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Cow genome map

           
Conread name:
           
Ss1.1-rfce22c_a4.5
        

               
Conread position:
               
4-297
               

               
Cow position:
               
chr5:27015439-27015734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
4-320
               

               
Cow position:
               
chr5:6504123-6503804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr5:65933180-65932932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr5:19470435-19470158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr5:7921634-7921351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
5-302
               

               
Cow position:
               
chr5:360197-359880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr5:32378620-32378956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
5-370
               

               
Cow position:
               
chr5:20783374-20783755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
6-294
               

               
Cow position:
               
chr5:7140345-7140056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
15-287
               

               
Cow position:
               
chr5:20344925-20345205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
15-320
               

               
Cow position:
               
chr5:14904314-14903991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
10, 141
               

               
Conread position:
               
16-366
               

               
Cow position:
               
chr5:26477238-26476889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
16-473
               

               
Cow position:
               
chr5:69337587-69338063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 147
               

               
Conread position:
               
17-446
               

               
Cow position:
               
chr5:3242707-3242261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 139
               

               
Conread position:
               
20-310
               

               
Cow position:
               
chr5:2500422-2500112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
22-218
               

               
Cow position:
               
chr5:26370468-26370669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
22-291
               

               
Cow position:
               
chr5:24485652-24485387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
20, 15
               

               
Conread position:
               
22-370
               

               
Cow position:
               
chr5:16206381-16206022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
22-435
               

               
Cow position:
               
chr5:25919853-25919433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 147
               

               
Conread position:
               
23-245
               

               
Cow position:
               
chr5:31020352-31020138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
24-476
               

               
Cow position:
               
chr5:72903461-72902997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 186
               

               
Conread position:
               
25-359
               

               
Cow position:
               
chr5:65588476-65588821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 132
               

               
Conread position:
               
26-190
               

               
Cow position:
               
chr5:24837175-24837001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
36-326
               

               
Cow position:
               
chr5:34977050-34976759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
47-513
               

               
Cow position:
               
chr5:6286627-6286155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
49-179
               

               
Cow position:
               
chr5:53825321-53825448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
49-362
               

               
Cow position:
               
chr5:57575566-57575898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
57, 108
               

               
Conread position:
               
50-184
               

               
Cow position:
               
chr5:41981203-41981336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
50-184
               

               
Cow position:
               
chr5:61455556-61455698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
50-189
               

               
Cow position:
               
chr5:2851115-2851262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 129
               

               
Conread position:
               
50-190
               

               
Cow position:
               
chr5:15462516-15462660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
50-190
               

               
Cow position:
               
chr5:33537692-33537833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
50-208
               

               
Cow position:
               
chr5:12563205-12563042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
33, 155
               

               
Conread position:
               
50-213
               

               
Cow position:
               
chr5:63917609-63917441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
50-215
               

               
Cow position:
               
chr5:37366699-37366872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 107
               

               
Conread position:
               
50-221
               

               
Cow position:
               
chr5:21524966-21525148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
50-221
               

               
Cow position:
               
chr5:50729297-50729471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
54, 152
               

               
Conread position:
               
50-230
               

               
Cow position:
               
chr5:5848385-5848203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
50-231
               

               
Cow position:
               
chr5:60519968-60520149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
50-231
               

               
Cow position:
               
chr5:64392956-64393145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
50-234
               

               
Cow position:
               
chr5:3492003-3492185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
50-236
               

               
Cow position:
               
chr5:57271463-57271273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
52, 152
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr5:6575786-6575597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr5:32963828-32963637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
56, 106
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr5:45705849-45706039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
62, 133
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr5:61600214-61600412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
54, 194
               

               
Conread position:
               
50-239
               

               
Cow position:
               
chr5:44583317-44583133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
50-240
               

               
Cow position:
               
chr5:45036823-45037017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
54, 120
               

               
Conread position:
               
50-241
               

               
Cow position:
               
chr5:14415574-14415770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
50-257
               

               
Cow position:
               
chr5:42747959-42748170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
50-257
               

               
Cow position:
               
chr5:56433600-56433819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 107
               

               
Conread position:
               
50-269
               

               
Cow position:
               
chr5:9859917-9859686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
54, 109
               

               
Conread position:
               
50-269
               

               
Cow position:
               
chr5:50950355-50950579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
51, 106
               

               
Conread position:
               
50-269
               

               
Cow position:
               
chr5:72150053-72150275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
141, 99
               

               
Conread position:
               
50-276
               

               
Cow position:
               
chr5:34288668-34288436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr5:8994764-8994526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr5:23856360-23856121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
94, 153
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr5:54064581-54064815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 153
               

               
Conread position:
               
50-284
               

               
Cow position:
               
chr5:50975687-50975942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
50-286
               

               
Cow position:
               
chr5:16184891-16185130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr5:30639051-30638820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
208, 51
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr5:49820944-49821183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr5:51490952-51490721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
142, 21
               

               
Conread position:
               
50-290
               

               
Cow position:
               
chr5:17063292-17063040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 109
               

               
Conread position:
               
50-292
               

               
Cow position:
               
chr5:1779460-1779237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
209, 35
               

               
Conread position:
               
50-292
               

               
Cow position:
               
chr5:59443450-59443204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 107
               

               
Conread position:
               
50-293
               

               
Cow position:
               
chr5:14420543-14420299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 146
               

               
Conread position:
               
50-293
               

               
Cow position:
               
chr5:59298157-59297916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
54, 134
               

               
Conread position:
               
50-294
               

               
Cow position:
               
chr5:35235907-35235659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr5:1027890-1027643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr5:10261437-10261182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 147
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr5:27403442-27403178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr5:32975750-32975502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 181
               

               
Conread position:
               
50-296
               

               
Cow position:
               
chr5:56135167-56134911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 136
               

               
Conread position:
               
50-296
               

               
Cow position:
               
chr5:62826952-62826700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
50-300
               

               
Cow position:
               
chr5:34115464-34115709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
141, 49
               

               
Conread position:
               
50-302
               

               
Cow position:
               
chr5:54405094-54404831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
55, 87
               

               
Conread position:
               
50-303
               

               
Cow position:
               
chr5:1766542-1766291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
51, 113
               

               
Conread position:
               
50-303
               

               
Cow position:
               
chr5:43474649-43474904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr5:34506124-34505861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 128
               

               
Conread position:
               
50-309
               

               
Cow position:
               
chr5:56518408-56518156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
55, 106
               

               
Conread position:
               
50-310
               

               
Cow position:
               
chr5:75230485-75230734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
56, 149
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr5:33414606-33414339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr5:41951283-41951027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr5:44049504-44049767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
94, 151
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr5:59127-58857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
68, 139
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr5:32153514-32153244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 135
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr5:39936904-39937190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 132
               

               
Conread position:
               
50-319
               

               
Cow position:
               
chr5:31480956-31481224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
141, 72
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr5:3771648-3771923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 156
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr5:9390337-9390630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
58, 122
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr5:14550784-14550507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 185
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr5:32140905-32140631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr5:39094355-39094627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
46, 154
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr5:29212750-29213018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr5:40889482-40889217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
58, 145
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr5:42845799-42845513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr5:35449055-35449317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr5:3281633-3281918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 135
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr5:5938126-5938405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 209
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr5:16508897-16509189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr5:20127856-20128135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr5:23140771-23140506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr5:31918456-31918725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr5:32394402-32394682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 115
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr5:34049911-34050201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 158
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr5:35208063-35208344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 108
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr5:42064004-42064288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr5:45409127-45409406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr5:47313275-47313556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
46, 155
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr5:55756638-55756335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
50-329
               

               
Cow position:
               
chr5:57327591-57327876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 160
               

               
Conread position:
               
50-329
               

               
Cow position:
               
chr5:58144802-58144516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 155
               

               
Conread position:
               
50-332
               

               
Cow position:
               
chr5:46122549-46122263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
48, 107
               

               
Conread position:
               
50-333
               

               
Cow position:
               
chr5:56820458-56820174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 26
               

               
Conread position:
               
50-348
               

               
Cow position:
               
chr5:52645274-52644969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 100
               

               
Conread position:
               
50-350
               

               
Cow position:
               
chr5:34528363-34528655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 105
               

               
Conread position:
               
50-351
               

               
Cow position:
               
chr5:43738150-43737849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
50-356
               

               
Cow position:
               
chr5:32697011-32696704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 47
               

               
Conread position:
               
50-358
               

               
Cow position:
               
chr5:31640229-31640546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
50-358
               

               
Cow position:
               
chr5:58793813-58793486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
50-360
               

               
Cow position:
               
chr5:41129567-41129865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
209, 99
               

               
Conread position:
               
50-360
               

               
Cow position:
               
chr5:56028729-56028418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 107
               

               
Conread position:
               
50-361
               

               
Cow position:
               
chr5:42744595-42744904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 38
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr5:20779580-20779273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
196, 99
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr5:37645875-37646206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 82
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr5:44752509-44752182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
45, 103
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr5:57736916-57737224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 99
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr5:60715553-60715243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
50-364
               

               
Cow position:
               
chr5:49685479-49685148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 213
               

               
Conread position:
               
50-365
               

               
Cow position:
               
chr5:58855905-58856230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr5:15478915-15479254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
58, 171
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr5:26990194-26990517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
7, 103
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr5:27154824-27155134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
48, 106
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr5:28229959-28230293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
54, 99
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr5:29827855-29828175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 102
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr5:46323010-46322674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr5:50533581-50533259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
141, 99
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr5:51053846-51053520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr5:53855505-53855835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr5:54350559-54350232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr5:55176688-55177015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 109
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr5:62142472-62142805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr5:64321550-64321878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr5:71494618-71494950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 160
               

               
Conread position:
               
50-367
               

               
Cow position:
               
chr5:11427440-11427105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 159
               

               
Conread position:
               
50-368
               

               
Cow position:
               
chr5:6683546-6683235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr5:34300728-34301048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 43
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:11229872-11229540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 106
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:12709687-12709999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 155
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:17087227-17086888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:21617257-21617591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:27306120-27306437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:35684736-35685068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
61, 107
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:37646749-37646411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:37814425-37814759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
51, 85
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:39447729-39447399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:41546092-41545760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:43929932-43929603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:44054236-44053922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 96
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:53835516-53835849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 103
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:57626608-57626921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:66257444-66257769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr5:74643860-74643545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
147, 44
               

               
Conread position:
               
50-371
               

               
Cow position:
               
chr5:63992361-63992038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
57, 91
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr5:45803862-45804195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 106
               

               
Conread position:
               
50-373
               

               
Cow position:
               
chr5:15722253-15721938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
50-373
               

               
Cow position:
               
chr5:46510065-46509728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 104
               

               
Conread position:
               
50-373
               

               
Cow position:
               
chr5:50821590-50821919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 45
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr5:5111275-5110932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr5:26097097-26097426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 182
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr5:29771316-29771665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
56, 107
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr5:37377677-37377990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
209, 80
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr5:59326027-59325705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
50-377
               

               
Cow position:
               
chr5:6045089-6045436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-380
               

               
Cow position:
               
chr5:3204637-3204969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
50-394
               

               
Cow position:
               
chr5:30844912-30845264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 103
               

               
Conread position:
               
50-394
               

               
Cow position:
               
chr5:45845894-45845530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-394
               

               
Cow position:
               
chr5:65941452-65941093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
50-399
               

               
Cow position:
               
chr5:26467421-26467793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-400
               

               
Cow position:
               
chr5:2309762-2309392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
57, 174
               

               
Conread position:
               
50-402
               

               
Cow position:
               
chr5:64176319-64175962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-402
               

               
Cow position:
               
chr5:72564563-72564938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
50-423
               

               
Cow position:
               
chr5:26377865-26377470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 101
               

               
Conread position:
               
50-424
               

               
Cow position:
               
chr5:63964371-63963981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
57, 157
               

               
Conread position:
               
50-434
               

               
Cow position:
               
chr5:43923348-43922950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
33, 38
               

               
Conread position:
               
50-434
               

               
Cow position:
               
chr5:72007051-72006661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr5:24175172-24175573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
50-436
               

               
Cow position:
               
chr5:6528482-6528887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
50-436
               

               
Cow position:
               
chr5:27419919-27419525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
50-437
               

               
Cow position:
               
chr5:44848215-44847803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr5:8024391-8023990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr5:18898785-18899181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 99
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr5:27102986-27102588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
64, 82
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr5:28224256-28224667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 13
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr5:28927791-28927398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 109
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr5:40039969-40039564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 88
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr5:47547915-47547521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr5:57935312-57934895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr5:75437095-75436687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
58, 335
               

               
Conread position:
               
50-442
               

               
Cow position:
               
chr5:16938206-16937804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
50-443
               

               
Cow position:
               
chr5:35145154-35145566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
50-444
               

               
Cow position:
               
chr5:16893974-16893547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-444
               

               
Cow position:
               
chr5:30276493-30276919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
50-446
               

               
Cow position:
               
chr5:14314323-14314749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
50-446
               

               
Cow position:
               
chr5:35763092-35763477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 46
               

               
Conread position:
               
50-446
               

               
Cow position:
               
chr5:42667587-42667192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
50-446
               

               
Cow position:
               
chr5:47871249-47870821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 239
               

               
Conread position:
               
50-450
               

               
Cow position:
               
chr5:28302938-28302519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
50-458
               

               
Cow position:
               
chr5:4218679-4219065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 90
               

               
Conread position:
               
50-467
               

               
Cow position:
               
chr5:21828666-21829104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
50-467
               

               
Cow position:
               
chr5:52165381-52164944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 157
               

               
Conread position:
               
50-469
               

               
Cow position:
               
chr5:47601618-47602048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
50, 106
               

               
Conread position:
               
50-469
               

               
Cow position:
               
chr5:56467502-56467927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
50-473
               

               
Cow position:
               
chr5:45226022-45225581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
50-474
               

               
Cow position:
               
chr5:55068519-55068939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
209, 29
               

               
Conread position:
               
50-476
               

               
Cow position:
               
chr5:44796917-44796489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 58
               

               
Conread position:
               
50-479
               

               
Cow position:
               
chr5:12322999-12322567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
61, 103
               

               
Conread position:
               
50-479
               

               
Cow position:
               
chr5:37941991-37941539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 156
               

               
Conread position:
               
50-481
               

               
Cow position:
               
chr5:24348913-24349360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 149
               

               
Conread position:
               
50-481
               

               
Cow position:
               
chr5:38832921-38833368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
57, 107
               

               
Conread position:
               
50-484
               

               
Cow position:
               
chr5:11668377-11667937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 80
               

               
Conread position:
               
50-497
               

               
Cow position:
               
chr5:50943352-50942903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
50-502
               

               
Cow position:
               
chr5:36868547-36869002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
190, 74
               

               
Conread position:
               
50-517
               

               
Cow position:
               
chr5:4617175-4617642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
50-536
               

               
Cow position:
               
chr5:34463784-34463285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 154
               

               
Conread position:
               
50-539
               

               
Cow position:
               
chr5:15363692-15364196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
51-299
               

               
Cow position:
               
chr5:3281069-3280816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
51-439
               

               
Cow position:
               
chr5:15426328-15426729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
53, 106
               

               
Conread position:
               
51-451
               

               
Cow position:
               
chr5:62870234-62869824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 102
               

               
Conread position:
               
52-293
               

               
Cow position:
               
chr5:41522992-41522753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
52, 140
               

               
Conread position:
               
52-320
               

               
Cow position:
               
chr5:13691771-13691490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
52-326
               

               
Cow position:
               
chr5:47704330-47704043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
57, 158
               

               
Conread position:
               
52-333
               

               
Cow position:
               
chr5:28926384-28926091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 157
               

               
Conread position:
               
52-438
               

               
Cow position:
               
chr5:30302699-30303106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
59, 102
               

               
Conread position:
               
53-250
               

               
Cow position:
               
chr5:49558972-49559176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 89
               

               
Conread position:
               
53-251
               

               
Cow position:
               
chr5:40357065-40356858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
53-292
               

               
Cow position:
               
chr5:26790647-26790407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
98, 156
               

               
Conread position:
               
53-316
               

               
Cow position:
               
chr5:64823508-64823237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
51, 102
               

               
Conread position:
               
53-320
               

               
Cow position:
               
chr5:65601265-65601534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
72, 144
               

               
Conread position:
               
53-323
               

               
Cow position:
               
chr5:12149350-12149626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
58, 137
               

               
Conread position:
               
53-326
               

               
Cow position:
               
chr5:26094365-26094083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
44, 149
               

               
Conread position:
               
53-326
               

               
Cow position:
               
chr5:47317165-47316891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
53-326
               

               
Cow position:
               
chr5:61839991-61840271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
58, 155
               

               
Conread position:
               
53-362
               

               
Cow position:
               
chr5:458286-458613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 203
               

               
Conread position:
               
53-366
               

               
Cow position:
               
chr5:18573975-18574302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
52, 121
               

               
Conread position:
               
53-366
               

               
Cow position:
               
chr5:43992130-43992453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
53-366
               

               
Cow position:
               
chr5:63987643-63987317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 148
               

               
Conread position:
               
53-366
               

               
Cow position:
               
chr5:65776581-65776255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 106
               

               
Conread position:
               
53-368
               

               
Cow position:
               
chr5:62172223-62172543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 99
               

               
Conread position:
               
53-370
               

               
Cow position:
               
chr5:41164893-41165221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 89
               

               
Conread position:
               
53-373
               

               
Cow position:
               
chr5:7044905-7044569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
53-375
               

               
Cow position:
               
chr5:64139367-64139698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
53-423
               

               
Cow position:
               
chr5:54311138-54311522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
53-469
               

               
Cow position:
               
chr5:34561813-34562249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
55, 106
               

               
Conread position:
               
53-478
               

               
Cow position:
               
chr5:50722855-50723289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
54-221
               

               
Cow position:
               
chr5:28330526-28330356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
84, 147
               

               
Conread position:
               
54-251
               

               
Cow position:
               
chr5:55821172-55821380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 202
               

               
Conread position:
               
54-257
               

               
Cow position:
               
chr5:64844312-64844107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
129, 149
               

               
Conread position:
               
54-293
               

               
Cow position:
               
chr5:60126179-60126422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 87
               

               
Conread position:
               
54-319
               

               
Cow position:
               
chr5:20554944-20554678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
50, 128
               

               
Conread position:
               
54-320
               

               
Cow position:
               
chr5:73080018-73080282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
140, 22
               

               
Conread position:
               
54-323
               

               
Cow position:
               
chr5:47756574-47756852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 158
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr5:8163018-8162735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr5:64137057-64137339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr5:65887209-65886927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 157
               

               
Conread position:
               
54-332
               

               
Cow position:
               
chr5:34638691-34638973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
54-362
               

               
Cow position:
               
chr5:35969348-35969657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 110
               

               
Conread position:
               
54-362
               

               
Cow position:
               
chr5:64758958-64758642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr5:5257491-5257159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr5:15598428-15598109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
54-370
               

               
Cow position:
               
chr5:23169013-23168693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
198, 54
               

               
Conread position:
               
54-370
               

               
Cow position:
               
chr5:25035421-25035125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 41
               

               
Conread position:
               
54-435
               

               
Cow position:
               
chr5:30487050-30487449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 23
               

               
Conread position:
               
54-438
               

               
Cow position:
               
chr5:16025655-16025258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
54-444
               

               
Cow position:
               
chr5:47888909-47888499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 154
               

               
Conread position:
               
55-186
               

               
Cow position:
               
chr5:22565450-22565583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 50
               

               
Conread position:
               
55-320
               

               
Cow position:
               
chr5:17999688-17999419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
50, 150
               

               
Conread position:
               
55-326
               

               
Cow position:
               
chr5:41636679-41636951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 96
               

               
Conread position:
               
55-362
               

               
Cow position:
               
chr5:22643411-22643107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
55-362
               

               
Cow position:
               
chr5:36855019-36855331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 56
               

               
Conread position:
               
55-366
               

               
Cow position:
               
chr5:8821205-8820884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 103
               

               
Conread position:
               
55-370
               

               
Cow position:
               
chr5:44994231-44993916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
55-374
               

               
Cow position:
               
chr5:43457712-43457394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
53, 101
               

               
Conread position:
               
55-377
               

               
Cow position:
               
chr5:52000025-52000358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 102
               

               
Conread position:
               
55-435
               

               
Cow position:
               
chr5:40388059-40387679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
69, 48
               

               
Conread position:
               
55-437
               

               
Cow position:
               
chr5:48573954-48573576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
55-437
               

               
Cow position:
               
chr5:58320655-58320266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 91
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr5:17027901-17028301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 103
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr5:27615322-27615718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
67, 132
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr5:39442100-39442502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr5:40711636-40711241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 92
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr5:48757751-48758146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
55-439
               

               
Cow position:
               
chr5:46611279-46610891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
154, 66
               

               
Conread position:
               
55-444
               

               
Cow position:
               
chr5:68082160-68081769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
55-465
               

               
Cow position:
               
chr5:28946252-28945827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 64
               

               
Conread position:
               
55-467
               

               
Cow position:
               
chr5:41604419-41604855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 162
               

               
Conread position:
               
56-287
               

               
Cow position:
               
chr5:40152283-40152522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
56-323
               

               
Cow position:
               
chr5:5855687-5855938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
203, 82
               

               
Conread position:
               
57-366
               

               
Cow position:
               
chr5:4220789-4221107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
58-218
               

               
Cow position:
               
chr5:50870351-50870522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
58-219
               

               
Cow position:
               
chr5:63388604-63388769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
58-284
               

               
Cow position:
               
chr5:34915951-34916171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
53, 89
               

               
Conread position:
               
58-295
               

               
Cow position:
               
chr5:18090537-18090789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
58-302
               

               
Cow position:
               
chr5:34885346-34885104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 134
               

               
Conread position:
               
58-323
               

               
Cow position:
               
chr5:50637639-50637901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
53, 68
               

               
Conread position:
               
58-367
               

               
Cow position:
               
chr5:61725779-61726094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
58-370
               

               
Cow position:
               
chr5:4710333-4710019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
58-370
               

               
Cow position:
               
chr5:22242976-22242632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
50, 151
               

               
Conread position:
               
58-371
               

               
Cow position:
               
chr5:21040164-21039849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
58-394
               

               
Cow position:
               
chr5:9090214-9089872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
58-419
               

               
Cow position:
               
chr5:26595295-26594912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
58-437
               

               
Cow position:
               
chr5:71454785-71454407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
58-438
               

               
Cow position:
               
chr5:6572561-6572956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 97
               

               
Conread position:
               
58-438
               

               
Cow position:
               
chr5:25900060-25899670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
58-438
               

               
Cow position:
               
chr5:34441982-34441575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
58-439
               

               
Cow position:
               
chr5:74003818-74003427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
51, 45
               

               
Conread position:
               
58-461
               

               
Cow position:
               
chr5:33080979-33080561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
56, 143
               

               
Conread position:
               
58-486
               

               
Cow position:
               
chr5:69461144-69461590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
59-250
               

               
Cow position:
               
chr5:52040509-52040310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 196
               

               
Conread position:
               
59-318
               

               
Cow position:
               
chr5:66403954-66404208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
59-326
               

               
Cow position:
               
chr5:57591501-57591771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 121
               

               
Conread position:
               
59-362
               

               
Cow position:
               
chr5:13536967-13537257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
132, 87
               

               
Conread position:
               
59-370
               

               
Cow position:
               
chr5:69731328-69731633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
132, 65
               

               
Conread position:
               
59-374
               

               
Cow position:
               
chr5:65752667-65752996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
49, 144
               

               
Conread position:
               
59-430
               

               
Cow position:
               
chr5:48010036-48009664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 92
               

               
Conread position:
               
62-311
               

               
Cow position:
               
chr5:6670384-6670125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
43, 95
               

               
Conread position:
               
63-497
               

               
Cow position:
               
chr5:46512952-46512508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
45, 96
               

               
Conread position:
               
64-221
               

               
Cow position:
               
chr5:31469769-31469605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
64-237
               

               
Cow position:
               
chr5:4507145-4506961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
64-282
               

               
Cow position:
               
chr5:17644840-17644616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 139
               

               
Conread position:
               
64-285
               

               
Cow position:
               
chr5:28324161-28324396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
64-297
               

               
Cow position:
               
chr5:53842104-53842334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
127, 85
               

               
Conread position:
               
64-301
               

               
Cow position:
               
chr5:54713921-54713673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
44, 196
               

               
Conread position:
               
64-306
               

               
Cow position:
               
chr5:1678215-1678455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
64-312
               

               
Cow position:
               
chr5:72287096-72286846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 138
               

               
Conread position:
               
64-366
               

               
Cow position:
               
chr5:4032173-4031857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
64-366
               

               
Cow position:
               
chr5:61810608-61810900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
127, 60
               

               
Conread position:
               
64-370
               

               
Cow position:
               
chr5:56070668-56070992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 93
               

               
Conread position:
               
64-433
               

               
Cow position:
               
chr5:7723486-7723864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 138
               

               
Conread position:
               
64-438
               

               
Cow position:
               
chr5:29903706-29903318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
64-438
               

               
Cow position:
               
chr5:31561351-31561730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 139
               

               
Conread position:
               
64-438
               

               
Cow position:
               
chr5:40928158-40927789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
64-438
               

               
Cow position:
               
chr5:68330167-68329783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
64-441
               

               
Cow position:
               
chr5:42677050-42677427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 109
               

               
Conread position:
               
65-295
               

               
Cow position:
               
chr5:49362175-49361941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 121
               

               
Conread position:
               
65-362
               

               
Cow position:
               
chr5:3639666-3639372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
65-362
               

               
Cow position:
               
chr5:19813397-19813095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
65-366
               

               
Cow position:
               
chr5:37808848-37808534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
65-374
               

               
Cow position:
               
chr5:24996409-24996086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
66-309
               

               
Cow position:
               
chr5:48828973-48829220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
66-350
               

               
Cow position:
               
chr5:55928760-55929057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
66-362
               

               
Cow position:
               
chr5:47323268-47323587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 197
               

               
Conread position:
               
66-370
               

               
Cow position:
               
chr5:30253559-30253874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
66-465
               

               
Cow position:
               
chr5:39695467-39695883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
66-488
               

               
Cow position:
               
chr5:57074517-57074086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
67-430
               

               
Cow position:
               
chr5:39242371-39242019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
287, 79
               

               
Conread position:
               
68-189
               

               
Cow position:
               
chr5:6033058-6033184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
68-366
               

               
Cow position:
               
chr5:39258353-39258634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
190, 44
               

               
Conread position:
               
68-476
               

               
Cow position:
               
chr5:43858608-43858179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
69-287
               

               
Cow position:
               
chr5:51151542-51151317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 153
               

               
Conread position:
               
70-365
               

               
Cow position:
               
chr5:44028480-44028179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
41, 84
               

               
Conread position:
               
70-464
               

               
Cow position:
               
chr5:3668719-3669110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 135
               

               
Conread position:
               
71-312
               

               
Cow position:
               
chr5:28957794-28957545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 127
               

               
Conread position:
               
72-320
               

               
Cow position:
               
chr5:51935006-51935267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 185
               

               
Conread position:
               
73-326
               

               
Cow position:
               
chr5:69520715-69520974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
35, 94
               

               
Conread position:
               
74-212
               

               
Cow position:
               
chr5:45026092-45025950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
74-326
               

               
Cow position:
               
chr5:72035259-72035015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 101
               

               
Conread position:
               
74-473
               

               
Cow position:
               
chr5:3627330-3626920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
75-438
               

               
Cow position:
               
chr5:3549951-3549580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
76-313
               

               
Cow position:
               
chr5:21964119-21964359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
76-435
               

               
Cow position:
               
chr5:41452839-41452469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
78-324
               

               
Cow position:
               
chr5:30178681-30178423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
78-367
               

               
Cow position:
               
chr5:55955735-55956043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
79-302
               

               
Cow position:
               
chr5:12866998-12866759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
29, 181
               

               
Conread position:
               
82-437
               

               
Cow position:
               
chr5:19294643-19294295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
82-438
               

               
Cow position:
               
chr5:44447027-44446650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
108, 18
               

               
Conread position:
               
83-277
               

               
Cow position:
               
chr5:6130187-6130387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
83-378
               

               
Cow position:
               
chr5:30950085-30949774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
84-393
               

               
Cow position:
               
chr5:11540208-11539899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
107, 115
               

               
Conread position:
               
85-255
               

               
Cow position:
               
chr5:64060457-64060284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
85-268
               

               
Cow position:
               
chr5:41486901-41486713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 116
               

               
Conread position:
               
85-374
               

               
Cow position:
               
chr5:54060110-54060413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
86-326
               

               
Cow position:
               
chr5:57768135-57767902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
96, 32
               

               
Conread position:
               
86-360
               

               
Cow position:
               
chr5:21920205-21920494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
20, 124
               

               
Conread position:
               
87-369
               

               
Cow position:
               
chr5:14629974-14629673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
88-400
               

               
Cow position:
               
chr5:45397418-45397733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
16, 65
               

               
Conread position:
               
92-269
               

               
Cow position:
               
chr5:44849879-44849706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
92-370
               

               
Cow position:
               
chr5:70952029-70951756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
92-440
               

               
Cow position:
               
chr5:56877336-56877697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
202, 58
               

               
Conread position:
               
95-466
               

               
Cow position:
               
chr5:42050403-42050781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
97-302
               

               
Cow position:
               
chr5:23866308-23866112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
97-438
               

               
Cow position:
               
chr5:27411538-27411200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
98-287
               

               
Cow position:
               
chr5:71579028-71579219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
98-320
               

               
Cow position:
               
chr5:29097213-29097445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
98-350
               

               
Cow position:
               
chr5:35459445-35459180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
98-483
               

               
Cow position:
               
chr5:35247256-35246861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 84
               

               
Conread position:
               
101-438
               

               
Cow position:
               
chr5:29844136-29844486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
97, 50
               

               
Conread position:
               
103-295
               

               
Cow position:
               
chr5:51801111-51800921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
104-282
               

               
Cow position:
               
chr5:43816748-43816567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
136, 93
               

               
Conread position:
               
104-295
               

               
Cow position:
               
chr5:12761256-12761067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 98
               

               
Conread position:
               
104-320
               

               
Cow position:
               
chr5:65883916-65883695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 97
               

               
Conread position:
               
104-326
               

               
Cow position:
               
chr5:67540343-67540118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
104-333
               

               
Cow position:
               
chr5:50972390-50972615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
104-370
               

               
Cow position:
               
chr5:65967868-65967598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
136, 45
               

               
Conread position:
               
104-470
               

               
Cow position:
               
chr5:66972287-66972663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
84, 95
               

               
Conread position:
               
104-498
               

               
Cow position:
               
chr5:38629149-38629560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
104-507
               

               
Cow position:
               
chr5:20843512-20843104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
106-320
               

               
Cow position:
               
chr5:25447426-25447641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
106-438
               

               
Cow position:
               
chr5:50684121-50684465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
152, 10
               

               
Conread position:
               
107-326
               

               
Cow position:
               
chr5:14473550-14473321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
107-460
               

               
Cow position:
               
chr5:23529410-23529057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
108-312
               

               
Cow position:
               
chr5:19335924-19335712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
108-444
               

               
Cow position:
               
chr5:72951703-72952055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
109-439
               

               
Cow position:
               
chr5:47696574-47696232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
125, 16
               

               
Conread position:
               
112-323
               

               
Cow position:
               
chr5:991334-991544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
112-326
               

               
Cow position:
               
chr5:45273633-45273418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
112-346
               

               
Cow position:
               
chr5:32673194-32672960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 87
               

               
Conread position:
               
112-366
               

               
Cow position:
               
chr5:54768042-54767780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 87
               

               
Conread position:
               
116-287
               

               
Cow position:
               
chr5:58490589-58490765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
116-446
               

               
Cow position:
               
chr5:49474670-49474321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
117-477
               

               
Cow position:
               
chr5:18289002-18289362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
77, 163
               

               
Conread position:
               
118-480
               

               
Cow position:
               
chr5:56680121-56680496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
119-401
               

               
Cow position:
               
chr5:6891143-6890854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
78, 40
               

               
Conread position:
               
120-380
               

               
Cow position:
               
chr5:53710820-53710546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
121-326
               

               
Cow position:
               
chr5:19523775-19523983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 5
               

               
Conread position:
               
125-433
               

               
Cow position:
               
chr5:16179644-16179303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
73, 60
               

               
Conread position:
               
127-399
               

               
Cow position:
               
chr5:33560851-33560573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
128-435
               

               
Cow position:
               
chr5:51065415-51065737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
129-326
               

               
Cow position:
               
chr5:12901800-12902000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
132-326
               

               
Cow position:
               
chr5:57561405-57561606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
132-367
               

               
Cow position:
               
chr5:13717683-13717440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
132-374
               

               
Cow position:
               
chr5:58446691-58446944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
134-374
               

               
Cow position:
               
chr5:23678814-23678566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
17, 177
               

               
Conread position:
               
140-326
               

               
Cow position:
               
chr5:56635796-56635978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
141-293
               

               
Cow position:
               
chr5:60448112-60448265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
141-370
               

               
Cow position:
               
chr5:36039107-36038868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 10
               

               
Conread position:
               
141-438
               

               
Cow position:
               
chr5:35785079-35784780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 46
               

               
Conread position:
               
143-362
               

               
Cow position:
               
chr5:41293979-41294205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
143-380
               

               
Cow position:
               
chr5:45420231-45419994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
117, 43
               

               
Conread position:
               
147-326
               

               
Cow position:
               
chr5:1087293-1087116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
147-439
               

               
Cow position:
               
chr5:35976422-35976720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 54
               

               
Conread position:
               
149-270
               

               
Cow position:
               
chr5:23866772-23866654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
150-281
               

               
Cow position:
               
chr5:29860252-29860388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
152-326
               

               
Cow position:
               
chr5:34192809-34192990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
152-326
               

               
Cow position:
               
chr5:35125960-35126138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
152-362
               

               
Cow position:
               
chr5:55019201-55019417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
152-445
               

               
Cow position:
               
chr5:50575692-50576000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
156-350
               

               
Cow position:
               
chr5:57527007-57526816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
165-366
               

               
Cow position:
               
chr5:55796043-55795837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
95, 11
               

               
Conread position:
               
175-357
               

               
Cow position:
               
chr5:67212286-67212481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
177-362
               

               
Cow position:
               
chr5:22445847-22446036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
181-471
               

               
Cow position:
               
chr5:1461023-1461313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
190-369
               

               
Cow position:
               
chr5:63627578-63627403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
199-434
               

               
Cow position:
               
chr5:56153569-56153820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
202-443
               

               
Cow position:
               
chr5:40237171-40237419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
207-362
               

               
Cow position:
               
chr5:49501862-49501699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
209-475
               

               
Cow position:
               
chr5:57101561-57101286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 161
               

               
Conread position:
               
217-366
               

               
Cow position:
               
chr5:57230367-57230209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
223-366
               

               
Cow position:
               
chr5:45574386-45574236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
227-435
               

               
Cow position:
               
chr5:23527648-23527427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
368-519
               

               
Cow position:
               
chr5:25531383-25531534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.