Cow genome map

Conread name: Ss1.1-rfce22c_a4.5

Conread position: 1-362
Cow position: chrX:44396767-44397135 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 7, 11

Conread position: 5-438
Cow position: chrX:11614470-11614902 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 11

Conread position: 5-442
Cow position: chrX:161177-161631 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 10

Conread position: 5-445
Cow position: chrX:25337926-25338399 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 321
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 37, 9

Conread position: 17-278
Cow position: chrX:30833081-30832817 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 140

Conread position: 22-287
Cow position: chrX:18999660-18999932 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 22, 233

Conread position: 22-311
Cow position: chrX:26876119-26875812 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 20, 142

Conread position: 22-326
Cow position: chrX:24288154-24287849 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 40

Conread position: 22-326
Cow position: chrX:35268652-35268945 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 20, 96

Conread position: 22-366
Cow position: chrX:38218477-38218846 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 20, 144

Conread position: 22-366
Cow position: chrX:41879169-41878804 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 143

Conread position: 22-374
Cow position: chrX:5118723-5118360 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 45

Conread position: 22-531
Cow position: chrX:10412224-10411684 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 147

Conread position: 24-295
Cow position: chrX:48247068-48246795 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 95

Conread position: 28-374
Cow position: chrX:43114939-43115288 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 31

Conread position: 46-251
Cow position: chrX:1505512-1505718 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 11

Conread position: 49-293
Cow position: chrX:34270208-34270452 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 145, 58

Conread position: 49-326
Cow position: chrX:33000705-33000989 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 62, 104

Conread position: 49-370
Cow position: chrX:37781316-37780975 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 114

Conread position: 49-423
Cow position: chrX:31340504-31340902 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 262
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 110

Conread position: 50-158
Cow position: chrX:45976685-45976791 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 50-166
Cow position: chrX:10916557-10916671 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 50-188
Cow position: chrX:29770376-29770229 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 50-189
Cow position: chrX:4942947-4942809 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 50-190
Cow position: chrX:16324161-16324018 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 50-196
Cow position: chrX:877221-877074 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 88

Conread position: 50-216
Cow position: chrX:16541875-16541698 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 50-221
Cow position: chrX:25411639-25411819 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 44, 121

Conread position: 50-221
Cow position: chrX:33020288-33020462 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 128

Conread position: 50-221
Cow position: chrX:38967453-38967626 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 84

Conread position: 50-234
Cow position: chrX:35388103-35387911 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 54, 107

Conread position: 50-238
Cow position: chrX:15485824-15485630 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 56, 155

Conread position: 50-238
Cow position: chrX:19019308-19019110 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 54, 90

Conread position: 50-239
Cow position: chrX:40183547-40183349 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 189

Conread position: 50-241
Cow position: chrX:46315578-46315379 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 110

Conread position: 50-242
Cow position: chrX:40452410-40452212 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 107

Conread position: 50-244
Cow position: chrX:21665791-21665594 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 58, 154

Conread position: 50-249
Cow position: chrX:10437862-10437662 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 144

Conread position: 50-251
Cow position: chrX:20582833-20583029 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 85

Conread position: 50-254
Cow position: chrX:45015389-45015586 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 141, 60

Conread position: 50-257
Cow position: chrX:3653566-3653774 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 92

Conread position: 50-257
Cow position: chrX:42339133-42338936 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 79

Conread position: 50-259
Cow position: chrX:35284426-35284640 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 147, 0

Conread position: 50-278
Cow position: chrX:17908481-17908253 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 63, 101

Conread position: 50-279
Cow position: chrX:9997531-9997298 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 55, 102

Conread position: 50-281
Cow position: chrX:26285782-26286019 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 50, 128

Conread position: 50-284
Cow position: chrX:32128178-32127951 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 50, 125

Conread position: 50-285
Cow position: chrX:47757126-47756886 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 58, 153

Conread position: 50-286
Cow position: chrX:17497899-17498128 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 141, 67

Conread position: 50-286
Cow position: chrX:29509641-29509395 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 58, 155

Conread position: 50-286
Cow position: chrX:40647780-40648029 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 54, 161

Conread position: 50-287
Cow position: chrX:4091450-4091684 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 153

Conread position: 50-287
Cow position: chrX:14924803-14925044 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 58, 17

Conread position: 50-290
Cow position: chrX:41198907-41199155 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 61, 153

Conread position: 50-293
Cow position: chrX:19015245-19015487 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 51, 63

Conread position: 50-293
Cow position: chrX:33466416-33466658 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 56, 118

Conread position: 50-294
Cow position: chrX:35681149-35681393 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 43

Conread position: 50-295
Cow position: chrX:8070899-8070647 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 49, 192

Conread position: 50-295
Cow position: chrX:12018078-12018344 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 54, 169

Conread position: 50-295
Cow position: chrX:25237979-25238232 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 58, 130

Conread position: 50-295
Cow position: chrX:36961438-36961693 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 160

Conread position: 50-295
Cow position: chrX:42874780-42875035 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 205

Conread position: 50-298
Cow position: chrX:15139742-15139492 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 62, 103

Conread position: 50-300
Cow position: chrX:42461943-42461687 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 105

Conread position: 50-302
Cow position: chrX:21593086-21593347 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 157

Conread position: 50-302
Cow position: chrX:22821850-22822106 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 58, 117

Conread position: 50-302
Cow position: chrX:41167162-41166902 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 50-303
Cow position: chrX:19188739-19188992 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 54, 88

Conread position: 50-305
Cow position: chrX:47191596-47191345 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 185, 57

Conread position: 50-310
Cow position: chrX:35409468-35409721 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 101, 43

Conread position: 50-311
Cow position: chrX:35609789-35610059 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 170
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 58, 155

Conread position: 50-312
Cow position: chrX:10831694-10831420 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 50, 107

Conread position: 50-312
Cow position: chrX:20697805-20697539 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 48, 151

Conread position: 50-312
Cow position: chrX:28847076-28846823 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 79

Conread position: 50-314
Cow position: chrX:8899827-8900094 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 57, 161

Conread position: 50-314
Cow position: chrX:36778210-36778476 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 61, 145

Conread position: 50-315
Cow position: chrX:41743715-41743987 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 255

Conread position: 50-318
Cow position: chrX:44192640-44192371 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 27

Conread position: 50-319
Cow position: chrX:3654407-3654685 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 107

Conread position: 50-319
Cow position: chrX:45404031-45403748 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 215

Conread position: 50-319
Cow position: chrX:46722938-46722657 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 159

Conread position: 50-319
Cow position: chrX:47344097-47344373 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 93

Conread position: 50-320
Cow position: chrX:8730882-8731171 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 272

Conread position: 50-320
Cow position: chrX:11844440-11844163 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 38

Conread position: 50-320
Cow position: chrX:25816093-25815823 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 201, 95

Conread position: 50-320
Cow position: chrX:29545077-29544799 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 48, 197

Conread position: 50-320
Cow position: chrX:32171079-32170811 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 107, 46

Conread position: 50-320
Cow position: chrX:34543590-34543862 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 58, 35

Conread position: 50-320
Cow position: chrX:47967402-47967685 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 82

Conread position: 50-320
Cow position: chrX:48195238-48194957 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 50-323
Cow position: chrX:27516335-27516602 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 144, 179

Conread position: 50-326
Cow position: chrX:841961-842241 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 153

Conread position: 50-326
Cow position: chrX:1055587-1055297 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 125

Conread position: 50-326
Cow position: chrX:2467682-2467968 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 159

Conread position: 50-326
Cow position: chrX:4633048-4632773 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 152

Conread position: 50-326
Cow position: chrX:7351102-7351381 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 21

Conread position: 50-326
Cow position: chrX:12290538-12290803 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 206, 61

Conread position: 50-326
Cow position: chrX:12405574-12405297 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 107, 38

Conread position: 50-326
Cow position: chrX:13265817-13265543 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 57, 84

Conread position: 50-326
Cow position: chrX:23563994-23563707 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 56, 206

Conread position: 50-326
Cow position: chrX:26440977-26440701 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 61, 154

Conread position: 50-326
Cow position: chrX:27680204-27680482 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 101

Conread position: 50-326
Cow position: chrX:31250192-31250472 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 61, 90

Conread position: 50-326
Cow position: chrX:31949128-31948851 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 68, 88

Conread position: 50-326
Cow position: chrX:32420021-32420296 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 104

Conread position: 50-326
Cow position: chrX:34238523-34238803 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 58, 136

Conread position: 50-326
Cow position: chrX:34454472-34454741 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 101, 55

Conread position: 50-326
Cow position: chrX:34663041-34662762 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 96, 53

Conread position: 50-326
Cow position: chrX:36975752-36976035 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 58, 153

Conread position: 50-326
Cow position: chrX:38935084-38935363 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 132

Conread position: 50-326
Cow position: chrX:40481070-40480788 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 61, 157

Conread position: 50-326
Cow position: chrX:44054604-44054886 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 56, 158

Conread position: 50-327
Cow position: chrX:22812863-22813147 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 57, 166

Conread position: 50-338
Cow position: chrX:6265783-6265502 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 138, 71

Conread position: 50-358
Cow position: chrX:151704-152016 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 58, 40

Conread position: 50-360
Cow position: chrX:37910255-37910569 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 53

Conread position: 50-361
Cow position: chrX:8797050-8797374 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 260

Conread position: 50-362
Cow position: chrX:15007348-15007023 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 153

Conread position: 50-362
Cow position: chrX:28134148-28134464 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 55, 105

Conread position: 50-362
Cow position: chrX:34441648-34441328 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 17

Conread position: 50-364
Cow position: chrX:34401800-34402134 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 106

Conread position: 50-366
Cow position: chrX:1514598-1514289 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 64

Conread position: 50-366
Cow position: chrX:5872116-5872447 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 160

Conread position: 50-366
Cow position: chrX:5900260-5900592 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 207

Conread position: 50-366
Cow position: chrX:6278703-6278368 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 158

Conread position: 50-366
Cow position: chrX:17725777-17726105 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 235
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 61, 103

Conread position: 50-366
Cow position: chrX:17888603-17888293 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 36

Conread position: 50-366
Cow position: chrX:33639774-33640105 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 58, 136

Conread position: 50-366
Cow position: chrX:38094723-38094390 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 34

Conread position: 50-366
Cow position: chrX:38549251-38549577 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 58, 118

Conread position: 50-366
Cow position: chrX:41238563-41238225 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 61, 167

Conread position: 50-366
Cow position: chrX:42470134-42469811 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 99

Conread position: 50-366
Cow position: chrX:43527306-43527638 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 55, 206

Conread position: 50-366
Cow position: chrX:45113431-45113751 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 96, 61

Conread position: 50-366
Cow position: chrX:45967966-45968278 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 98

Conread position: 50-367
Cow position: chrX:38006965-38006639 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 107

Conread position: 50-369
Cow position: chrX:678765-678441 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 96

Conread position: 50-369
Cow position: chrX:41884615-41884279 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 54, 109

Conread position: 50-370
Cow position: chrX:878569-878246 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 63, 22

Conread position: 50-370
Cow position: chrX:4044048-4043733 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 102

Conread position: 50-370
Cow position: chrX:6690445-6690126 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 61

Conread position: 50-370
Cow position: chrX:7695562-7695882 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 148, 51

Conread position: 50-370
Cow position: chrX:9635378-9635057 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 103

Conread position: 50-370
Cow position: chrX:23091684-23092005 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 103

Conread position: 50-370
Cow position: chrX:31294741-31294438 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 238
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 139, 15

Conread position: 50-370
Cow position: chrX:33493577-33493910 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 54, 107

Conread position: 50-370
Cow position: chrX:35542694-35543021 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 54, 105

Conread position: 50-370
Cow position: chrX:40557873-40557545 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 142, 53

Conread position: 50-372
Cow position: chrX:18695117-18694794 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 84

Conread position: 50-372
Cow position: chrX:29542416-29542091 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 64, 103

Conread position: 50-373
Cow position: chrX:34532331-34532658 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 180, 61

Conread position: 50-373
Cow position: chrX:37232212-37232544 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 107

Conread position: 50-373
Cow position: chrX:42171497-42171158 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 96

Conread position: 50-374
Cow position: chrX:14884159-14883817 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 107

Conread position: 50-374
Cow position: chrX:15814900-15815222 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 235
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 241, 49

Conread position: 50-374
Cow position: chrX:32623385-32623709 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 61, 77

Conread position: 50-374
Cow position: chrX:33855430-33855082 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 54, 104

Conread position: 50-374
Cow position: chrX:42381297-42380974 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 61, 82

Conread position: 50-380
Cow position: chrX:1176180-1175846 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 56, 105

Conread position: 50-380
Cow position: chrX:6544059-6544398 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 59, 103

Conread position: 50-380
Cow position: chrX:27772157-27771824 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 49, 25

Conread position: 50-380
Cow position: chrX:34554531-34554867 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 97, 114

Conread position: 50-394
Cow position: chrX:37489533-37489877 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 145

Conread position: 50-394
Cow position: chrX:37836390-37836735 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 50, 153

Conread position: 50-396
Cow position: chrX:42499226-42498899 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 190, 74

Conread position: 50-399
Cow position: chrX:17794788-17795147 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 246
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 54, 92

Conread position: 50-400
Cow position: chrX:6413849-6414206 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 229
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 154

Conread position: 50-400
Cow position: chrX:31729258-31729605 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 15, 52

Conread position: 50-406
Cow position: chrX:17631000-17630626 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 256
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 100

Conread position: 50-424
Cow position: chrX:1616245-1615845 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 107

Conread position: 50-425
Cow position: chrX:37119402-37119789 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 43

Conread position: 50-425
Cow position: chrX:43780050-43779651 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 216

Conread position: 50-430
Cow position: chrX:20151653-20152067 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 222

Conread position: 50-434
Cow position: chrX:7646063-7646459 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 97

Conread position: 50-435
Cow position: chrX:1499472-1499878 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 148

Conread position: 50-435
Cow position: chrX:14973932-14973533 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 286
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 30, 53

Conread position: 50-435
Cow position: chrX:35413435-35413818 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 75

Conread position: 50-435
Cow position: chrX:39938720-39938314 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 126

Conread position: 50-438
Cow position: chrX:917569-917172 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 111

Conread position: 50-438
Cow position: chrX:1503141-1503534 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 279
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 105

Conread position: 50-438
Cow position: chrX:2206741-2206363 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 257
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 141, 75

Conread position: 50-438
Cow position: chrX:4750498-4750111 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 276
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 62, 29

Conread position: 50-438
Cow position: chrX:11073386-11072993 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 95

Conread position: 50-438
Cow position: chrX:17662794-17662394 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 107

Conread position: 50-438
Cow position: chrX:20752062-20752433 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 72

Conread position: 50-438
Cow position: chrX:22624284-22624687 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 286
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 58, 25

Conread position: 50-438
Cow position: chrX:31443019-31442612 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 141

Conread position: 50-438
Cow position: chrX:39558544-39558156 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 84

Conread position: 50-438
Cow position: chrX:42994417-42994823 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 37

Conread position: 50-443
Cow position: chrX:6234646-6234252 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 149

Conread position: 50-445
Cow position: chrX:36283148-36283574 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 296
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 48, 159

Conread position: 50-447
Cow position: chrX:9425939-9425526 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 277
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 58, 107

Conread position: 50-450
Cow position: chrX:6488389-6488804 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 58

Conread position: 50-453
Cow position: chrX:42585266-42584884 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 268
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 64, 36

Conread position: 50-466
Cow position: chrX:8925508-8925932 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 99

Conread position: 50-467
Cow position: chrX:11856232-11856659 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 14

Conread position: 50-469
Cow position: chrX:40035642-40035207 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 297
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 54, 106

Conread position: 50-469
Cow position: chrX:41403775-41404200 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 276
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 159

Conread position: 50-469
Cow position: chrX:41410323-41410748 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 276
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 159

Conread position: 50-475
Cow position: chrX:5638367-5637919 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 112

Conread position: 50-475
Cow position: chrX:27174798-27175240 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 294
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 53, 153

Conread position: 50-476
Cow position: chrX:27432116-27431675 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 299
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 54, 108

Conread position: 50-478
Cow position: chrX:36355925-36356347 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 296
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 101, 37

Conread position: 50-479
Cow position: chrX:11655891-11656322 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 110

Conread position: 50-480
Cow position: chrX:7178711-7179139 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 286
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 22

Conread position: 50-487
Cow position: chrX:23497862-23497421 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 84

Conread position: 50-493
Cow position: chrX:12980028-12979577 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 307
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 50, 107

Conread position: 50-497
Cow position: chrX:35288463-35288914 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 304
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 71

Conread position: 50-497
Cow position: chrX:42492712-42492259 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 50-498
Cow position: chrX:34411643-34412111 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 317
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 103

Conread position: 50-501
Cow position: chrX:30963069-30962609 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 307
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 62, 151

Conread position: 50-505
Cow position: chrX:38963909-38964392 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 79

Conread position: 50-506
Cow position: chrX:3579747-3580216 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 309
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 58, 154

Conread position: 50-506
Cow position: chrX:7277722-7278186 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 103

Conread position: 50-507
Cow position: chrX:15545697-15546152 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 310
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 83

Conread position: 50-508
Cow position: chrX:46587620-46588093 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 310
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 356

Conread position: 50-509
Cow position: chrX:17231537-17232010 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 308
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 76

Conread position: 50-511
Cow position: chrX:29120859-29121321 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 59

Conread position: 50-517
Cow position: chrX:20887842-20887355 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 325
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 61, 38

Conread position: 50-531
Cow position: chrX:42247381-42246885 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 121

Conread position: 51-366
Cow position: chrX:29602029-29601698 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 80

Conread position: 51-435
Cow position: chrX:19930457-19930847 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 278
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 8, 104

Conread position: 51-436
Cow position: chrX:35224103-35224501 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 279
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 28

Conread position: 52-319
Cow position: chrX:48652922-48652644 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 164

Conread position: 52-362
Cow position: chrX:16416310-16416625 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 130

Conread position: 52-366
Cow position: chrX:44961552-44961881 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 81

Conread position: 52-438
Cow position: chrX:11939122-11938726 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 101

Conread position: 52-485
Cow position: chrX:4269262-4268820 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 298
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 55, 178

Conread position: 53-158
Cow position: chrX:25283340-25283234 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 53-164
Cow position: chrX:29049775-29049884 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 53-197
Cow position: chrX:7382129-7382289 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 53-239
Cow position: chrX:7513320-7513506 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 100

Conread position: 53-280
Cow position: chrX:38439280-38439518 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 104

Conread position: 53-295
Cow position: chrX:9855106-9855350 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 55, 146

Conread position: 53-295
Cow position: chrX:9953947-9954191 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 146

Conread position: 53-304
Cow position: chrX:42855214-42855469 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 151

Conread position: 53-318
Cow position: chrX:11589783-11589512 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 151

Conread position: 53-319
Cow position: chrX:47484466-47484187 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 52, 156

Conread position: 53-320
Cow position: chrX:48010400-48010682 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 53-323
Cow position: chrX:16996312-16996573 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 64, 122

Conread position: 53-326
Cow position: chrX:12309584-12309302 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 94

Conread position: 53-326
Cow position: chrX:46771165-46770879 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 161

Conread position: 53-327
Cow position: chrX:16762578-16762856 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 102, 45

Conread position: 53-341
Cow position: chrX:37843526-37843818 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 59, 147

Conread position: 53-351
Cow position: chrX:26625871-26625556 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 107

Conread position: 53-362
Cow position: chrX:13382131-13382451 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 254

Conread position: 53-362
Cow position: chrX:34502724-34503046 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 100

Conread position: 53-366
Cow position: chrX:19690023-19690345 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 55, 152

Conread position: 53-366
Cow position: chrX:27394208-27393896 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 58

Conread position: 53-366
Cow position: chrX:38227284-38226980 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 98, 54

Conread position: 53-366
Cow position: chrX:46532704-46532365 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 53, 92

Conread position: 53-369
Cow position: chrX:38853002-38853330 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 102

Conread position: 53-370
Cow position: chrX:5017602-5017288 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 58

Conread position: 53-370
Cow position: chrX:9201352-9201682 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 104

Conread position: 53-372
Cow position: chrX:4768556-4768868 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 138, 48

Conread position: 53-374
Cow position: chrX:25035582-25035244 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 230
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 188

Conread position: 53-439
Cow position: chrX:37574662-37575044 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 72

Conread position: 53-459
Cow position: chrX:22074606-22075027 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 297
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 51, 100

Conread position: 53-468
Cow position: chrX:41526718-41526288 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 284
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 102

Conread position: 53-476
Cow position: chrX:7721790-7722239 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 105

Conread position: 53-521
Cow position: chrX:27705395-27705873 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 50

Conread position: 54-189
Cow position: chrX:46672799-46672659 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 54-190
Cow position: chrX:6639932-6640076 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 54-235
Cow position: chrX:32020315-32020128 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 51, 181

Conread position: 54-291
Cow position: chrX:16790031-16789808 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 205, 109

Conread position: 54-294
Cow position: chrX:23970195-23970432 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 181, 95

Conread position: 54-299
Cow position: chrX:18195748-18195978 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 63

Conread position: 54-317
Cow position: chrX:7718661-7718928 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 54, 92

Conread position: 54-326
Cow position: chrX:42507840-42507564 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 148

Conread position: 54-361
Cow position: chrX:7497050-7497364 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 58, 99

Conread position: 54-366
Cow position: chrX:11717976-11717653 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 109

Conread position: 54-370
Cow position: chrX:619201-618875 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 103

Conread position: 54-372
Cow position: chrX:47481606-47481932 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 39, 151

Conread position: 54-374
Cow position: chrX:23514211-23513883 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 10

Conread position: 54-380
Cow position: chrX:14599336-14599676 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 57, 105

Conread position: 54-409
Cow position: chrX:43049151-43049492 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 52, 153

Conread position: 54-438
Cow position: chrX:41122878-41123272 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 49

Conread position: 54-438
Cow position: chrX:45430210-45429804 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 276
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 100

Conread position: 54-485
Cow position: chrX:27446495-27446935 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 301
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 189

Conread position: 54-510
Cow position: chrX:45501955-45502424 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 317
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 50, 103

Conread position: 55-192
Cow position: chrX:37540932-37541073 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 55-279
Cow position: chrX:45874806-45875034 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 176

Conread position: 55-283
Cow position: chrX:12115847-12116087 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 154

Conread position: 55-293
Cow position: chrX:40116229-40116465 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 100

Conread position: 55-301
Cow position: chrX:21672359-21672613 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 53, 200

Conread position: 55-320
Cow position: chrX:31260822-31260541 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 103

Conread position: 55-326
Cow position: chrX:10866060-10865791 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 192

Conread position: 55-326
Cow position: chrX:20709879-20710158 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 102

Conread position: 55-326
Cow position: chrX:23583366-23583645 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 133

Conread position: 55-333
Cow position: chrX:14900914-14900642 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 46, 102

Conread position: 55-335
Cow position: chrX:8991695-8991978 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 71, 191

Conread position: 55-350
Cow position: chrX:38936508-38936814 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 50, 107

Conread position: 55-361
Cow position: chrX:48243644-48243352 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 143, 36

Conread position: 55-435
Cow position: chrX:42011087-42011485 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 271
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 51, 112

Conread position: 55-438
Cow position: chrX:10302146-10302544 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 261
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 126

Conread position: 55-438
Cow position: chrX:10959593-10959189 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 33, 126

Conread position: 55-438
Cow position: chrX:39546166-39545784 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 255
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 70

Conread position: 55-451
Cow position: chrX:20376775-20377183 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 255
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 150

Conread position: 55-478
Cow position: chrX:45110463-45110898 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 283
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 91

Conread position: 55-487
Cow position: chrX:754766-755219 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 300
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 56, 192

Conread position: 55-502
Cow position: chrX:2300741-2301198 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 293
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 139, 69

Conread position: 56-241
Cow position: chrX:28013631-28013447 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 138, 53

Conread position: 56-256
Cow position: chrX:11410218-11410021 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 135

Conread position: 57-305
Cow position: chrX:48035238-48035488 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 7

Conread position: 57-367
Cow position: chrX:34565102-34565415 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 42

Conread position: 58-215
Cow position: chrX:48684412-48684253 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 58-287
Cow position: chrX:3489074-3488844 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 140, 58

Conread position: 58-287
Cow position: chrX:28836091-28835858 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 91

Conread position: 58-297
Cow position: chrX:40567410-40567654 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 142

Conread position: 58-319
Cow position: chrX:47873530-47873259 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 18

Conread position: 58-326
Cow position: chrX:31489322-31489604 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 152

Conread position: 58-326
Cow position: chrX:40826936-40826667 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 83, 30

Conread position: 58-326
Cow position: chrX:44657154-44656873 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 221

Conread position: 58-328
Cow position: chrX:24105437-24105709 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 45, 142

Conread position: 58-357
Cow position: chrX:11082803-11082501 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 92

Conread position: 58-361
Cow position: chrX:28111317-28111634 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 95

Conread position: 58-362
Cow position: chrX:7571717-7572032 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 82

Conread position: 58-366
Cow position: chrX:23785464-23785777 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 50, 145

Conread position: 58-370
Cow position: chrX:31311836-31312163 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 99

Conread position: 58-374
Cow position: chrX:43730404-43730086 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 74

Conread position: 58-394
Cow position: chrX:13868504-13868860 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 46, 153

Conread position: 58-403
Cow position: chrX:31252228-31252573 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 40, 98

Conread position: 58-435
Cow position: chrX:4826017-4825624 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 277
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 96

Conread position: 58-493
Cow position: chrX:31436293-31436738 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 88

Conread position: 59-293
Cow position: chrX:10306482-10306727 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 154

Conread position: 59-295
Cow position: chrX:28845657-28845885 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 132, 33

Conread position: 59-326
Cow position: chrX:40809498-40809777 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 146

Conread position: 59-370
Cow position: chrX:42235722-42235390 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 43, 111

Conread position: 59-371
Cow position: chrX:7161883-7162191 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 180, 12

Conread position: 59-378
Cow position: chrX:9416881-9416542 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 54, 94

Conread position: 59-406
Cow position: chrX:20801591-20801938 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 68

Conread position: 64-205
Cow position: chrX:4123652-4123800 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 141

Conread position: 64-239
Cow position: chrX:2383305-2383485 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 87

Conread position: 64-254
Cow position: chrX:31256684-31256877 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 64

Conread position: 64-283
Cow position: chrX:47379650-47379427 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 89, 39

Conread position: 64-284
Cow position: chrX:45414483-45414263 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 90

Conread position: 64-305
Cow position: chrX:47046703-47046447 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 152

Conread position: 64-360
Cow position: chrX:11633495-11633806 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 64-366
Cow position: chrX:45845912-45846231 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 93

Conread position: 64-369
Cow position: chrX:36067836-36068148 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 44, 83

Conread position: 64-370
Cow position: chrX:9252361-9252029 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 32

Conread position: 64-393
Cow position: chrX:28878342-28878018 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 127, 41

Conread position: 64-469
Cow position: chrX:46073004-46072573 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 74

Conread position: 64-539
Cow position: chrX:20340074-20339590 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 34

Conread position: 65-246
Cow position: chrX:45759215-45759395 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 132, 53

Conread position: 65-319
Cow position: chrX:45993036-45993305 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 82

Conread position: 65-370
Cow position: chrX:13177647-13177342 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 39, 85

Conread position: 65-500
Cow position: chrX:32820847-32821290 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 11

Conread position: 66-253
Cow position: chrX:7336645-7336836 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 94

Conread position: 66-276
Cow position: chrX:37048761-37048548 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 93

Conread position: 66-435
Cow position: chrX:30543472-30543084 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 93

Conread position: 66-478
Cow position: chrX:25713612-25714041 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 284
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 22, 93

Conread position: 68-316
Cow position: chrX:13785537-13785286 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 123, 37

Conread position: 69-323
Cow position: chrX:36060973-36061241 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 140

Conread position: 69-443
Cow position: chrX:16514443-16514062 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 255
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 37, 86

Conread position: 70-373
Cow position: chrX:47186498-47186190 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 133

Conread position: 72-287
Cow position: chrX:29563546-29563325 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 85

Conread position: 72-362
Cow position: chrX:169701-169420 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 187, 42

Conread position: 72-537
Cow position: chrX:27145447-27145906 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 316
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 5, 84

Conread position: 74-362
Cow position: chrX:22387421-22387124 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 228
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 133

Conread position: 74-504
Cow position: chrX:35885903-35885453 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 295
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 131

Conread position: 75-326
Cow position: chrX:46433310-46433575 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 24, 183

Conread position: 76-248
Cow position: chrX:37955666-37955836 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 76-370
Cow position: chrX:4398954-4399253 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 83

Conread position: 77-326
Cow position: chrX:22921143-22921405 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 132

Conread position: 78-190
Cow position: chrX:41271377-41271261 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 78-525
Cow position: chrX:30133498-30133034 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 311
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 25, 55

Conread position: 79-279
Cow position: chrX:14003813-14003610 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 65

Conread position: 80-366
Cow position: chrX:41068560-41068855 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 53

Conread position: 83-358
Cow position: chrX:41992206-41991930 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 42, 20

Conread position: 85-319
Cow position: chrX:45875239-45875469 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 23

Conread position: 85-326
Cow position: chrX:22454252-22454014 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 7, 53

Conread position: 88-436
Cow position: chrX:25388388-25388047 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 223
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 61

Conread position: 89-366
Cow position: chrX:45976765-45977057 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 6, 115

Conread position: 90-393
Cow position: chrX:27227966-27228284 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 21, 117

Conread position: 92-279
Cow position: chrX:35969238-35969050 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 143

Conread position: 97-284
Cow position: chrX:32215051-32215239 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 51

Conread position: 97-302
Cow position: chrX:18204609-18204407 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 54, 103

Conread position: 98-362
Cow position: chrX:11085202-11084938 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 93, 101

Conread position: 98-435
Cow position: chrX:30421073-30420743 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 228
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 191, 10

Conread position: 103-323
Cow position: chrX:27946200-27945973 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 155

Conread position: 103-366
Cow position: chrX:29680400-29680131 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 46

Conread position: 103-437
Cow position: chrX:41870933-41871283 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 48, 35

Conread position: 103-438
Cow position: chrX:19878910-19879243 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 92, 21

Conread position: 104-324
Cow position: chrX:27685108-27685330 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 87, 95

Conread position: 104-326
Cow position: chrX:29723602-29723824 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 87, 95

Conread position: 104-349
Cow position: chrX:21566263-21566520 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 96

Conread position: 106-266
Cow position: chrX:27269833-27269989 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 91, 45

Conread position: 106-279
Cow position: chrX:31987004-31986827 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 104

Conread position: 106-374
Cow position: chrX:7710680-7710401 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 143

Conread position: 107-366
Cow position: chrX:42873256-42873515 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 39, 34

Conread position: 107-373
Cow position: chrX:23561740-23561995 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 151, 62

Conread position: 108-327
Cow position: chrX:41027022-41027244 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 86, 43

Conread position: 108-370
Cow position: chrX:616397-616125 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 83, 43

Conread position: 108-394
Cow position: chrX:9365809-9365517 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 8

Conread position: 108-438
Cow position: chrX:35822207-35822558 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 231
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 124, 322

Conread position: 110-441
Cow position: chrX:20584190-20584542 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 16, 42

Conread position: 112-374
Cow position: chrX:48385491-48385229 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 89

Conread position: 112-394
Cow position: chrX:40685462-40685169 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 80, 51

Conread position: 114-287
Cow position: chrX:36723220-36723045 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 114-326
Cow position: chrX:38728608-38728818 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 77, 84

Conread position: 117-373
Cow position: chrX:19003174-19003415 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 75, 34

Conread position: 121-326
Cow position: chrX:40320283-40320490 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 96

Conread position: 125-371
Cow position: chrX:34315407-34315656 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 118, 26

Conread position: 125-452
Cow position: chrX:5679684-5679360 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 66, 74

Conread position: 132-297
Cow position: chrX:32747572-32747735 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 67

Conread position: 132-362
Cow position: chrX:29194123-29194356 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 60, 19

Conread position: 132-362
Cow position: chrX:38654541-38654315 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 59, 19

Conread position: 140-305
Cow position: chrX:35848458-35848627 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 57

Conread position: 144-326
Cow position: chrX:1572237-1572055 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 90

Conread position: 146-326
Cow position: chrX:20168460-20168642 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 52

Conread position: 146-374
Cow position: chrX:23113177-23113423 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 56

Conread position: 149-350
Cow position: chrX:40680516-40680728 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 150-314
Cow position: chrX:20790827-20790985 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 51

Conread position: 150-405
Cow position: chrX:10516162-10516421 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 101, 37

Conread position: 152-270
Cow position: chrX:25283106-25282988 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 47

Conread position: 152-326
Cow position: chrX:29549639-29549465 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 39, 52

Conread position: 152-534
Cow position: chrX:12095865-12095472 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 254
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 47

Conread position: 153-326
Cow position: chrX:37129178-37129353 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 46

Conread position: 153-362
Cow position: chrX:29050156-29050373 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 48

Conread position: 154-326
Cow position: chrX:45099035-45099212 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 154-357
Cow position: chrX:16348658-16348457 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 138

Conread position: 154-362
Cow position: chrX:31515079-31515300 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 44, 51

Conread position: 154-416
Cow position: chrX:42855365-42855638 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 85, 45

Conread position: 155-326
Cow position: chrX:21327817-21327997 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 156-431
Cow position: chrX:20882025-20881741 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 52

Conread position: 156-438
Cow position: chrX:23940116-23939847 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 157-366
Cow position: chrX:36514981-36514762 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 44

Conread position: 158-362
Cow position: chrX:23562549-23562758 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 34, 43

Conread position: 164-370
Cow position: chrX:39220000-39220213 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 95, 80

Conread position: 166-400
Cow position: chrX:4515606-4515856 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 175-366
Cow position: chrX:19097291-19097089 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 59

Conread position: 182-370
Cow position: chrX:32978137-32977952 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 79, 17

Conread position: 199-376
Cow position: chrX:19943281-19943095 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 199-378
Cow position: chrX:22393030-22392843 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 170

Conread position: 204-370
Cow position: chrX:29553246-29553419 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 14

Conread position: 207-366
Cow position: chrX:23188813-23188654 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 37

Conread position: 207-438
Cow position: chrX:22284673-22284910 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 36

Conread position: 208-518
Cow position: chrX:17956660-17956980 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 52, 37

Conread position: 212-366
Cow position: chrX:23498709-23498550 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 39

Conread position: 224-444
Cow position: chrX:17966324-17966557 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 17

Conread position: 235-374
Cow position: chrX:29733600-29733454 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 10

Conread position: 238-500
Cow position: chrX:35278324-35278598 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 12

Conread position: 240-438
Cow position: chrX:24054667-24054888 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 241-436
Cow position: chrX:4466964-4467176 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 246-438
Cow position: chrX:35390737-35390536 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 127

Conread position: 267-438
Cow position: chrX:37048209-37048037 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 30

Conread position: 271-438
Cow position: chrX:27666245-27666078 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 26

Conread position: 273-444
Cow position: chrX:4942228-4942046 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 279-482
Cow position: chrX:40336979-40337186 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 51, 17

Conread position: 369-487
Cow position: chrX:31323557-31323675 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.