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Cow genome map

           
Conread name:
           
Ss1.1-rfhi4001b_p15.5
        

               
Conread position:
               
1-111
               

               
Cow position:
               
chr21:45971366-45971256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr21:30257912-30257778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr21:26241616-26241775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr21:47760569-47760729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr21:11877176-11877334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr21:426584-426745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr21:13300944-13301104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
157, 104
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr21:17282495-17282655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr21:38918007-38918166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr21:18713078-18713236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr21:22100078-22099911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr21:24130873-24131036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr21:8289849-8289675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr21:5153409-5153581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr21:37282101-37282274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr21:46777181-46777006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr21:20162327-20162507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr21:3782892-3783080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr21:13316175-13316360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr21:34254490-34254300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr21:18289453-18289644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr21:21170150-21169960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr21:30592506-30592323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
163, 22
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr21:33350534-33350727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr21:18935553-18935752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
171, 27
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr21:3585564-3585366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
171, 28
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr21:37479748-37479954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr21:5649698-5649904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr21:13303611-13303815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr21:38691982-38692184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
171, 43
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr21:43272062-43271851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr21:47649459-47649670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:2679344-2679557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:7716999-7716783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:42348886-42348673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:48251238-48251026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr21:42464052-42463832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr21:17410867-17410653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:4080146-4080363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:4189626-4189840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:5595453-5595661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:5636929-5636714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:6764910-6764692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:10967025-10967238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:13954303-13954522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:19196376-19196158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:19766646-19766860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:21216349-21216139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:22856011-22856224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:23150227-23150018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
161, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:23683342-23683552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:28993834-28993617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:30594960-30594738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:32297710-32297504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
163, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:32535768-32535979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:33209990-33210206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:34738390-34738614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:38900565-38900782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:43240650-43240871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:49700244-49700030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr21:17511568-17511783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr21:31662252-31662470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr21:32191962-32192180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr21:43236755-43236972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr21:20925714-20925501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
173, 25
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr21:28429241-28429448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr21:25344670-25344882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 25
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr21:395670-395884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
171, 14
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr21:150268-150492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr21:1196659-1196887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr21:1483281-1483506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr21:2495382-2495154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr21:17144940-17145168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr21:18718460-18718688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr21:27607571-27607343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr21:44671545-44671766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr21:81862-82095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr21:10727073-10727293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr21:13410031-13409808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr21:20160476-20160694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr21:21480387-21480167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr21:23984492-23984265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr21:27124336-27124110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr21:36297271-36297503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr21:40058598-40058821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
161, 25
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr21:42190375-42190159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr21:13111005-13110774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr21:24607177-24607406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr21:45473966-45473730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr21:4998693-4998461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
144, 27
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr21:34658826-34659059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr21:48459076-48458838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr21:24296971-24296738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr21:46912336-46912566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr21:2938821-2939062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr21:4092774-4093015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr21:11143728-11143489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr21:11706959-11706717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
163, 28
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr21:23322289-23322050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
158, 27
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr21:27863727-27863488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
172, 23
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr21:30655761-30656002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr21:33235590-33235831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr21:34074759-34075000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr21:41795602-41795361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr21:912176-911936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr21:12153925-12154164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr21:34391178-34390944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr21:39401392-39401625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
165, 25
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr21:39700284-39700039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr21:20262542-20262295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr21:41155654-41155899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr21:23821960-23822206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr21:36163171-36162923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr21:39888952-39888708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr21:40244226-40244480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr21:42384297-42384550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr21:28477417-28477668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
159, 25
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr21:9416034-9416292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr21:22718989-22718741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr21:23606466-23606716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr21:30231911-30231652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr21:42913954-42913701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr21:28734120-28733869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr21:393813-394065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr21:7564530-7564269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr21:16612421-16612672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr21:8985341-8985596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr21:48267-48529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr21:4957398-4957136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr21:20370487-20370749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr21:5021260-5021528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr21:12616931-12617192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr21:23192726-23192450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr21:39403746-39403473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
165, 29
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr21:28626033-28626301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr21:43357467-43357193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
164, 27
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr21:643129-643386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr21:16188006-16187745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
171, 18
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr21:20044978-20044699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
166, 15
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr21:24796246-24795969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr21:641376-641662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr21:42540428-42540147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr21:33729225-33729498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr21:40786462-40786746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr21:42905586-42905300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr21:33632657-33632368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr21:13632681-13633022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
2-162
               

               
Cow position:
               
chr21:4279425-4279585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
2-194
               

               
Cow position:
               
chr21:937842-938015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
167, 24
               

               
Conread position:
               
2-206
               

               
Cow position:
               
chr21:25764428-25764631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
170, 24
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr21:7132669-7132466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
170, 24
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr21:18781633-18781843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr21:10151588-10151793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
160, 24
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr21:34010597-34010394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr21:18783888-18783681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr21:41957381-41957172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr21:41974586-41974371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr21:40899129-40899346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr21:15584610-15584395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
215, 24
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr21:23535506-23535741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr21:37299258-37299488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr21:15445286-15445026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr21:15976433-15976682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr21:13048403-13048125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr21:13718065-13717854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr21:17416968-17416757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr21:24858105-24858317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr21:44826082-44825863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
169, 23
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr21:43300863-43300623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:17434527-17434274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:46263970-46264214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr21:33983016-33982745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
4-130
               

               
Cow position:
               
chr21:23293361-23293236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
4-162
               

               
Cow position:
               
chr21:17218821-17218666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 22
               

               
Conread position:
               
4-164
               

               
Cow position:
               
chr21:31278574-31278729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
4-165
               

               
Cow position:
               
chr21:28919831-28919670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
4-170
               

               
Cow position:
               
chr21:19436322-19436161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
4-177
               

               
Cow position:
               
chr21:16166838-16166669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr21:16789516-16789709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr21:17433460-17433271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr21:21223085-21223274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
162, 22
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr21:19258621-19258825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr21:3498293-3498506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr21:33419920-33419707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr21:48484646-48484416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
156, 22
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr21:47802465-47802217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr21:30990473-30990231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
168, 24
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr21:4399594-4399853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
5-153
               

               
Cow position:
               
chr21:8546409-8546268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr21:16909855-16910044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr21:28599567-28599758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr21:31159051-31159244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
5-210
               

               
Cow position:
               
chr21:27569362-27569168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
5-217
               

               
Cow position:
               
chr21:6051302-6051511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
5-217
               

               
Cow position:
               
chr21:19083804-19083591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 23
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr21:13727964-13727757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
5-234
               

               
Cow position:
               
chr21:9278168-9278405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
5-234
               

               
Cow position:
               
chr21:10854384-10854618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr21:24094948-24094722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr21:40133951-40134189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr21:24887805-24888039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
214, 21
               

               
Conread position:
               
5-242
               

               
Cow position:
               
chr21:41620915-41621156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr21:22860798-22861039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
163, 21
               

               
Conread position:
               
5-249
               

               
Cow position:
               
chr21:27743538-27743787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr21:8618070-8618324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr21:42414306-42414056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
135, 21
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr21:2927407-2927154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr21:31702160-31701905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr21:38120903-38121149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr21:9710908-9710644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr21:12961103-12960836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
164, 24
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr21:29484780-29485044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
167, 23
               

               
Conread position:
               
6-160
               

               
Cow position:
               
chr21:35899605-35899757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr21:14464374-14464531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
6-183
               

               
Cow position:
               
chr21:46132181-46132007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
6-211
               

               
Cow position:
               
chr21:18828512-18828309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
6-216
               

               
Cow position:
               
chr21:45355633-45355839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr21:34835626-34835430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr21:4276797-4276580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr21:25382804-25383030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr21:41579548-41579777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
154, 20
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr21:45330811-45330576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr21:24765081-24765320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
6-249
               

               
Cow position:
               
chr21:34739646-34739882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
211, 20
               

               
Conread position:
               
6-254
               

               
Cow position:
               
chr21:5137695-5137444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
6-255
               

               
Cow position:
               
chr21:24598456-24598700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr21:27614084-27614338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr21:29002365-29002106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr21:12801947-12801697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
163, 22
               

               
Conread position:
               
6-283
               

               
Cow position:
               
chr21:8549478-8549750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
7-164
               

               
Cow position:
               
chr21:18979047-18978896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
7-216
               

               
Cow position:
               
chr21:13395354-13395555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
178, 21
               

               
Conread position:
               
7-235
               

               
Cow position:
               
chr21:41597613-41597846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
7-252
               

               
Cow position:
               
chr21:5596943-5597193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
6, 20
               

               
Conread position:
               
8-136
               

               
Cow position:
               
chr21:25158688-25158817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
8-158
               

               
Cow position:
               
chr21:18568852-18568704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
8-162
               

               
Cow position:
               
chr21:28029196-28029350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
8-208
               

               
Cow position:
               
chr21:33263646-33263844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
8-211
               

               
Cow position:
               
chr21:5566788-5566998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr21:725093-724882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr21:9310842-9311049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr21:17936169-17936379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr21:27229996-27229790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr21:32237096-32237299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr21:36642706-36642911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
8-218
               

               
Cow position:
               
chr21:5392743-5392535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
164, 20
               

               
Conread position:
               
8-238
               

               
Cow position:
               
chr21:24222739-24222510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
8-238
               

               
Cow position:
               
chr21:27521526-27521304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
149, 18
               

               
Conread position:
               
8-241
               

               
Cow position:
               
chr21:46849324-46849096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
9-217
               

               
Cow position:
               
chr21:23672544-23672754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
123, 17
               

               
Conread position:
               
9-226
               

               
Cow position:
               
chr21:36795402-36795616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr21:31691277-31691513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr21:13897991-13898225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
161, 15
               

               
Conread position:
               
9-254
               

               
Cow position:
               
chr21:33997422-33997185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
9-259
               

               
Cow position:
               
chr21:42145716-42145963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
9-283
               

               
Cow position:
               
chr21:31676298-31676567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr21:13738372-13738602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
165, 16
               

               
Conread position:
               
10-254
               

               
Cow position:
               
chr21:23586677-23586924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
10-254
               

               
Cow position:
               
chr21:28881943-28882179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
10-255
               

               
Cow position:
               
chr21:10882235-10882485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
10-275
               

               
Cow position:
               
chr21:29069528-29069267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
11-250
               

               
Cow position:
               
chr21:3361212-3360974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
205, 15
               

               
Conread position:
               
12-217
               

               
Cow position:
               
chr21:8351501-8351303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
12-217
               

               
Cow position:
               
chr21:46242436-46242233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
160, 14
               

               
Conread position:
               
12-258
               

               
Cow position:
               
chr21:11645166-11644919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
13-164
               

               
Cow position:
               
chr21:29942810-29942957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
13-217
               

               
Cow position:
               
chr21:21077133-21077330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
13-267
               

               
Cow position:
               
chr21:42135820-42135564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
14-162
               

               
Cow position:
               
chr21:42465634-42465782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
14-217
               

               
Cow position:
               
chr21:4282063-4281867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
14-226
               

               
Cow position:
               
chr21:9998916-9998701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
148, 71
               

               
Conread position:
               
14-259
               

               
Cow position:
               
chr21:23568013-23568268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
15-235
               

               
Cow position:
               
chr21:31253341-31253569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr21:31277627-31277856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
15-250
               

               
Cow position:
               
chr21:1591357-1591594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
16-203
               

               
Cow position:
               
chr21:9334452-9334270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
16-209
               

               
Cow position:
               
chr21:13163700-13163887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
156, 10
               

               
Conread position:
               
16-226
               

               
Cow position:
               
chr21:10118360-10118575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
16-236
               

               
Cow position:
               
chr21:3763930-3763713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
16-237
               

               
Cow position:
               
chr21:29979950-29979730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
16-250
               

               
Cow position:
               
chr21:13128284-13128058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
196, 10
               

               
Conread position:
               
16-277
               

               
Cow position:
               
chr21:38449645-38449383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
17-193
               

               
Cow position:
               
chr21:17643162-17642984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
17-217
               

               
Cow position:
               
chr21:17193952-17193749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
17-217
               

               
Cow position:
               
chr21:45151815-45151615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
17-235
               

               
Cow position:
               
chr21:45850902-45850687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
192, 11
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr21:19363658-19363421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
18-235
               

               
Cow position:
               
chr21:5426755-5426966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
148, 8
               

               
Conread position:
               
19-242
               

               
Cow position:
               
chr21:18494776-18495001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
155, 9
               

               
Conread position:
               
20-226
               

               
Cow position:
               
chr21:28443569-28443360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 157
               

               
Conread position:
               
20-227
               

               
Cow position:
               
chr21:47764301-47764098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
105, 8
               

               
Conread position:
               
20-241
               

               
Cow position:
               
chr21:3813672-3813453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
22-217
               

               
Cow position:
               
chr21:42023936-42024126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
24-249
               

               
Cow position:
               
chr21:39450354-39450124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
25-214
               

               
Cow position:
               
chr21:4268688-4268877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
25-241
               

               
Cow position:
               
chr21:18842423-18842207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
25-241
               

               
Cow position:
               
chr21:40589668-40589454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
25-248
               

               
Cow position:
               
chr21:30607273-30607051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 94
               

               
Conread position:
               
27-217
               

               
Cow position:
               
chr21:7582092-7581902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
145, 133
               

               
Conread position:
               
28-219
               

               
Cow position:
               
chr21:28027621-28027813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
28-226
               

               
Cow position:
               
chr21:15911218-15911416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
29-185
               

               
Cow position:
               
chr21:802475-802323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
29-194
               

               
Cow position:
               
chr21:9990333-9990497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
30-226
               

               
Cow position:
               
chr21:17183741-17183939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
30-247
               

               
Cow position:
               
chr21:45375436-45375660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
76, 134
               

               
Conread position:
               
32-187
               

               
Cow position:
               
chr21:35897304-35897456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
32-250
               

               
Cow position:
               
chr21:8235722-8235514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
185, 86
               

               
Conread position:
               
33-226
               

               
Cow position:
               
chr21:33562838-33563026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
33-235
               

               
Cow position:
               
chr21:18790733-18790534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
35-254
               

               
Cow position:
               
chr21:32339912-32339694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
6, 68
               

               
Conread position:
               
37-219
               

               
Cow position:
               
chr21:41198583-41198399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 177
               

               
Conread position:
               
38-214
               

               
Cow position:
               
chr21:27146163-27145988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
38-250
               

               
Cow position:
               
chr21:47861023-47861237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
129, 78
               

               
Conread position:
               
40-250
               

               
Cow position:
               
chr21:21169664-21169451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
120, 63
               

               
Conread position:
               
57-235
               

               
Cow position:
               
chr21:24642366-24642545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
57-254
               

               
Cow position:
               
chr21:28244323-28244513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
160, 53
               

               
Conread position:
               
57-259
               

               
Cow position:
               
chr21:10633793-10633593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 61
               

               
Conread position:
               
64-241
               

               
Cow position:
               
chr21:957521-957703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 121
               

               
Conread position:
               
64-249
               

               
Cow position:
               
chr21:28617445-28617628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
68-255
               

               
Cow position:
               
chr21:29978903-29978717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 6
               

               
Conread position:
               
71-238
               

               
Cow position:
               
chr21:12462109-12461942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
71-248
               

               
Cow position:
               
chr21:11359899-11360074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 67
               

               
Conread position:
               
73-211
               

               
Cow position:
               
chr21:12723020-12723155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
96, 100
               
Show alignments to all cow chromosomes.