Cow genome map

Conread name: Ss1.1-rfhi4001b_p15.5

Conread position: 1-100
Cow position: chr11:15373347-15373446 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 24

Conread position: 1-107
Cow position: chr11:19890592-19890697 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 27

Conread position: 1-115
Cow position: chr11:3797119-3797233 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 24

Conread position: 1-117
Cow position: chr11:47662434-47662548 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 25

Conread position: 1-119
Cow position: chr11:7683541-7683657 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 25

Conread position: 1-136
Cow position: chr11:27326194-27326329 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-158
Cow position: chr11:32218290-32218131 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 25

Conread position: 1-158
Cow position: chr11:45277446-45277290 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 1-161
Cow position: chr11:10545699-10545859 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 37, 25

Conread position: 1-161
Cow position: chr11:15285908-15285748 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 27

Conread position: 1-162
Cow position: chr11:18140951-18141109 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 120, 25

Conread position: 1-162
Cow position: chr11:33001709-33001867 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 23

Conread position: 1-162
Cow position: chr11:49800987-49801148 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 24

Conread position: 1-163
Cow position: chr11:12528886-12528734 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 41, 25

Conread position: 1-163
Cow position: chr11:29608461-29608299 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 27

Conread position: 1-163
Cow position: chr11:37278489-37278328 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 1-163
Cow position: chr11:81337263-81337101 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 25

Conread position: 1-164
Cow position: chr11:49074584-49074421 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 25

Conread position: 1-165
Cow position: chr11:2911111-2910951 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 25

Conread position: 1-165
Cow position: chr11:13942520-13942683 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 1-165
Cow position: chr11:32198650-32198807 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 1-171
Cow position: chr11:58022902-58022739 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 31

Conread position: 1-179
Cow position: chr11:78480504-78480684 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 27

Conread position: 1-180
Cow position: chr11:84774827-84774996 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 159, 25

Conread position: 1-188
Cow position: chr11:18526183-18525994 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 25

Conread position: 1-188
Cow position: chr11:72314255-72314443 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 24

Conread position: 1-190
Cow position: chr11:19487766-19487581 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 25

Conread position: 1-190
Cow position: chr11:36986671-36986862 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 24

Conread position: 1-193
Cow position: chr11:5197368-5197176 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 27

Conread position: 1-193
Cow position: chr11:31437289-31437095 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 25

Conread position: 1-193
Cow position: chr11:53925471-53925663 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 24

Conread position: 1-193
Cow position: chr11:64087743-64087933 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 24

Conread position: 1-194
Cow position: chr11:5418554-5418362 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 173, 27

Conread position: 1-194
Cow position: chr11:6639221-6639410 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 137, 25

Conread position: 1-194
Cow position: chr11:10294307-10294491 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 25

Conread position: 1-194
Cow position: chr11:17968866-17968677 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 27

Conread position: 1-194
Cow position: chr11:21856669-21856864 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 24

Conread position: 1-194
Cow position: chr11:62750040-62749848 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 168, 27

Conread position: 1-194
Cow position: chr11:71705693-71705499 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 25

Conread position: 1-200
Cow position: chr11:55117182-55117388 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 37, 24

Conread position: 1-202
Cow position: chr11:54134538-54134342 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 27

Conread position: 1-204
Cow position: chr11:3303546-3303743 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 24

Conread position: 1-206
Cow position: chr11:22103472-22103668 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 174, 25

Conread position: 1-207
Cow position: chr11:3769580-3769379 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 25

Conread position: 1-208
Cow position: chr11:1849454-1849250 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 25

Conread position: 1-208
Cow position: chr11:32749817-32750028 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 24

Conread position: 1-208
Cow position: chr11:50197735-50197522 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 25

Conread position: 1-208
Cow position: chr11:64334567-64334771 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 24

Conread position: 1-209
Cow position: chr11:55347972-55348181 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 24

Conread position: 1-210
Cow position: chr11:25386780-25386980 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 24

Conread position: 1-210
Cow position: chr11:35881616-35881826 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 122

Conread position: 1-210
Cow position: chr11:62376727-62376520 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 171, 27

Conread position: 1-210
Cow position: chr11:64043958-64044157 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 25

Conread position: 1-210
Cow position: chr11:80820289-80820083 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 41, 27

Conread position: 1-211
Cow position: chr11:36899576-36899366 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 28

Conread position: 1-211
Cow position: chr11:40250891-40250684 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 151, 27

Conread position: 1-213
Cow position: chr11:62151172-62150967 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 25

Conread position: 1-214
Cow position: chr11:64090376-64090164 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 7

Conread position: 1-214
Cow position: chr11:83357102-83357312 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 25

Conread position: 1-215
Cow position: chr11:70609497-70609707 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 27

Conread position: 1-216
Cow position: chr11:70838593-70838371 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 27

Conread position: 1-217
Cow position: chr11:1071384-1071170 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 27

Conread position: 1-217
Cow position: chr11:8212485-8212701 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 24

Conread position: 1-217
Cow position: chr11:10095052-10095268 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 25

Conread position: 1-217
Cow position: chr11:10875732-10875949 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 24

Conread position: 1-217
Cow position: chr11:17860444-17860231 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 43, 25

Conread position: 1-217
Cow position: chr11:23232803-23232593 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 15

Conread position: 1-217
Cow position: chr11:26551128-26551340 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 144
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 1-217
Cow position: chr11:28643791-28644007 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 24

Conread position: 1-217
Cow position: chr11:31413160-31413376 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 27

Conread position: 1-217
Cow position: chr11:35238538-35238757 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 24

Conread position: 1-217
Cow position: chr11:38638832-38639042 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 164, 25

Conread position: 1-217
Cow position: chr11:38843273-38843490 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 24

Conread position: 1-217
Cow position: chr11:42083193-42083395 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 171, 25

Conread position: 1-217
Cow position: chr11:42292126-42291910 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 42, 25

Conread position: 1-217
Cow position: chr11:46329209-46329420 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 146
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 24

Conread position: 1-217
Cow position: chr11:50111901-50112111 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 24

Conread position: 1-217
Cow position: chr11:56518603-56518386 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 25

Conread position: 1-217
Cow position: chr11:59902600-59902814 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 128, 25

Conread position: 1-217
Cow position: chr11:60302248-60302038 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 43, 27

Conread position: 1-217
Cow position: chr11:62979187-62979411 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 24

Conread position: 1-217
Cow position: chr11:64638816-64638606 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 27

Conread position: 1-217
Cow position: chr11:65857567-65857782 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 23

Conread position: 1-217
Cow position: chr11:80761670-80761456 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 25

Conread position: 1-218
Cow position: chr11:4412310-4412091 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 46, 25

Conread position: 1-218
Cow position: chr11:71868894-71868682 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 25

Conread position: 1-218
Cow position: chr11:73924849-73924638 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 24

Conread position: 1-218
Cow position: chr11:85723411-85723626 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 24

Conread position: 1-219
Cow position: chr11:86926211-86926003 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 10, 28

Conread position: 1-222
Cow position: chr11:18086628-18086407 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 25

Conread position: 1-224
Cow position: chr11:54216542-54216767 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 159, 25

Conread position: 1-225
Cow position: chr11:5481788-5481559 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 25

Conread position: 1-225
Cow position: chr11:32076432-32076204 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 25

Conread position: 1-225
Cow position: chr11:43593702-43593926 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 58, 24

Conread position: 1-225
Cow position: chr11:54178828-54178599 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 25

Conread position: 1-226
Cow position: chr11:866006-866235 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 27

Conread position: 1-226
Cow position: chr11:3719961-3720188 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 25

Conread position: 1-226
Cow position: chr11:5032067-5031839 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 171, 25

Conread position: 1-226
Cow position: chr11:7315417-7315192 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 38, 27

Conread position: 1-226
Cow position: chr11:25319760-25319988 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 24

Conread position: 1-226
Cow position: chr11:46451328-46451542 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 156, 25

Conread position: 1-226
Cow position: chr11:51756025-51756245 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 163, 115

Conread position: 1-226
Cow position: chr11:59702194-59702419 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 72, 27

Conread position: 1-226
Cow position: chr11:67345935-67345716 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 25

Conread position: 1-226
Cow position: chr11:73512710-73512502 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 25

Conread position: 1-228
Cow position: chr11:12353234-12353003 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 25

Conread position: 1-232
Cow position: chr11:21437338-21437568 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 25

Conread position: 1-234
Cow position: chr11:44255729-44255967 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 24

Conread position: 1-235
Cow position: chr11:17321371-17321603 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 171, 25

Conread position: 1-235
Cow position: chr11:25791983-25791746 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 43, 25

Conread position: 1-235
Cow position: chr11:40467414-40467174 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 27

Conread position: 1-236
Cow position: chr11:13190929-13191170 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 24

Conread position: 1-236
Cow position: chr11:47586638-47586404 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 27

Conread position: 1-236
Cow position: chr11:54856344-54856573 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-237
Cow position: chr11:3175089-3175327 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 159, 27

Conread position: 1-237
Cow position: chr11:30701430-30701668 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 24

Conread position: 1-237
Cow position: chr11:31138687-31138450 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 25

Conread position: 1-237
Cow position: chr11:33413943-33414183 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 24

Conread position: 1-237
Cow position: chr11:34615978-34616213 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 24

Conread position: 1-237
Cow position: chr11:41314955-41315195 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-237
Cow position: chr11:48672418-48672661 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 25

Conread position: 1-237
Cow position: chr11:51208126-51208363 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 24

Conread position: 1-238
Cow position: chr11:2772995-2773236 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr11:10800598-10800836 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 24

Conread position: 1-238
Cow position: chr11:18572513-18572748 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 24

Conread position: 1-238
Cow position: chr11:23773913-23774154 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr11:24145828-24146070 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr11:26483429-26483661 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 171, 27

Conread position: 1-238
Cow position: chr11:28348950-28348709 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr11:30000320-30000561 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr11:41025459-41025700 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr11:48885359-48885600 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr11:49505210-49505450 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr11:53778322-53778562 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 23

Conread position: 1-238
Cow position: chr11:55744183-55744418 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 24

Conread position: 1-238
Cow position: chr11:57760510-57760751 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr11:59872636-59872878 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 58, 27

Conread position: 1-238
Cow position: chr11:60778241-60778482 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr11:61876476-61876714 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 157
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 25

Conread position: 1-238
Cow position: chr11:68570962-68570719 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 25

Conread position: 1-238
Cow position: chr11:72050650-72050891 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr11:76114362-76114598 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 10, 27

Conread position: 1-241
Cow position: chr11:2351177-2351422 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 177

Conread position: 1-241
Cow position: chr11:8339695-8339458 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 25

Conread position: 1-241
Cow position: chr11:35684789-35684546 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 25

Conread position: 1-241
Cow position: chr11:43361091-43360833 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 25

Conread position: 1-241
Cow position: chr11:44637051-44636806 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 43, 25

Conread position: 1-241
Cow position: chr11:53130522-53130761 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 27

Conread position: 1-242
Cow position: chr11:27939196-27939433 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 25

Conread position: 1-248
Cow position: chr11:1485651-1485400 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 25

Conread position: 1-248
Cow position: chr11:37974635-37974882 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 24

Conread position: 1-248
Cow position: chr11:58588053-58588303 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 27

Conread position: 1-248
Cow position: chr11:65970164-65970416 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 24

Conread position: 1-248
Cow position: chr11:83196211-83196455 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 171, 18

Conread position: 1-249
Cow position: chr11:16910659-16910404 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 1-249
Cow position: chr11:17112917-17112675 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 37, 25

Conread position: 1-249
Cow position: chr11:41812202-41811956 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 25

Conread position: 1-249
Cow position: chr11:67746987-67747242 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 23

Conread position: 1-249
Cow position: chr11:81174600-81174847 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 169, 25

Conread position: 1-250
Cow position: chr11:4732048-4732299 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 24

Conread position: 1-250
Cow position: chr11:64029546-64029303 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 171, 25

Conread position: 1-250
Cow position: chr11:71846639-71846386 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 40, 27

Conread position: 1-250
Cow position: chr11:87155222-87155480 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 25

Conread position: 1-252
Cow position: chr11:4734888-4735145 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-252
Cow position: chr11:47846649-47846905 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-252
Cow position: chr11:77751056-77750809 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 171, 28

Conread position: 1-253
Cow position: chr11:951978-952229 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 27

Conread position: 1-253
Cow position: chr11:3704030-3704269 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 227, 25

Conread position: 1-253
Cow position: chr11:8564265-8564009 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 25

Conread position: 1-254
Cow position: chr11:61454825-61454566 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 38, 25

Conread position: 1-255
Cow position: chr11:40818935-40818673 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 27

Conread position: 1-255
Cow position: chr11:70484152-70483894 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 25

Conread position: 1-255
Cow position: chr11:81143851-81143587 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 12, 27

Conread position: 1-256
Cow position: chr11:36182398-36182647 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 24

Conread position: 1-257
Cow position: chr11:74929490-74929751 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 171, 27

Conread position: 1-258
Cow position: chr11:34412806-34413067 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 37, 23

Conread position: 1-258
Cow position: chr11:48271905-48272166 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 20

Conread position: 1-259
Cow position: chr11:16226415-16226667 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 24

Conread position: 1-260
Cow position: chr11:3833638-3833387 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 39, 25

Conread position: 1-262
Cow position: chr11:2422126-2422387 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-262
Cow position: chr11:13247409-13247147 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 173
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-262
Cow position: chr11:15372103-15372365 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 24

Conread position: 1-262
Cow position: chr11:15503811-15504074 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 17

Conread position: 1-262
Cow position: chr11:21472617-21472359 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-262
Cow position: chr11:34278741-34279003 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 173
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 21

Conread position: 1-262
Cow position: chr11:38021297-38021035 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 25

Conread position: 1-262
Cow position: chr11:41261827-41262089 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-262
Cow position: chr11:52895714-52895974 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 171
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-275
Cow position: chr11:27248202-27248472 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 178
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 27

Conread position: 1-277
Cow position: chr11:40891-41159 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 25

Conread position: 1-277
Cow position: chr11:43913932-43914196 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 27

Conread position: 1-277
Cow position: chr11:44031709-44031986 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 24

Conread position: 1-280
Cow position: chr11:6835237-6835518 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 25

Conread position: 1-280
Cow position: chr11:70382985-70382706 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 164, 25

Conread position: 1-283
Cow position: chr11:3780715-3780431 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 38, 25

Conread position: 1-283
Cow position: chr11:4323076-4323345 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 37, 23

Conread position: 1-283
Cow position: chr11:18588870-18588599 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 14

Conread position: 1-283
Cow position: chr11:42836253-42835970 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 25

Conread position: 1-283
Cow position: chr11:66733545-66733816 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 28

Conread position: 1-293
Cow position: chr11:2535348-2535643 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 191
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-293
Cow position: chr11:17078624-17078913 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-293
Cow position: chr11:24334421-24334710 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 192
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-293
Cow position: chr11:56827260-56827549 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-293
Cow position: chr11:84184440-84184729 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 192
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 2-119
Cow position: chr11:27907263-27907380 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 23

Conread position: 2-143
Cow position: chr11:19787856-19787996 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 23

Conread position: 2-162
Cow position: chr11:6046860-6046701 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 2-163
Cow position: chr11:18912974-18913134 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 2-164
Cow position: chr11:49056886-49057046 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 23

Conread position: 2-164
Cow position: chr11:65694126-65693966 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 2-175
Cow position: chr11:75286697-75286526 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 24

Conread position: 2-194
Cow position: chr11:32431847-32432040 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 24

Conread position: 2-201
Cow position: chr11:6620581-6620378 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 37, 24

Conread position: 2-209
Cow position: chr11:33294081-33293870 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 29

Conread position: 2-209
Cow position: chr11:74746480-74746690 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 36, 23

Conread position: 2-215
Cow position: chr11:36981278-36981488 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 26

Conread position: 2-217
Cow position: chr11:11991656-11991868 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 23

Conread position: 2-217
Cow position: chr11:35363206-35363421 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 170, 26

Conread position: 2-217
Cow position: chr11:37292567-37292783 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 23

Conread position: 2-217
Cow position: chr11:65430775-65430982 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 167, 27

Conread position: 2-217
Cow position: chr11:70303797-70304006 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 136, 24

Conread position: 2-218
Cow position: chr11:8988519-8988305 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 24

Conread position: 2-218
Cow position: chr11:44234068-44234276 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 25

Conread position: 2-218
Cow position: chr11:46748158-46747940 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 37, 24

Conread position: 2-226
Cow position: chr11:39115206-39115428 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 14

Conread position: 2-233
Cow position: chr11:32595177-32595410 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 23

Conread position: 2-236
Cow position: chr11:13205893-13205662 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 56, 24

Conread position: 2-236
Cow position: chr11:41239561-41239325 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 170, 24

Conread position: 2-236
Cow position: chr11:66897089-66896851 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 113, 24

Conread position: 2-238
Cow position: chr11:7248166-7247936 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 24

Conread position: 2-238
Cow position: chr11:37068593-37068369 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 56

Conread position: 2-241
Cow position: chr11:58990221-58990453 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 42, 24

Conread position: 2-241
Cow position: chr11:63065364-63065607 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 41, 23

Conread position: 2-249
Cow position: chr11:21894443-21894199 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 37, 24

Conread position: 2-249
Cow position: chr11:40458831-40459068 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 23

Conread position: 2-249
Cow position: chr11:77759049-77758802 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 22

Conread position: 2-254
Cow position: chr11:10076485-10076729 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 24

Conread position: 2-256
Cow position: chr11:80923625-80923360 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 24

Conread position: 2-258
Cow position: chr11:62019888-62019626 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 24

Conread position: 2-277
Cow position: chr11:3393499-3393228 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 21

Conread position: 2-283
Cow position: chr11:30720808-30721085 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 187
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 23

Conread position: 2-283
Cow position: chr11:33349991-33349714 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 27

Conread position: 3-177
Cow position: chr11:70619767-70619936 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 23

Conread position: 3-180
Cow position: chr11:69119011-69119188 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 36, 22

Conread position: 3-217
Cow position: chr11:37118196-37118412 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 23

Conread position: 3-217
Cow position: chr11:41809765-41809557 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 165, 23

Conread position: 3-217
Cow position: chr11:62490145-62490355 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 21

Conread position: 3-217
Cow position: chr11:63847563-63847771 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 3-225
Cow position: chr11:39162988-39163214 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 22

Conread position: 3-235
Cow position: chr11:12316375-12316138 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 55, 23

Conread position: 3-241
Cow position: chr11:34962774-34963014 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 143, 23

Conread position: 3-254
Cow position: chr11:70273015-70273267 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 159, 13

Conread position: 3-259
Cow position: chr11:30120951-30120697 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 23

Conread position: 4-165
Cow position: chr11:23251891-23251730 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 23

Conread position: 4-168
Cow position: chr11:70205764-70205917 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 4-184
Cow position: chr11:46592039-46592211 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 164, 24

Conread position: 4-193
Cow position: chr11:18389144-18388963 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 24

Conread position: 4-217
Cow position: chr11:6580526-6580740 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 21

Conread position: 4-217
Cow position: chr11:24601679-24601896 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 173

Conread position: 4-217
Cow position: chr11:47165424-47165217 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 168, 20

Conread position: 4-235
Cow position: chr11:49105770-49106001 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 23

Conread position: 4-235
Cow position: chr11:77705477-77705699 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 22

Conread position: 4-238
Cow position: chr11:32609704-32609949 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 23

Conread position: 4-240
Cow position: chr11:18698587-18698826 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 21

Conread position: 4-241
Cow position: chr11:31900761-31900996 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 21

Conread position: 4-250
Cow position: chr11:4384338-4384579 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 35, 22

Conread position: 4-250
Cow position: chr11:42016926-42016672 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 40, 22

Conread position: 4-254
Cow position: chr11:50153105-50152853 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 185, 24

Conread position: 5-116
Cow position: chr11:6091935-6091824 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 39, 21

Conread position: 5-158
Cow position: chr11:63166446-63166296 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 23

Conread position: 5-207
Cow position: chr11:11534188-11533989 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 169, 21

Conread position: 5-208
Cow position: chr11:44576023-44575822 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 23

Conread position: 5-210
Cow position: chr11:7924875-7924665 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 152, 21

Conread position: 5-214
Cow position: chr11:8525392-8525191 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 166, 23

Conread position: 5-217
Cow position: chr11:2788093-2788305 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 21

Conread position: 5-217
Cow position: chr11:10302475-10302267 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 21

Conread position: 5-217
Cow position: chr11:25165159-25165365 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 60, 21

Conread position: 5-217
Cow position: chr11:44642572-44642364 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 34, 23

Conread position: 5-217
Cow position: chr11:58614374-58614585 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 62, 21

Conread position: 5-222
Cow position: chr11:30191883-30192101 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 23

Conread position: 5-226
Cow position: chr11:48932869-48932650 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 167, 21

Conread position: 5-226
Cow position: chr11:62965840-62965617 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 23

Conread position: 5-235
Cow position: chr11:43524336-43524563 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 21

Conread position: 5-235
Cow position: chr11:57111594-57111363 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 143, 21

Conread position: 5-235
Cow position: chr11:83066209-83066438 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 23

Conread position: 5-241
Cow position: chr11:18484446-18484222 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 39, 26

Conread position: 5-241
Cow position: chr11:43646703-43646465 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 13

Conread position: 5-241
Cow position: chr11:53719659-53719893 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 167, 23

Conread position: 5-247
Cow position: chr11:8841027-8840790 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 37, 23

Conread position: 5-248
Cow position: chr11:9837383-9837142 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 11

Conread position: 5-248
Cow position: chr11:41986330-41986085 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 21

Conread position: 5-249
Cow position: chr11:70459288-70459519 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 21

Conread position: 5-249
Cow position: chr11:74316420-74316672 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 89, 23

Conread position: 5-250
Cow position: chr11:80530084-80530326 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 21

Conread position: 5-254
Cow position: chr11:13499728-13499978 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 20

Conread position: 5-254
Cow position: chr11:58103061-58102814 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 23

Conread position: 5-254
Cow position: chr11:68207122-68206882 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 167, 21

Conread position: 5-255
Cow position: chr11:29947213-29946968 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 21

Conread position: 5-259
Cow position: chr11:49148763-49149002 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 157, 21

Conread position: 5-267
Cow position: chr11:16251536-16251273 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 34, 21

Conread position: 5-275
Cow position: chr11:35579967-35580239 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 24

Conread position: 5-277
Cow position: chr11:20761559-20761828 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 167, 23

Conread position: 5-283
Cow position: chr11:80788197-80787920 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 24

Conread position: 6-106
Cow position: chr11:53147825-53147726 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 6-111
Cow position: chr11:33526791-33526895 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 20

Conread position: 6-163
Cow position: chr11:9234341-9234496 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 22

Conread position: 6-184
Cow position: chr11:31873283-31873459 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 20

Conread position: 6-188
Cow position: chr11:63920573-63920395 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 6-194
Cow position: chr11:37563184-37563363 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 22

Conread position: 6-207
Cow position: chr11:10620611-10620412 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 22

Conread position: 6-217
Cow position: chr11:19508011-19508218 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 22

Conread position: 6-217
Cow position: chr11:30934140-30934347 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 15

Conread position: 6-217
Cow position: chr11:38010099-38009888 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 113

Conread position: 6-217
Cow position: chr11:38193866-38194077 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 22

Conread position: 6-217
Cow position: chr11:67804465-67804676 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 22

Conread position: 6-217
Cow position: chr11:85189672-85189459 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 156

Conread position: 6-241
Cow position: chr11:21844418-21844185 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 166, 20

Conread position: 6-242
Cow position: chr11:85764665-85764889 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 105

Conread position: 6-246
Cow position: chr11:31352856-31352613 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 164, 22

Conread position: 6-248
Cow position: chr11:30110686-30110919 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 178, 20

Conread position: 6-250
Cow position: chr11:7589905-7590152 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 20

Conread position: 6-250
Cow position: chr11:55333622-55333869 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 12, 21

Conread position: 6-254
Cow position: chr11:9222013-9221765 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 12, 114

Conread position: 6-255
Cow position: chr11:48650509-48650759 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 160, 22

Conread position: 6-276
Cow position: chr11:23128821-23128560 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 166, 20

Conread position: 6-281
Cow position: chr11:50778084-50778360 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 22

Conread position: 6-283
Cow position: chr11:68910132-68909859 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 10

Conread position: 6-283
Cow position: chr11:77745539-77745265 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 20

Conread position: 7-188
Cow position: chr11:36309696-36309516 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 113

Conread position: 7-226
Cow position: chr11:37347191-37347414 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 37, 19

Conread position: 7-242
Cow position: chr11:4674735-4674494 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 19

Conread position: 8-142
Cow position: chr11:37547197-37547063 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 18

Conread position: 8-162
Cow position: chr11:40609004-40608852 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 18

Conread position: 8-162
Cow position: chr11:81922597-81922753 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 18

Conread position: 8-208
Cow position: chr11:60512502-60512701 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 152, 18

Conread position: 8-217
Cow position: chr11:18244225-18244015 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 20

Conread position: 8-217
Cow position: chr11:38235960-38236166 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 18

Conread position: 8-217
Cow position: chr11:54334051-54334256 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 36, 17

Conread position: 8-218
Cow position: chr11:64932579-64932376 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 164, 20

Conread position: 8-226
Cow position: chr11:48474425-48474638 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 31, 18

Conread position: 8-226
Cow position: chr11:84891035-84890815 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 109, 20

Conread position: 8-238
Cow position: chr11:17831511-17831274 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 18

Conread position: 8-241
Cow position: chr11:25646150-25645914 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 156
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 152, 18

Conread position: 8-247
Cow position: chr11:81300896-81300650 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 20

Conread position: 8-248
Cow position: chr11:77241097-77241327 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 164, 18

Conread position: 8-249
Cow position: chr11:6234162-6233923 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 32, 18

Conread position: 8-250
Cow position: chr11:65409441-65409197 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 34, 18

Conread position: 8-253
Cow position: chr11:2309594-2309833 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 18

Conread position: 8-255
Cow position: chr11:63518730-63518980 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 18

Conread position: 9-164
Cow position: chr11:49550360-49550208 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 20

Conread position: 9-170
Cow position: chr11:25808041-25807880 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 17

Conread position: 9-194
Cow position: chr11:16795434-16795252 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 19

Conread position: 9-194
Cow position: chr11:22978139-22977965 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 157, 19

Conread position: 9-194
Cow position: chr11:30879395-30879583 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 18

Conread position: 9-217
Cow position: chr11:46473968-46473758 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 20

Conread position: 9-218
Cow position: chr11:60470462-60470257 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 17

Conread position: 9-226
Cow position: chr11:4436050-4436261 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 31, 16

Conread position: 9-235
Cow position: chr11:67931777-67931547 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 17

Conread position: 9-238
Cow position: chr11:55761597-55761817 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 208, 19

Conread position: 9-241
Cow position: chr11:11752801-11752568 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 157, 17

Conread position: 9-258
Cow position: chr11:43897855-43898105 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 16

Conread position: 9-259
Cow position: chr11:56654266-56654518 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 125, 17

Conread position: 10-217
Cow position: chr11:65827013-65826819 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 16

Conread position: 10-235
Cow position: chr11:73354337-73354110 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 16

Conread position: 10-241
Cow position: chr11:41577286-41577064 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 162, 16

Conread position: 10-252
Cow position: chr11:45632046-45631801 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 16

Conread position: 10-255
Cow position: chr11:34112992-34113227 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 16

Conread position: 10-256
Cow position: chr11:23138342-23138093 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 88, 16

Conread position: 11-162
Cow position: chr11:17083578-17083430 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 15

Conread position: 11-162
Cow position: chr11:35282843-35282992 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 11-180
Cow position: chr11:75510513-75510345 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 15

Conread position: 11-210
Cow position: chr11:58600580-58600780 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 14

Conread position: 11-217
Cow position: chr11:67951241-67951042 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 11-224
Cow position: chr11:10127894-10127691 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 15

Conread position: 11-238
Cow position: chr11:26535495-26535723 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 95, 15

Conread position: 12-165
Cow position: chr11:80520688-80520842 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 14

Conread position: 12-177
Cow position: chr11:29014116-29014280 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 148, 14

Conread position: 12-209
Cow position: chr11:83043640-83043449 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 27, 16

Conread position: 12-224
Cow position: chr11:81614911-81614708 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 163, 14

Conread position: 12-232
Cow position: chr11:39057359-39057569 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 13

Conread position: 12-309
Cow position: chr11:21549216-21549499 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 10

Conread position: 13-165
Cow position: chr11:56751659-56751514 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 13-195
Cow position: chr11:12111746-12111566 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 13

Conread position: 13-214
Cow position: chr11:45646869-45646675 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 13-217
Cow position: chr11:77207770-77207969 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 13

Conread position: 13-218
Cow position: chr11:46746357-46746555 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 182, 13

Conread position: 13-221
Cow position: chr11:2281565-2281361 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 140, 13

Conread position: 13-232
Cow position: chr11:32377909-32378128 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 13

Conread position: 13-250
Cow position: chr11:30475721-30475961 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 124, 13

Conread position: 13-250
Cow position: chr11:75748157-75748392 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 159, 13

Conread position: 13-259
Cow position: chr11:1362759-1362509 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 13

Conread position: 14-165
Cow position: chr11:18891003-18891153 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 14-217
Cow position: chr11:35276023-35276223 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 30, 12

Conread position: 14-217
Cow position: chr11:51044214-51044008 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 12

Conread position: 14-217
Cow position: chr11:51688003-51687802 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 12

Conread position: 14-226
Cow position: chr11:71309806-71309593 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 25, 9

Conread position: 14-241
Cow position: chr11:48901355-48901131 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 12

Conread position: 15-157
Cow position: chr11:8428218-8428359 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 10

Conread position: 15-212
Cow position: chr11:35874257-35874074 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 160, 13

Conread position: 15-224
Cow position: chr11:81137945-81138156 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 11

Conread position: 15-249
Cow position: chr11:33341422-33341188 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 29, 11

Conread position: 15-249
Cow position: chr11:48697171-48697404 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 11

Conread position: 15-277
Cow position: chr11:6154136-6154390 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 202, 11

Conread position: 16-166
Cow position: chr11:39034179-39034321 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 9

Conread position: 16-178
Cow position: chr11:17036827-17036665 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 156, 13

Conread position: 16-210
Cow position: chr11:59156146-59155963 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 12

Conread position: 16-217
Cow position: chr11:377926-377721 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 23, 10

Conread position: 16-226
Cow position: chr11:17278937-17278731 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 141, 10

Conread position: 16-237
Cow position: chr11:10992004-10992226 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 10

Conread position: 16-247
Cow position: chr11:75355334-75355565 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 10

Conread position: 16-248
Cow position: chr11:27462660-27462435 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 10

Conread position: 16-257
Cow position: chr11:62155355-62155593 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 143, 10

Conread position: 17-165
Cow position: chr11:30354793-30354940 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 17-215
Cow position: chr11:18210623-18210425 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 9

Conread position: 17-217
Cow position: chr11:6400346-6400147 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 143, 9

Conread position: 17-217
Cow position: chr11:52381145-52380951 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 9

Conread position: 17-241
Cow position: chr11:79728948-79728720 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 11

Conread position: 17-260
Cow position: chr11:17227914-17227684 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 11

Conread position: 18-215
Cow position: chr11:51144444-51144636 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 8

Conread position: 18-217
Cow position: chr11:11232728-11232532 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 10

Conread position: 18-241
Cow position: chr11:38810626-38810397 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 18-256
Cow position: chr11:8105509-8105746 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 21, 8

Conread position: 19-226
Cow position: chr11:12555690-12555476 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 143, 7

Conread position: 20-208
Cow position: chr11:5227010-5226823 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 140, 6

Conread position: 20-217
Cow position: chr11:50951279-50951477 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 8

Conread position: 20-254
Cow position: chr11:30708232-30708467 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 142, 6

Conread position: 20-280
Cow position: chr11:53773400-53773665 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 223

Conread position: 20-283
Cow position: chr11:66041002-66041271 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 6

Conread position: 21-258
Cow position: chr11:29916266-29916498 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 90

Conread position: 23-226
Cow position: chr11:45872586-45872382 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 141, 11

Conread position: 25-194
Cow position: chr11:7415113-7414948 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 163, 75

Conread position: 25-217
Cow position: chr11:24937395-24937586 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 149, 0

Conread position: 25-217
Cow position: chr11:41983714-41983530 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 94

Conread position: 25-238
Cow position: chr11:30912259-30912049 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 143, 151

Conread position: 25-241
Cow position: chr11:34032463-34032252 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 141, 19

Conread position: 25-244
Cow position: chr11:84924363-84924142 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 72, 18

Conread position: 25-251
Cow position: chr11:45898323-45898093 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 43

Conread position: 25-254
Cow position: chr11:19247463-19247238 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 95

Conread position: 27-226
Cow position: chr11:62045133-62045331 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 99

Conread position: 27-235
Cow position: chr11:25336810-25337020 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 28

Conread position: 27-235
Cow position: chr11:36799561-36799358 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 145, 16

Conread position: 27-253
Cow position: chr11:71455522-71455754 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 17, 208

Conread position: 28-238
Cow position: chr11:17192546-17192335 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 13, 91

Conread position: 28-250
Cow position: chr11:63482690-63482466 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 91

Conread position: 28-275
Cow position: chr11:47544863-47545113 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 24, 208

Conread position: 28-281
Cow position: chr11:27746653-27746916 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 150

Conread position: 32-165
Cow position: chr11:51177242-51177376 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 34-238
Cow position: chr11:36647102-36647304 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 142

Conread position: 35-235
Cow position: chr11:42793232-42793029 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 134, 141

Conread position: 36-201
Cow position: chr11:16342497-16342333 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 157, 85

Conread position: 36-255
Cow position: chr11:33310714-33310935 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 68

Conread position: 37-241
Cow position: chr11:41426659-41426862 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 127, 86

Conread position: 37-250
Cow position: chr11:56728692-56728905 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 179, 138

Conread position: 38-217
Cow position: chr11:63516570-63516749 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 134, 122

Conread position: 38-248
Cow position: chr11:49152700-49152907 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 134, 59

Conread position: 38-267
Cow position: chr11:2050326-2050557 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 124, 80

Conread position: 38-277
Cow position: chr11:66188575-66188336 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 82

Conread position: 39-226
Cow position: chr11:81281692-81281882 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 78, 84

Conread position: 39-249
Cow position: chr11:3726033-3726245 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 125, 76

Conread position: 39-271
Cow position: chr11:35154080-35153846 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 180, 217

Conread position: 46-256
Cow position: chr11:47899031-47899248 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 126, 114

Conread position: 48-241
Cow position: chr11:62808892-62808699 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 124, 70

Conread position: 49-238
Cow position: chr11:57725071-57724876 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 57-249
Cow position: chr11:18341273-18341083 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 160, 110

Conread position: 57-277
Cow position: chr11:82940852-82940638 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 54

Conread position: 59-217
Cow position: chr11:32436096-32436254 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 140

Conread position: 59-226
Cow position: chr11:33348417-33348249 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 59

Conread position: 64-217
Cow position: chr11:19755429-19755584 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 142

Conread position: 69-241
Cow position: chr11:23586413-23586585 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 12

Conread position: 69-282
Cow position: chr11:17660872-17661084 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 50

Conread position: 70-225
Cow position: chr11:34145138-34144981 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 148, 102

Conread position: 82-254
Cow position: chr11:61958959-61958783 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 0

Show alignments to all cow chromosomes.