chr4:22860958-22860524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
29-475
               

               
Cow position:
               
chr4:21365149-21365611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
13, 178
               

               
Conread position:
               
37-370
               

               
Cow position:
               
chr4:48485753-48486094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
5, 123
               

               
Conread position:
               
41-277
               

               
Cow position:
               
chr4:54804668-54804426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
42-217
               

               
Cow position:
               
chr4:44902205-44902376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
44-460
               

               
Cow position:
               
chr4:23509350-23509789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 164
               

               
Conread position:
               
48-302
               

               
Cow position:
               
chr4:34310689-34310428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
6, 188
               

               
Conread position:
               
49-293
               

               
Cow position:
               
chr4:37553278-37553025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 114
               

               
Conread position:
               
49-302
               

               
Cow position:
               
chr4:23526465-23526720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
49-438
               

               
Cow position:
               
chr4:19238007-19238408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
59, 83
               

               
Conread position:
               
50-173
               

               
Cow position:
               
chr4:55508647-55508519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
50-176
               

               
Cow position:
               
chr4:40576148-40576021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
50-190
               

               
Cow position:
               
chr4:2536601-2536743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
50-190
               

               
Cow position:
               
chr4:3990856-3990711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
50-190
               

               
Cow position:
               
chr4:7249800-7249657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
50-190
               

               
Cow position:
               
chr4:10471992-10472135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
50-190
               

               
Cow position:
               
chr4:56409950-56410100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
50-190
               

               
Cow position:
               
chr4:56514170-56514024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 107
               

               
Conread position:
               
50-196
               

               
Cow position:
               
chr4:15462504-15462356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
50-218
               

               
Cow position:
               
chr4:26163201-26163032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
50-218
               

               
Cow position:
               
chr4:41292211-41292041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
50-218
               

               
Cow position:
               
chr4:54468526-54468351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 137
               

               
Conread position:
               
50-221
               

               
Cow position:
               
chr4:23911820-23911639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
50-221
               

               
Cow position:
               
chr4:55270992-55270814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 137
               

               
Conread position:
               
50-227
               

               
Cow position:
               
chr4:42232433-42232608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
50-230
               

               
Cow position:
               
chr4:12260012-12259828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 154
               

               
Conread position:
               
50-231
               

               
Cow position:
               
chr4:40410351-40410173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 82
               

               
Conread position:
               
50-235
               

               
Cow position:
               
chr4:23570566-23570761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 158
               

               
Conread position:
               
50-235
               

               
Cow position:
               
chr4:33421593-33421401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
50-235
               

               
Cow position:
               
chr4:44073001-44072808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-236
               

               
Cow position:
               
chr4:54667922-54667730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
50, 155
               

               
Conread position:
               
50-236
               

               
Cow position:
               
chr4:57931679-57931872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr4:49813898-49813709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
54, 129
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr4:67392738-67392920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
147, 51
               

               
Conread position:
               
50-239
               

               
Cow position:
               
chr4:46526767-46526959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
50-240
               

               
Cow position:
               
chr4:57555735-57555934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
49, 157
               

               
Conread position:
               
50-241
               

               
Cow position:
               
chr4:43762810-43763017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
50-241
               

               
Cow position:
               
chr4:67599963-67599775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
50-242
               

               
Cow position:
               
chr4:46370579-46370780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
50-243
               

               
Cow position:
               
chr4:11090918-11090733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
50-267
               

               
Cow position:
               
chr4:30574225-30574439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
138, 54
               

               
Conread position:
               
50-268
               

               
Cow position:
               
chr4:43909521-43909736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
50-271
               

               
Cow position:
               
chr4:27540390-27540610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 100
               

               
Conread position:
               
50-273
               

               
Cow position:
               
chr4:16736272-16736497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
54, 155
               

               
Conread position:
               
50-276
               

               
Cow position:
               
chr4:41908023-41907802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 103
               

               
Conread position:
               
50-279
               

               
Cow position:
               
chr4:1915809-1915576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 103
               

               
Conread position:
               
50-280
               

               
Cow position:
               
chr4:3475400-3475633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
50-280
               

               
Cow position:
               
chr4:16091631-16091399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
54, 181
               

               
Conread position:
               
50-280
               

               
Cow position:
               
chr4:53832814-53833049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
50-281
               

               
Cow position:
               
chr4:18577007-18576766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
50-284
               

               
Cow position:
               
chr4:43370081-43369839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
50-284
               

               
Cow position:
               
chr4:46274962-46275185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
50-285
               

               
Cow position:
               
chr4:52497806-52497589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
208, 55
               

               
Conread position:
               
50-286
               

               
Cow position:
               
chr4:54975077-54975305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
135, 58
               

               
Conread position:
               
50-286
               

               
Cow position:
               
chr4:65891760-65892001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 188
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr4:16637830-16637594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr4:19561463-19561690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
142, 40
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr4:23060234-23059986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 159
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr4:48137678-48137922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
61, 154
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr4:53999738-53999500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr4:61215229-61214985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 152
               

               
Conread position:
               
50-288
               

               
Cow position:
               
chr4:63813533-63813299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
86, 102
               

               
Conread position:
               
50-290
               

               
Cow position:
               
chr4:19438227-19438478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 105
               

               
Conread position:
               
50-290
               

               
Cow position:
               
chr4:52632201-52631951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
50-291
               

               
Cow position:
               
chr4:480238-479994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
72, 103
               

               
Conread position:
               
50-291
               

               
Cow position:
               
chr4:11901794-11901547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
56, 156
               

               
Conread position:
               
50-292
               

               
Cow position:
               
chr4:22849941-22849701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
189, 55
               

               
Conread position:
               
50-292
               

               
Cow position:
               
chr4:30690493-30690730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
209, 142
               

               
Conread position:
               
50-292
               

               
Cow position:
               
chr4:52167077-52166836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
50-292
               

               
Cow position:
               
chr4:65538639-65538402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
50-293
               

               
Cow position:
               
chr4:20299039-20299291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-293
               

               
Cow position:
               
chr4:46501123-46501360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
96, 74
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr4:5984276-5984028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 156
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr4:22051700-22051453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr4:26746253-26746501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
50, 79
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr4:47289839-47290096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
58, 208
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr4:61972706-61972445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
61, 170
               

               
Conread position:
               
50-302
               

               
Cow position:
               
chr4:14414577-14414317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 154
               

               
Conread position:
               
50-302
               

               
Cow position:
               
chr4:46060715-46060968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
62, 45
               

               
Conread position:
               
50-303
               

               
Cow position:
               
chr4:5999425-5999163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
50-303
               

               
Cow position:
               
chr4:24119140-24118880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
50, 154
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr4:19497481-19497234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr4:20502423-20502667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr4:68362711-68362953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
195, 58
               

               
Conread position:
               
50-310
               

               
Cow position:
               
chr4:19463259-19463530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 108
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr4:12034032-12034302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 188
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr4:26549232-26549518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
50-316
               

               
Cow position:
               
chr4:37620119-37619848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 153
               

               
Conread position:
               
50-317
               

               
Cow position:
               
chr4:17052829-17052552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
50-317
               

               
Cow position:
               
chr4:35940243-35939966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 158
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr4:23445283-23445004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr4:42672940-42673218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
50-319
               

               
Cow position:
               
chr4:42480956-42481226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
50-319
               

               
Cow position:
               
chr4:43866082-43865814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
50-319
               

               
Cow position:
               
chr4:60371061-60370783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
57, 154
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr4:9137043-9137323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 94
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr4:10916073-10915792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr4:11187228-11187495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr4:17474204-17474483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 202
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr4:28173031-28172763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr4:51866764-51867036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 87
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr4:15904867-15905147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
56, 106
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr4:43148172-43148458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
58, 147
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr4:41441334-41441611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:5797741-5798016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:7571178-7571463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:13327189-13326905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
58, 157
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:18255632-18255902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
148, 80
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:19265341-19265623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 132
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:25806668-25806949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 131
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:28836295-28836586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
56, 159
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:33612594-33612309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:33623487-33623763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 149
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:34171800-34171532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:34209795-34210083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:34383568-34383292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:39231754-39231471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 125
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:46550153-46550430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:47730631-47730908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 87
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:51739934-51739667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 70
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr4:51903371-51903655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
61, 214
               

               
Conread position:
               
50-327
               

               
Cow position:
               
chr4:12003992-12004265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
60, 191
               

               
Conread position:
               
50-331
               

               
Cow position:
               
chr4:24688580-24688292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
49, 147
               

               
Conread position:
               
50-345
               

               
Cow position:
               
chr4:23853973-23854255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
52, 81
               

               
Conread position:
               
50-349
               

               
Cow position:
               
chr4:21233102-21232795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
50-349
               

               
Cow position:
               
chr4:54930647-54930346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
50-350
               

               
Cow position:
               
chr4:31023210-31023524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
50, 115
               

               
Conread position:
               
50-350
               

               
Cow position:
               
chr4:65431914-65432230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
48, 153
               

               
Conread position:
               
50-355
               

               
Cow position:
               
chr4:16799424-16799101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
58, 108
               

               
Conread position:
               
50-357
               

               
Cow position:
               
chr4:44612771-44613092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 189
               

               
Conread position:
               
50-358
               

               
Cow position:
               
chr4:20139751-20139429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
54, 79
               

               
Conread position:
               
50-360
               

               
Cow position:
               
chr4:16602283-16601973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
50-360
               

               
Cow position:
               
chr4:33433490-33433166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
147, 52
               

               
Conread position:
               
50-360
               

               
Cow position:
               
chr4:59008601-59008265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
56, 227
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr4:12676581-12676891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr4:19582846-19582526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr4:25879165-25879482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr4:26400725-26401047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 193
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr4:29805594-29805282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr4:30974105-30974425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr4:32260078-32259751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 132
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr4:32725991-32726316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr4:33395921-33395606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 99
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr4:36893122-36893451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr4:45738715-45738383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
32, 109
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr4:65919386-65919700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
141, 96
               

               
Conread position:
               
50-363
               

               
Cow position:
               
chr4:38999195-38999516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
50-365
               

               
Cow position:
               
chr4:31004636-31004314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 150
               

               
Conread position:
               
50-365
               

               
Cow position:
               
chr4:66547984-66547673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:509129-508813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 60
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:1495631-1495313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:12591442-12591118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 171
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:20157643-20157321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:23847282-23846956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:37502590-37502908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 192
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:39128299-39128633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 159
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:39455823-39456130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:41186138-41185824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:44782143-44782470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:45367502-45367835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 155
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:46591428-46591763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:49629266-49629577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
209, 49
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:65650356-65650038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 153
               

               
Conread position:
               
50-367
               

               
Cow position:
               
chr4:58881198-58880864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-368
               

               
Cow position:
               
chr4:22744090-22744397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
50-368
               

               
Cow position:
               
chr4:45662731-45662415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 49
               

               
Conread position:
               
50-368
               

               
Cow position:
               
chr4:63349702-63349393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr4:17112108-17111775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr4:11193951-11194285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr4:19699869-19700195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 109
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr4:27529882-27530218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr4:41867213-41867535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr4:46477170-46476846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 109
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr4:49089563-49089886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
50-371
               

               
Cow position:
               
chr4:3687697-3688029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
50-373
               

               
Cow position:
               
chr4:38952327-38952656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 77
               

               
Conread position:
               
50-373
               

               
Cow position:
               
chr4:47348601-47348929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 21
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr4:3850321-3850655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr4:12127874-12127535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 159
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr4:21531872-21531540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
61, 29
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr4:22010290-22009954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 102
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr4:26469417-26469756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
51, 79
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr4:45583359-45583019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 191
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr4:66256456-66256790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 69
               

               
Conread position:
               
50-377
               

               
Cow position:
               
chr4:54455575-54455237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 100
               

               
Conread position:
               
50-379
               

               
Cow position:
               
chr4:19322310-19321969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
50-380
               

               
Cow position:
               
chr4:10968616-10968279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
50-394
               

               
Cow position:
               
chr4:19584473-19584828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
58, 163
               

               
Conread position:
               
50-394
               

               
Cow position:
               
chr4:44839116-44838772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
50-395
               

               
Cow position:
               
chr4:11897530-11897182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 96
               

               
Conread position:
               
50-400
               

               
Cow position:
               
chr4:10731987-10732351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 203
               

               
Conread position:
               
50-400
               

               
Cow position:
               
chr4:13668848-13668487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
50-400
               

               
Cow position:
               
chr4:37915561-37915207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 21
               

               
Conread position:
               
50-400
               

               
Cow position:
               
chr4:62921088-62920745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
192, 56
               

               
Conread position:
               
50-403
               

               
Cow position:
               
chr4:26659074-26659434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
50-405
               

               
Cow position:
               
chr4:55395537-55395897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 56
               

               
Conread position:
               
50-406
               

               
Cow position:
               
chr4:23451327-23450959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
50-414
               

               
Cow position:
               
chr4:34630670-34631043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 81
               

               
Conread position:
               
50-421
               

               
Cow position:
               
chr4:11021881-11021506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr4:16239368-16238982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
132, 75
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr4:19597546-19597145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr4:25369885-25370281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
63, 53
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr4:45235091-45234703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 107
               

               
Conread position:
               
50-436
               

               
Cow position:
               
chr4:46597151-46597542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
50-437
               

               
Cow position:
               
chr4:23647074-23646678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 128
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr4:657049-656618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr4:961894-961475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr4:2141514-2141899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr4:2610005-2610392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr4:12560805-12561209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 58
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr4:14505231-14504858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
192, 61
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr4:17379049-17378674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
218, 80
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr4:27997454-27997866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 40
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr4:29291291-29291696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr4:31348425-31348010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 127
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr4:33971127-33970715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr4:46456279-46455905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
144, 8
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr4:49794448-49794840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 53
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr4:61897770-61897362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
50-441
               

               
Cow position:
               
chr4:12049012-12049417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
50-443
               

               
Cow position:
               
chr4:60897504-60897099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
50-445
               

               
Cow position:
               
chr4:54937655-54938077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
50-463
               

               
Cow position:
               
chr4:37935512-37935086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
50-465
               

               
Cow position:
               
chr4:3837048-3837469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
50-466
               

               
Cow position:
               
chr4:51850965-51851418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
50-466
               

               
Cow position:
               
chr4:62471837-62472281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-467
               

               
Cow position:
               
chr4:66173029-66172592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
50-470
               

               
Cow position:
               
chr4:13693909-13693476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-471
               

               
Cow position:
               
chr4:7430087-7430516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
52, 108
               

               
Conread position:
               
50-471
               

               
Cow position:
               
chr4:35981758-35982205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-476
               

               
Cow position:
               
chr4:22138467-22138012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
58, 356
               

               
Conread position:
               
50-478
               

               
Cow position:
               
chr4:42424033-42423592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
50-479
               

               
Cow position:
               
chr4:13142763-13142352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
50-480
               

               
Cow position:
               
chr4:27292190-27291777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
50-480
               

               
Cow position:
               
chr4:52748689-52748252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
50-482
               

               
Cow position:
               
chr4:27276772-27276327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 74
               

               
Conread position:
               
50-485
               

               
Cow position:
               
chr4:59785086-59785542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 350
               

               
Conread position:
               
50-488
               

               
Cow position:
               
chr4:8801276-8801728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 82
               

               
Conread position:
               
50-494
               

               
Cow position:
               
chr4:9795602-9795156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
67, 145
               

               
Conread position:
               
50-505
               

               
Cow position:
               
chr4:28772298-28771833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
61, 92
               

               
Conread position:
               
50-506
               

               
Cow position:
               
chr4:41301222-41300756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 153
               

               
Conread position:
               
50-531
               

               
Cow position:
               
chr4:4321237-4320725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 158
               

               
Conread position:
               
50-533
               

               
Cow position:
               
chr4:18974201-18974687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
46, 145
               

               
Conread position:
               
51-302
               

               
Cow position:
               
chr4:67444913-67445171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 155
               

               
Conread position:
               
51-320
               

               
Cow position:
               
chr4:11331857-11332141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
8, 109
               

               
Conread position:
               
51-393
               

               
Cow position:
               
chr4:22842118-22842468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
62, 103
               

               
Conread position:
               
52-239
               

               
Cow position:
               
chr4:11004948-11004759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
94, 149
               

               
Conread position:
               
52-259
               

               
Cow position:
               
chr4:49992858-49993054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
53-240
               

               
Cow position:
               
chr4:53447894-53447703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
53-269
               

               
Cow position:
               
chr4:1237344-1237122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
53-277
               

               
Cow position:
               
chr4:11099897-11099667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
53-302
               

               
Cow position:
               
chr4:44025046-44024794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
52, 127
               

               
Conread position:
               
53-304
               

               
Cow position:
               
chr4:123429-123181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
53-306
               

               
Cow position:
               
chr4:21058614-21058346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 129
               

               
Conread position:
               
53-308
               

               
Cow position:
               
chr4:11201589-11201852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
53-312
               

               
Cow position:
               
chr4:22236702-22236448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
138, 55
               

               
Conread position:
               
53-320
               

               
Cow position:
               
chr4:13043042-13043307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
53-320
               

               
Cow position:
               
chr4:14743031-14743295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 147
               

               
Conread position:
               
53-320
               

               
Cow position:
               
chr4:27664777-27665057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 156
               

               
Conread position:
               
53-323
               

               
Cow position:
               
chr4:4672563-4672289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 152
               

               
Conread position:
               
53-324
               

               
Cow position:
               
chr4:14938306-14938578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
53-326
               

               
Cow position:
               
chr4:203374-203093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
53-326
               

               
Cow position:
               
chr4:2893796-2894081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
53-326
               

               
Cow position:
               
chr4:18095907-18095624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
55, 158
               

               
Conread position:
               
53-333
               

               
Cow position:
               
chr4:61999682-61999390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 163
               

               
Conread position:
               
53-350
               

               
Cow position:
               
chr4:13222404-13222107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
53-360
               

               
Cow position:
               
chr4:21257357-21257034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
53-367
               

               
Cow position:
               
chr4:8769881-8770195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
53-370
               

               
Cow position:
               
chr4:49159011-49158695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 99
               

               
Conread position:
               
53-371
               

               
Cow position:
               
chr4:19316228-19315906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
53-372
               

               
Cow position:
               
chr4:22345243-22344919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
53-374
               

               
Cow position:
               
chr4:43895033-43894714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
138, 64
               

               
Conread position:
               
53-374
               

               
Cow position:
               
chr4:56240073-56239756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
118, 72
               

               
Conread position:
               
53-374
               

               
Cow position:
               
chr4:65815920-65815604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
205, 50
               

               
Conread position:
               
53-433
               

               
Cow position:
               
chr4:53208073-53208468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
137, 45
               

               
Conread position:
               
53-438
               

               
Cow position:
               
chr4:4084674-4084266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 79
               

               
Conread position:
               
53-438
               

               
Cow position:
               
chr4:20327943-20327533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
53-438
               

               
Cow position:
               
chr4:25356534-25356140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
53-474
               

               
Cow position:
               
chr4:3340723-3341157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
53-489
               

               
Cow position:
               
chr4:13255865-13256292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
54-285
               

               
Cow position:
               
chr4:69385880-69386095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
205, 65
               

               
Conread position:
               
54-286
               

               
Cow position:
               
chr4:19542569-19542804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 178
               

               
Conread position:
               
54-287
               

               
Cow position:
               
chr4:27511044-27511275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
54-302
               

               
Cow position:
               
chr4:22073537-22073298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
136, 41
               

               
Conread position:
               
54-305
               

               
Cow position:
               
chr4:24458325-24458074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
54-310
               

               
Cow position:
               
chr4:66112304-66112037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
54-318
               

               
Cow position:
               
chr4:19708714-19708981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
54-319
               

               
Cow position:
               
chr4:26323506-26323783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr4:15635670-15635398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
137, 21
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr4:25197725-25197445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr4:26307727-26307439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr4:51898776-51899056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 103
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr4:62772161-62771870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
54-362
               

               
Cow position:
               
chr4:45644539-45644226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
54-364
               

               
Cow position:
               
chr4:37342890-37343215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr4:10905686-10905374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
58, 88
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr4:27755528-27755208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
49, 199
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr4:51783954-51784275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 96
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr4:63459443-63459127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 101
               

               
Conread position:
               
54-373
               

               
Cow position:
               
chr4:42922073-42921757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
140, 57
               

               
Conread position:
               
54-374
               

               
Cow position:
               
chr4:19097064-19097391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
66, 97
               

               
Conread position:
               
54-374
               

               
Cow position:
               
chr4:53100578-53100906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
54-376
               

               
Cow position:
               
chr4:12903591-12903927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
57, 21
               

               
Conread position:
               
54-394
               

               
Cow position:
               
chr4:2602003-2602355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 150
               

               
Conread position:
               
54-412
               

               
Cow position:
               
chr4:45775569-45775196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 54
               

               
Conread position:
               
54-438
               

               
Cow position:
               
chr4:23599943-23600344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 108
               

               
Conread position:
               
54-483
               

               
Cow position:
               
chr4:58248180-58248618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
70, 92
               

               
Conread position:
               
54-494
               

               
Cow position:
               
chr4:19435033-19435496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
55-287
               

               
Cow position:
               
chr4:65731146-65730910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
53, 158
               

               
Conread position:
               
55-295
               

               
Cow position:
               
chr4:1014841-1015088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 194
               

               
Conread position:
               
55-295
               

               
Cow position:
               
chr4:5629979-5629738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 222
               

               
Conread position:
               
55-302
               

               
Cow position:
               
chr4:38181456-38181707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 95
               

               
Conread position:
               
55-312
               

               
Cow position:
               
chr4:63119457-63119203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
91, 56
               

               
Conread position:
               
55-317
               

               
Cow position:
               
chr4:395724-395972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
204, 42
               

               
Conread position:
               
55-375
               

               
Cow position:
               
chr4:36730964-36731296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
51, 104
               

               
Conread position:
               
55-380
               

               
Cow position:
               
chr4:63965217-63964881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
55-422
               

               
Cow position:
               
chr4:242999-243387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
53, 101
               

               
Conread position:
               
55-428
               

               
Cow position:
               
chr4:41602622-41603003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
55-431
               

               
Cow position:
               
chr4:52225783-52226168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
55-435
               

               
Cow position:
               
chr4:68233752-68234150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 85
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr4:10992429-10992029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 104
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr4:36945418-36945022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr4:54146701-54146304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 159
               

               
Conread position:
               
55-439
               

               
Cow position:
               
chr4:44496158-44496553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
186, 70
               

               
Conread position:
               
57-291
               

               
Cow position:
               
chr4:27687699-27687941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 145
               

               
Conread position:
               
57-368
               

               
Cow position:
               
chr4:13974197-13973872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 104
               

               
Conread position:
               
58-237
               

               
Cow position:
               
chr4:43295915-43295734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
133, 142
               

               
Conread position:
               
58-250
               

               
Cow position:
               
chr4:54501672-54501476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
54, 98
               

               
Conread position:
               
58-277
               

               
Cow position:
               
chr4:37465807-37465596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
58-308
               

               
Cow position:
               
chr4:11671229-11671484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
36, 98
               

               
Conread position:
               
58-326
               

               
Cow position:
               
chr4:44973419-44973684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
58-365
               

               
Cow position:
               
chr4:68387568-68387887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
58-419
               

               
Cow position:
               
chr4:51122834-51123220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 153
               

               
Conread position:
               
58-435
               

               
Cow position:
               
chr4:40823338-40822943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 93
               

               
Conread position:
               
58-438
               

               
Cow position:
               
chr4:22249669-22249278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 108
               

               
Conread position:
               
58-438
               

               
Cow position:
               
chr4:56570581-56570981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 80
               

               
Conread position:
               
58-482
               

               
Cow position:
               
chr4:59871270-59871691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
59-285
               

               
Cow position:
               
chr4:22215878-22215645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
59-302
               

               
Cow position:
               
chr4:31506254-31505998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
59-320
               

               
Cow position:
               
chr4:13589866-13590127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 143
               

               
Conread position:
               
59-320
               

               
Cow position:
               
chr4:16762954-16762682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
45, 123
               

               
Conread position:
               
59-323
               

               
Cow position:
               
chr4:17833128-17832854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 135
               

               
Conread position:
               
59-326
               

               
Cow position:
               
chr4:10999926-10999665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
51, 131
               

               
Conread position:
               
59-326
               

               
Cow position:
               
chr4:38799417-38799151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 139
               

               
Conread position:
               
59-438
               

               
Cow position:
               
chr4:3440184-3440583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
59-438
               

               
Cow position:
               
chr4:35869993-35870375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
60-435
               

               
Cow position:
               
chr4:35471114-35471486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 60
               

               
Conread position:
               
63-370
               

               
Cow position:
               
chr4:38935140-38935458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
48, 88
               

               
Conread position:
               
64-215
               

               
Cow position:
               
chr4:22259637-22259489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
64-221
               

               
Cow position:
               
chr4:42266959-42266808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
127, 51
               

               
Conread position:
               
64-257
               

               
Cow position:
               
chr4:39009748-39009948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
64-284
               

               
Cow position:
               
chr4:63860098-63859880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
134, 68
               

               
Conread position:
               
64-284
               

               
Cow position:
               
chr4:67408321-67408534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
181, 25
               

               
Conread position:
               
64-286
               

               
Cow position:
               
chr4:34924910-34924681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
64-295
               

               
Cow position:
               
chr4:43750029-43749795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 96
               

               
Conread position:
               
64-302
               

               
Cow position:
               
chr4:53545815-53546050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
64-326
               

               
Cow position:
               
chr4:37691525-37691262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
64-366
               

               
Cow position:
               
chr4:48152585-48152279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 96
               

               
Conread position:
               
64-374
               

               
Cow position:
               
chr4:59277697-59277376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
64-468
               

               
Cow position:
               
chr4:34166192-34165769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 136
               

               
Conread position:
               
64-469
               

               
Cow position:
               
chr4:53125920-53126314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 39
               

               
Conread position:
               
64-477
               

               
Cow position:
               
chr4:24372068-24371649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
65-283
               

               
Cow position:
               
chr4:36724826-36725047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 84
               

               
Conread position:
               
65-370
               

               
Cow position:
               
chr4:33097178-33096882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
129, 22
               

               
Conread position:
               
65-438
               

               
Cow position:
               
chr4:53209019-53209392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 158
               

               
Conread position:
               
66-240
               

               
Cow position:
               
chr4:46708743-46708562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
66-319
               

               
Cow position:
               
chr4:29237368-29237126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
66-326
               

               
Cow position:
               
chr4:25359393-25359648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 138
               

               
Conread position:
               
66-362
               

               
Cow position:
               
chr4:6653517-6653814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 84
               

               
Conread position:
               
66-377
               

               
Cow position:
               
chr4:48961694-48961379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
66-438
               

               
Cow position:
               
chr4:19313789-19314177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
67-218
               

               
Cow position:
               
chr4:46668356-46668508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
67-323
               

               
Cow position:
               
chr4:43740307-43740581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 138
               

               
Conread position:
               
67-435
               

               
Cow position:
               
chr4:25972682-25973067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
69-360
               

               
Cow position:
               
chr4:10055999-10056294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
51, 157
               

               
Conread position:
               
69-366
               

               
Cow position:
               
chr4:13941246-13941552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
70-319
               

               
Cow position:
               
chr4:48321817-48322076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
76, 125
               

               
Conread position:
               
70-366
               

               
Cow position:
               
chr4:68764304-68764611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 138
               

               
Conread position:
               
71-270
               

               
Cow position:
               
chr4:61088367-61088554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
154, 32
               

               
Conread position:
               
71-438
               

               
Cow position:
               
chr4:9681091-9681481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 91
               

               
Conread position:
               
73-326
               

               
Cow position:
               
chr4:31859053-31859314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 124
               

               
Conread position:
               
73-435
               

               
Cow position:
               
chr4:28839418-28839797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
74-326
               

               
Cow position:
               
chr4:1354821-1354575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
185, 112
               

               
Conread position:
               
74-350
               

               
Cow position:
               
chr4:13284169-13284459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
74-459
               

               
Cow position:
               
chr4:1026436-1026043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
75-362
               

               
Cow position:
               
chr4:51768906-51769195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
76-350
               

               
Cow position:
               
chr4:30791759-30792048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
32, 143
               

               
Conread position:
               
76-369
               

               
Cow position:
               
chr4:34022787-34022486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
77-326
               

               
Cow position:
               
chr4:28543805-28543564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
79-326
               

               
Cow position:
               
chr4:29106697-29106957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 130
               

               
Conread position:
               
79-362
               

               
Cow position:
               
chr4:13344339-13344630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
80-448
               

               
Cow position:
               
chr4:17774551-17774165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
83-292
               

               
Cow position:
               
chr4:33869465-33869670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 112
               

               
Conread position:
               
83-318
               

               
Cow position:
               
chr4:38705960-38705731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
83-324
               

               
Cow position:
               
chr4:27344869-27344633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
83-370
               

               
Cow position:
               
chr4:19408198-19407898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
83-370
               

               
Cow position:
               
chr4:43515524-43515816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
85-370
               

               
Cow position:
               
chr4:38944461-38944158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
87-326
               

               
Cow position:
               
chr4:2885734-2885490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
87-482
               

               
Cow position:
               
chr4:45918843-45919249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 67
               

               
Conread position:
               
88-349
               

               
Cow position:
               
chr4:45711180-45711441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
89-490
               

               
Cow position:
               
chr4:45685280-45685672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
92-320
               

               
Cow position:
               
chr4:32459046-32458816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
92-381
               

               
Cow position:
               
chr4:17186537-17186240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
94-301
               

               
Cow position:
               
chr4:17660376-17660162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
98-243
               

               
Cow position:
               
chr4:3462223-3462082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
98-438
               

               
Cow position:
               
chr4:22741591-22741270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
149, 53
               

               
Conread position:
               
100-438
               

               
Cow position:
               
chr4:41371117-41370751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
91, 49
               

               
Conread position:
               
103-295
               

               
Cow position:
               
chr4:54851294-54851100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
103-326
               

               
Cow position:
               
chr4:45077247-45077027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
103-366
               

               
Cow position:
               
chr4:20147011-20147279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
104-260
               

               
Cow position:
               
chr4:38887310-38887148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
87, 127
               

               
Conread position:
               
104-295
               

               
Cow position:
               
chr4:26011681-26011868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
104-303
               

               
Cow position:
               
chr4:61148420-61148634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
104-380
               

               
Cow position:
               
chr4:22713664-22713384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 95
               

               
Conread position:
               
104-437
               

               
Cow position:
               
chr4:16881536-16881184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
105-326
               

               
Cow position:
               
chr4:27632281-27632493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
106-292
               

               
Cow position:
               
chr4:30929424-30929617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 97
               

               
Conread position:
               
107-326
               

               
Cow position:
               
chr4:9570879-9571105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 93
               

               
Conread position:
               
108-467
               

               
Cow position:
               
chr4:34369622-34369246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
109-326
               

               
Cow position:
               
chr4:4843415-4843194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 121
               

               
Conread position:
               
109-326
               

               
Cow position:
               
chr4:48143661-48143888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
110-287
               

               
Cow position:
               
chr4:5047504-5047330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
110-362
               

               
Cow position:
               
chr4:59377746-59378001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
112-326
               

               
Cow position:
               
chr4:9925800-9925579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 114
               

               
Conread position:
               
112-362
               

               
Cow position:
               
chr4:19501249-19501000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
114-302
               

               
Cow position:
               
chr4:15439416-15439602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
114-366
               

               
Cow position:
               
chr4:61313366-61313117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
117-435
               

               
Cow position:
               
chr4:52087773-52088095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
118-438
               

               
Cow position:
               
chr4:54767548-54767200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
120-438
               

               
Cow position:
               
chr4:5913505-5913174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
124-460
               

               
Cow position:
               
chr4:44449659-44449315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
127-441
               

               
Cow position:
               
chr4:33091229-33091544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
128-391
               

               
Cow position:
               
chr4:54524479-54524224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
119, 23
               

               
Conread position:
               
128-444
               

               
Cow position:
               
chr4:48409415-48409089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
130-302
               

               
Cow position:
               
chr4:4826978-4827151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
131-370
               

               
Cow position:
               
chr4:37313024-37313265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
132-366
               

               
Cow position:
               
chr4:36577775-36577531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
132-370
               

               
Cow position:
               
chr4:54927585-54927340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
141-366
               

               
Cow position:
               
chr4:65265448-65265210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
145-326
               

               
Cow position:
               
chr4:18107291-18107110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
53, 101
               

               
Conread position:
               
149-362
               

               
Cow position:
               
chr4:65950526-65950746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
150-366
               

               
Cow position:
               
chr4:24481792-24481577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
150-444
               

               
Cow position:
               
chr4:20184585-20184879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
104, 40
               

               
Conread position:
               
152-326
               

               
Cow position:
               
chr4:46183284-46183463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
152-366
               

               
Cow position:
               
chr4:47280013-47280223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
142, 38
               

               
Conread position:
               
152-400
               

               
Cow position:
               
chr4:14500379-14500113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
153-311
               

               
Cow position:
               
chr4:37732608-37732448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
153-374
               

               
Cow position:
               
chr4:45636039-45636270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
38, 47
               

               
Conread position:
               
153-393
               

               
Cow position:
               
chr4:45073939-45074179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
153-433
               

               
Cow position:
               
chr4:55508365-55508076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
141, 23
               

               
Conread position:
               
153-435
               

               
Cow position:
               
chr4:34700163-34699857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
44, 153
               

               
Conread position:
               
153-491
               

               
Cow position:
               
chr4:48173014-48173353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
154-491
               

               
Cow position:
               
chr4:38946084-38946438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
154-496
               

               
Cow position:
               
chr4:52779728-52780094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
160-370
               

               
Cow position:
               
chr4:11380166-11380379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
161-295
               

               
Cow position:
               
chr4:46494179-46494312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
163-307
               

               
Cow position:
               
chr4:60215570-60215426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
163-350
               

               
Cow position:
               
chr4:37675500-37675693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
166-366
               

               
Cow position:
               
chr4:19098357-19098568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
169-434
               

               
Cow position:
               
chr4:61066665-61066939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
29, 157
               

               
Conread position:
               
169-481
               

               
Cow position:
               
chr4:20143012-20142702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
176-366
               

               
Cow position:
               
chr4:47510288-47510480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
187-438
               

               
Cow position:
               
chr4:63472163-63471900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
190-366
               

               
Cow position:
               
chr4:19102971-19102786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
194-366
               

               
Cow position:
               
chr4:54921169-54920994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
195-499
               

               
Cow position:
               
chr4:45705963-45706272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
207-373
               

               
Cow position:
               
chr4:26012326-26012503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
207-373
               

               
Cow position:
               
chr4:26830632-26830809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
207-485
               

               
Cow position:
               
chr4:44773116-44772825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 185
               

               
Conread position:
               
226-437
               

               
Cow position:
               
chr4:38700211-38699986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
229-366
               

               
Cow position:
               
chr4:51920494-51920640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
230-467
               

               
Cow position:
               
chr4:31758218-31758466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 223
               

               
Conread position:
               
239-445
               

               
Cow position:
               
chr4:36517520-36517302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 47
               

               
Conread position:
               
244-438
               

               
Cow position:
               
chr4:64029084-64029283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
81, 49
               

               
Conread position:
               
282-438
               

               
Cow position:
               
chr4:54501018-54500854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
326-444
               

               
Cow position:
               
chr4:64494858-64494979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
370-528
               

               
Cow position:
               
chr4:58045510-58045356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               
Show alignments to all cow chromosomes.