Cow genome map

Conread name: Ss1.1-rfhi4001b_p15.5

Conread position: 1-115
Cow position: chr28:3427130-3427016 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 25

Conread position: 1-119
Cow position: chr28:16925477-16925359 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 25

Conread position: 1-150
Cow position: chr28:5837846-5837992 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 38, 24

Conread position: 1-158
Cow position: chr28:5792436-5792587 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 25

Conread position: 1-158
Cow position: chr28:10295923-10296080 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 38, 24

Conread position: 1-158
Cow position: chr28:13356851-13356703 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 1-160
Cow position: chr28:14742534-14742694 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 27

Conread position: 1-160
Cow position: chr28:28766176-28766017 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 25

Conread position: 1-164
Cow position: chr28:16250310-16250147 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 40, 25

Conread position: 1-164
Cow position: chr28:16350309-16350154 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 25

Conread position: 1-164
Cow position: chr28:22351225-22351388 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 30

Conread position: 1-164
Cow position: chr28:23111668-23111831 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 25

Conread position: 1-165
Cow position: chr28:25762763-25762919 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 24

Conread position: 1-167
Cow position: chr28:8911485-8911319 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 24

Conread position: 1-169
Cow position: chr28:8103655-8103490 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 1-170
Cow position: chr28:16879534-16879376 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 27

Conread position: 1-174
Cow position: chr28:25334754-25334928 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 25

Conread position: 1-185
Cow position: chr28:19564859-19564678 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 27

Conread position: 1-192
Cow position: chr28:16211363-16211169 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 27

Conread position: 1-193
Cow position: chr28:11733391-11733198 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 42, 27

Conread position: 1-193
Cow position: chr28:17662960-17662767 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 25

Conread position: 1-194
Cow position: chr28:6971605-6971422 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 171, 27

Conread position: 1-205
Cow position: chr28:26269063-26269261 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 25

Conread position: 1-206
Cow position: chr28:7268202-7268001 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 27

Conread position: 1-208
Cow position: chr28:5128993-5128789 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 1-208
Cow position: chr28:5805259-5805454 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 163, 25

Conread position: 1-208
Cow position: chr28:8111339-8111547 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-209
Cow position: chr28:16441121-16441321 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 24

Conread position: 1-210
Cow position: chr28:5203936-5204131 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 1-210
Cow position: chr28:10534195-10533995 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 1-210
Cow position: chr28:13474042-13474239 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 171, 17

Conread position: 1-212
Cow position: chr28:1213815-1213603 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 25

Conread position: 1-214
Cow position: chr28:13889678-13889892 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 24

Conread position: 1-217
Cow position: chr28:2089230-2089447 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 24

Conread position: 1-217
Cow position: chr28:2279932-2279720 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 27

Conread position: 1-217
Cow position: chr28:3144156-3143940 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 171, 25

Conread position: 1-217
Cow position: chr28:4188260-4188475 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 25

Conread position: 1-217
Cow position: chr28:4282758-4282544 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 25

Conread position: 1-217
Cow position: chr28:7746077-7746294 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 24

Conread position: 1-217
Cow position: chr28:8787284-8787485 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 27

Conread position: 1-217
Cow position: chr28:12430343-12430553 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 43, 22

Conread position: 1-217
Cow position: chr28:14997798-14998010 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 167, 25

Conread position: 1-217
Cow position: chr28:18790745-18790960 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 25

Conread position: 1-217
Cow position: chr28:20124520-20124729 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 9

Conread position: 1-217
Cow position: chr28:23616136-23616354 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 24

Conread position: 1-217
Cow position: chr28:34082284-34082071 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 161, 25

Conread position: 1-217
Cow position: chr28:34229963-34230177 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 25

Conread position: 1-218
Cow position: chr28:6546656-6546435 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 27

Conread position: 1-219
Cow position: chr28:25411607-25411825 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-219
Cow position: chr28:34626768-34626985 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 24

Conread position: 1-225
Cow position: chr28:786646-786874 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 38, 24

Conread position: 1-225
Cow position: chr28:1811011-1810786 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 159, 25

Conread position: 1-225
Cow position: chr28:2819492-2819715 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 38, 24

Conread position: 1-225
Cow position: chr28:5212325-5212553 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 24

Conread position: 1-225
Cow position: chr28:17130875-17130648 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 153
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 57, 24

Conread position: 1-225
Cow position: chr28:24603913-24604133 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 24

Conread position: 1-225
Cow position: chr28:27683972-27683744 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 24

Conread position: 1-225
Cow position: chr28:29035662-29035435 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 25

Conread position: 1-225
Cow position: chr28:29824174-29824400 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 24

Conread position: 1-226
Cow position: chr28:7684943-7684725 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 163, 25

Conread position: 1-226
Cow position: chr28:15375091-15374864 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 11

Conread position: 1-226
Cow position: chr28:17287958-17288176 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 27

Conread position: 1-226
Cow position: chr28:19222411-19222193 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 209, 25

Conread position: 1-230
Cow position: chr28:21104113-21103874 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 39, 25

Conread position: 1-232
Cow position: chr28:26781817-26782052 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 24

Conread position: 1-235
Cow position: chr28:11931652-11931414 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 24

Conread position: 1-235
Cow position: chr28:13267514-13267753 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 1-235
Cow position: chr28:18354585-18354357 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 171, 97

Conread position: 1-235
Cow position: chr28:30303459-30303227 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 167, 25

Conread position: 1-236
Cow position: chr28:12758773-12758533 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 163, 25

Conread position: 1-237
Cow position: chr28:661855-662075 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 41, 25

Conread position: 1-237
Cow position: chr28:3914444-3914679 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 136, 27

Conread position: 1-237
Cow position: chr28:6960230-6960470 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 57, 24

Conread position: 1-238
Cow position: chr28:332437-332678 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr28:1199184-1199425 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 158
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr28:8066517-8066758 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 158
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr28:19186212-19186453 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 158
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr28:28471989-28472230 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chr28:34379789-34380030 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 21

Conread position: 1-238
Cow position: chr28:34878239-34878000 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 27

Conread position: 1-241
Cow position: chr28:5768927-5769171 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 26

Conread position: 1-241
Cow position: chr28:7512858-7512614 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 41, 27

Conread position: 1-241
Cow position: chr28:15007895-15008134 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 38, 25

Conread position: 1-241
Cow position: chr28:16215157-16214931 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 159, 25

Conread position: 1-242
Cow position: chr28:7228649-7228412 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 172, 27

Conread position: 1-247
Cow position: chr28:15605512-15605762 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-248
Cow position: chr28:3256535-3256777 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 163, 25

Conread position: 1-248
Cow position: chr28:4880530-4880288 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 25

Conread position: 1-248
Cow position: chr28:9390631-9390385 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 25

Conread position: 1-249
Cow position: chr28:21598519-21598273 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 173, 27

Conread position: 1-250
Cow position: chr28:800548-800295 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 164
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 24

Conread position: 1-250
Cow position: chr28:5684438-5684690 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 26

Conread position: 1-250
Cow position: chr28:5826682-5826933 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 25

Conread position: 1-250
Cow position: chr28:15285810-15285558 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 24

Conread position: 1-250
Cow position: chr28:21893792-21893539 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 164
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 24

Conread position: 1-254
Cow position: chr28:4022116-4022371 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 21

Conread position: 1-254
Cow position: chr28:7698247-7697995 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 173, 27

Conread position: 1-254
Cow position: chr28:9426608-9426367 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 38, 25

Conread position: 1-254
Cow position: chr28:12946678-12946932 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 112, 25

Conread position: 1-254
Cow position: chr28:15263990-15263731 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 15

Conread position: 1-255
Cow position: chr28:14150968-14151223 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 37, 24

Conread position: 1-255
Cow position: chr28:21380615-21380864 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 171, 25

Conread position: 1-256
Cow position: chr28:13693483-13693739 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 27

Conread position: 1-258
Cow position: chr28:9267834-9268094 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 24

Conread position: 1-259
Cow position: chr28:10642285-10642025 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 27

Conread position: 1-262
Cow position: chr28:1261994-1262256 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 24

Conread position: 1-262
Cow position: chr28:7751567-7751309 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 27

Conread position: 1-275
Cow position: chr28:11585474-11585201 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 25

Conread position: 1-277
Cow position: chr28:21354958-21355234 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 24

Conread position: 1-277
Cow position: chr28:22371942-22371678 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 27

Conread position: 1-279
Cow position: chr28:16364237-16363960 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 27

Conread position: 1-282
Cow position: chr28:3751053-3751330 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 167, 27

Conread position: 1-282
Cow position: chr28:4587830-4588116 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 27, 59

Conread position: 1-283
Cow position: chr28:5771100-5771379 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 25

Conread position: 1-283
Cow position: chr28:10669308-10669587 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 37, 24

Conread position: 1-283
Cow position: chr28:25727115-25727386 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 171, 25

Conread position: 1-293
Cow position: chr28:29683226-29683515 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-303
Cow position: chr28:11426811-11426504 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 175, 27

Conread position: 2-165
Cow position: chr28:17316595-17316757 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 99, 16

Conread position: 2-170
Cow position: chr28:15063604-15063437 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 26

Conread position: 2-190
Cow position: chr28:3024177-3023993 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 24

Conread position: 2-194
Cow position: chr28:16450959-16450780 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 170, 5

Conread position: 2-207
Cow position: chr28:20760189-20759984 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 27

Conread position: 2-210
Cow position: chr28:11527521-11527320 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 45, 26

Conread position: 2-217
Cow position: chr28:8382068-8382284 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 23

Conread position: 2-217
Cow position: chr28:13371433-13371227 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 24

Conread position: 2-217
Cow position: chr28:25563810-25564027 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 27

Conread position: 2-217
Cow position: chr28:30098866-30099082 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 23

Conread position: 2-217
Cow position: chr28:34598310-34598526 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 23

Conread position: 2-226
Cow position: chr28:23675879-23676096 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 175, 24

Conread position: 2-235
Cow position: chr28:8963258-8963494 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 39, 23

Conread position: 2-238
Cow position: chr28:7970749-7970509 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 23

Conread position: 2-238
Cow position: chr28:25282940-25283172 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 168, 44

Conread position: 2-241
Cow position: chr28:14933697-14933939 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 165, 24

Conread position: 2-249
Cow position: chr28:20313010-20313256 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 37, 24

Conread position: 2-249
Cow position: chr28:23839944-23840182 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 215, 24

Conread position: 2-249
Cow position: chr28:26784733-26784484 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 5, 25

Conread position: 2-255
Cow position: chr28:21844691-21844942 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 170, 24

Conread position: 2-256
Cow position: chr28:12619297-12619554 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 23

Conread position: 2-277
Cow position: chr28:7549327-7549055 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 167, 26

Conread position: 2-277
Cow position: chr28:18591005-18591274 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 26

Conread position: 3-163
Cow position: chr28:11759801-11759647 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 23

Conread position: 3-181
Cow position: chr28:7372515-7372342 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 23

Conread position: 3-192
Cow position: chr28:10888399-10888589 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 25

Conread position: 3-236
Cow position: chr28:15272525-15272294 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 23

Conread position: 3-236
Cow position: chr28:31110269-31110036 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 23

Conread position: 3-255
Cow position: chr28:22132662-22132912 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 23

Conread position: 3-258
Cow position: chr28:11752409-11752151 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 26

Conread position: 3-293
Cow position: chr28:13786896-13787189 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 190
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 22

Conread position: 4-119
Cow position: chr28:4536207-4536322 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 21

Conread position: 4-158
Cow position: chr28:31223857-31223706 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 4-163
Cow position: chr28:11924080-11923921 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 22

Conread position: 4-208
Cow position: chr28:23231329-23231128 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 162, 20

Conread position: 4-217
Cow position: chr28:3408480-3408261 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 154, 25

Conread position: 4-225
Cow position: chr28:23480525-23480301 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 24

Conread position: 4-226
Cow position: chr28:17738342-17738116 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 35, 22

Conread position: 4-250
Cow position: chr28:7590447-7590199 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 116

Conread position: 4-250
Cow position: chr28:8408478-8408716 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 168, 16

Conread position: 4-254
Cow position: chr28:16085062-16085308 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 36, 17

Conread position: 4-257
Cow position: chr28:10616214-10615972 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 5-135
Cow position: chr28:1537443-1537574 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 39, 18

Conread position: 5-165
Cow position: chr28:9177016-9176858 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 21

Conread position: 5-165
Cow position: chr28:19133521-19133681 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 21

Conread position: 5-194
Cow position: chr28:23459876-23460074 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 21

Conread position: 5-196
Cow position: chr28:8372208-8372399 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 34, 20

Conread position: 5-217
Cow position: chr28:12048961-12048757 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 5-217
Cow position: chr28:14657438-14657648 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 20

Conread position: 5-226
Cow position: chr28:16204592-16204371 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 161, 21

Conread position: 5-234
Cow position: chr28:11380305-11380077 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 34, 21

Conread position: 5-235
Cow position: chr28:10744947-10745179 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 20

Conread position: 5-235
Cow position: chr28:26533280-26533516 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 20

Conread position: 5-241
Cow position: chr28:24996851-24996616 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 10, 24

Conread position: 5-253
Cow position: chr28:16244021-16243774 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 23

Conread position: 5-254
Cow position: chr28:17029979-17029734 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 11, 23

Conread position: 5-259
Cow position: chr28:11827234-11827478 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 155, 23

Conread position: 5-262
Cow position: chr28:24887116-24887374 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 20

Conread position: 5-277
Cow position: chr28:5904474-5904735 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 169, 24

Conread position: 5-283
Cow position: chr28:16253117-16252847 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 167, 21

Conread position: 6-170
Cow position: chr28:5366394-5366230 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 111

Conread position: 6-217
Cow position: chr28:3246076-3246277 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 22

Conread position: 6-217
Cow position: chr28:11451728-11451517 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 34, 23

Conread position: 6-217
Cow position: chr28:15688780-15688986 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 159, 20

Conread position: 6-217
Cow position: chr28:31648813-31649020 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 152, 22

Conread position: 6-224
Cow position: chr28:13176940-13176728 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 20

Conread position: 6-235
Cow position: chr28:26719099-26719317 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 20

Conread position: 6-268
Cow position: chr28:8022372-8022109 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 20

Conread position: 7-217
Cow position: chr28:10172674-10172468 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 19

Conread position: 7-217
Cow position: chr28:21868192-21868401 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 168, 21

Conread position: 7-266
Cow position: chr28:3493044-3492792 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 21

Conread position: 8-162
Cow position: chr28:1099901-1099754 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 20

Conread position: 8-192
Cow position: chr28:3480009-3480193 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 20

Conread position: 8-208
Cow position: chr28:11786967-11786775 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 164, 18

Conread position: 8-208
Cow position: chr28:14234716-14234910 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 164, 10

Conread position: 8-209
Cow position: chr28:25805414-25805612 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 152, 18

Conread position: 8-217
Cow position: chr28:19026262-19026066 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 18

Conread position: 8-217
Cow position: chr28:25424562-25424354 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 19

Conread position: 8-218
Cow position: chr28:5931094-5931299 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 31, 17

Conread position: 8-234
Cow position: chr28:26922623-26922401 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 167, 16

Conread position: 8-238
Cow position: chr28:7606968-7607202 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 18

Conread position: 8-238
Cow position: chr28:25070857-25071093 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 18

Conread position: 8-241
Cow position: chr28:23621289-23621517 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 201, 20

Conread position: 9-214
Cow position: chr28:6861695-6861897 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 19

Conread position: 9-241
Cow position: chr28:21502137-21502366 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 150, 17

Conread position: 9-255
Cow position: chr28:16686775-16687011 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 17

Conread position: 10-194
Cow position: chr28:6059730-6059542 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 16

Conread position: 10-208
Cow position: chr28:22484991-22485185 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 16

Conread position: 10-217
Cow position: chr28:23410581-23410379 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 16

Conread position: 10-217
Cow position: chr28:23793558-23793361 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 10-226
Cow position: chr28:16370332-16370122 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 19

Conread position: 10-238
Cow position: chr28:30608438-30608220 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 10-249
Cow position: chr28:24343109-24343351 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 36

Conread position: 10-277
Cow position: chr28:18934195-18934457 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 34, 111

Conread position: 11-201
Cow position: chr28:29199471-29199656 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 11-217
Cow position: chr28:17638123-17637921 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 15

Conread position: 11-221
Cow position: chr28:32813255-32813044 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 15

Conread position: 12-217
Cow position: chr28:2862606-2862811 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 27, 13

Conread position: 12-217
Cow position: chr28:5773387-5773582 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 12-217
Cow position: chr28:33051765-33051974 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 14

Conread position: 14-268
Cow position: chr28:11687286-11687028 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 14

Conread position: 14-278
Cow position: chr28:25596379-25596635 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 14

Conread position: 15-194
Cow position: chr28:5236852-5236675 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 11

Conread position: 15-203
Cow position: chr28:16386758-16386576 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 11

Conread position: 15-217
Cow position: chr28:13242076-13241882 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 11

Conread position: 15-217
Cow position: chr28:13607633-13607831 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 28, 13

Conread position: 15-219
Cow position: chr28:16354872-16354658 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 14

Conread position: 15-264
Cow position: chr28:8348905-8348653 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 24, 6

Conread position: 15-283
Cow position: chr28:3078930-3078672 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 11

Conread position: 16-168
Cow position: chr28:13936165-13936312 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 9

Conread position: 16-217
Cow position: chr28:19080099-19079897 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 10

Conread position: 16-235
Cow position: chr28:22345768-22345984 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 12

Conread position: 16-259
Cow position: chr28:23775793-23776037 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 145

Conread position: 17-164
Cow position: chr28:16475745-16475886 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 9, 0

Conread position: 17-217
Cow position: chr28:2905330-2905521 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 27, 11

Conread position: 17-217
Cow position: chr28:19222847-19222650 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 142, 11

Conread position: 17-241
Cow position: chr28:26103465-26103681 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 9

Conread position: 17-250
Cow position: chr28:22321172-22321409 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 157, 9

Conread position: 18-144
Cow position: chr28:23254048-23253924 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 8

Conread position: 18-195
Cow position: chr28:24646291-24646468 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 8

Conread position: 18-226
Cow position: chr28:2898746-2898956 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 11

Conread position: 18-258
Cow position: chr28:22170967-22170727 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 26, 11

Conread position: 20-168
Cow position: chr28:22583385-22583529 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 20-188
Cow position: chr28:7723646-7723474 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 159

Conread position: 24-226
Cow position: chr28:8682095-8681884 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 74

Conread position: 25-194
Cow position: chr28:16109701-16109865 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 93

Conread position: 26-173
Cow position: chr28:25498746-25498598 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 27-215
Cow position: chr28:10529724-10529540 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 91

Conread position: 27-217
Cow position: chr28:14649106-14649294 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 93

Conread position: 27-253
Cow position: chr28:4070728-4070954 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 71, 92

Conread position: 28-226
Cow position: chr28:3745961-3746161 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 136
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 11, 149

Conread position: 28-283
Cow position: chr28:4914342-4914082 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 240

Conread position: 31-217
Cow position: chr28:5658317-5658497 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 31-277
Cow position: chr28:9285615-9285367 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 130

Conread position: 32-217
Cow position: chr28:34430663-34430476 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 145

Conread position: 34-217
Cow position: chr28:3077759-3077935 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 84

Conread position: 34-217
Cow position: chr28:11884757-11884574 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 64

Conread position: 34-283
Cow position: chr28:26684882-26685127 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 181, 9

Conread position: 36-235
Cow position: chr28:8347503-8347698 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 136, 74

Conread position: 37-226
Cow position: chr28:26340106-26340300 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 127, 148

Conread position: 38-241
Cow position: chr28:5144752-5144547 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 81

Conread position: 39-277
Cow position: chr28:33163696-33163457 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 120

Conread position: 58-235
Cow position: chr28:2738021-2737842 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 102

Conread position: 68-265
Cow position: chr28:8935734-8935931 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 104, 92

Conread position: 78-217
Cow position: chr28:23724645-23724509 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 91, 40

Conread position: 86-254
Cow position: chr28:118237-118067 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 60

Show alignments to all cow chromosomes.