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Cow genome map

           
Conread name:
           
Ss1.1-rfhi4001b_p15.5
        

               
Conread position:
               
1-111
               

               
Cow position:
               
chr29:15289467-15289577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-116
               

               
Cow position:
               
chr29:4328161-4328275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr29:9332871-9333010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr29:1582899-1582744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr29:29066153-29066311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr29:3584398-3584234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr29:22720855-22721017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr29:26778615-26778778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr29:4875176-4875003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr29:5062859-5063027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
168, 27
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr29:35434597-35434778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr29:18781593-18781774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
159, 25
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr29:3972824-3972642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr29:30028704-30028516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr29:406537-406345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr29:14888848-14889040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr29:24033523-24033717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr29:38910277-38910084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr29:686464-686270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
161, 25
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr29:18748857-18748665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
165, 25
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:43252960-43252767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
173, 25
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr29:22948936-22948738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr29:36356578-36356770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr29:32308597-32308396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr29:35501921-35501723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
173, 25
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr29:37719639-37719841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
163, 27
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr29:19756175-19756378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr29:10456825-10456627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
168, 25
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr29:37470842-37470632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr29:20626304-20626509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
173, 25
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr29:39111581-39111379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr29:26130510-26130721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr29:26734760-26734967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:961646-961863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:1325168-1325379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
196, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:1933831-1933615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:4625266-4625058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:5550727-5550944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:5977394-5977172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:9709426-9709634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:12005037-12004822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:15940911-15940695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:16609465-16609681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:20255123-20255340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:21000366-21000582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:24650638-24650421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:26160873-26160655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:32290329-32290547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:35406067-35405853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:35630689-35630471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr29:528563-528335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr29:7811239-7811011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr29:8935213-8935440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr29:16348168-16348395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr29:43327750-43327976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr29:87290-87065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
159, 25
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr29:465675-465447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr29:15738617-15738391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr29:20674081-20673849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr29:40583524-40583744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr29:37961245-37961024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
165, 17
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr29:28689337-28689572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr29:11684739-11684970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:2103801-2104042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:5238445-5238684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:5241355-5241594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:5425898-5425657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:6293740-6293511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
158, 28
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:7666302-7666066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:14569256-14569497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:15767666-15767425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:17773668-17773909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:26017784-26017541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:39567413-39567650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:42253784-42253543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:42406390-42406635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
161, 25
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:45650615-45650380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
162, 25
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr29:17378-17145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr29:1022005-1022261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr29:9195398-9195154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
6, 28
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr29:28195792-28195547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr29:31926563-31926323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr29:15944296-15944546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr29:2071841-2071600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
177, 28
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr29:4043134-4043387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr29:18878774-18878524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr29:25957973-25957720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr29:29056910-29057154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
43, 76
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr29:4611320-4611574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr29:6844902-6844654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
163, 25
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr29:15965594-15965339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr29:22021058-22020803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr29:1307137-1306882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr29:2415084-2414834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
153, 25
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr29:3395837-3396084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr29:35281230-35281474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
171, 25
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr29:14501321-14501569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
159, 25
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr29:29589190-29588932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr29:8164136-8163877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr29:479113-479364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr29:4201846-4202106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr29:41811850-41811603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
218, 27
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr29:4648993-4648725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr29:6455605-6455867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr29:9861142-9860880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr29:11114578-11114840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr29:34293442-34293180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr29:38746034-38745772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr29:19761999-19762257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr29:32353555-32353830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr29:35636151-35636426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr29:2744545-2744268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr29:26771168-26771437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
215, 27
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr29:3704476-3704196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
164, 25
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr29:34745927-34745655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr29:5138960-5139254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
159, 25
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr29:7953789-7954078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr29:32298684-32298973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
2-165
               

               
Cow position:
               
chr29:30433407-30433570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr29:21665698-21665859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr29:11136160-11135989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
162, 26
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr29:28883808-28884023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chr29:36530591-36530815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr29:25926826-25926587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr29:24345736-24345488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr29:6925750-6925977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
170, 24
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr29:36216846-36217082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
170, 26
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr29:17041375-17041621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr29:28775726-28775487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
170, 24
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr29:21196922-21196676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
217, 24
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr29:40096693-40096937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
160, 24
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr29:23874184-23874436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr29:28273660-28273407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr29:5892575-5892823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
170, 24
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr29:4480446-4480174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr29:20933433-20933714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
3-146
               

               
Cow position:
               
chr29:10296711-10296572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
3-164
               

               
Cow position:
               
chr29:133921-134083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr29:2694663-2694877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr29:26289357-26289147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
169, 23
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr29:27007848-27008067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr29:7408160-7407925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr29:26980124-26980375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
4-130
               

               
Cow position:
               
chr29:5046544-5046418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr29:2263298-2263122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr29:4065818-4066048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
171, 28
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr29:8125863-8125628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
165, 22
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr29:4120576-4120832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
158, 22
               

               
Conread position:
               
5-158
               

               
Cow position:
               
chr29:254812-254965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr29:21265466-21265621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr29:45588742-45588579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr29:18338815-18338611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr29:40165973-40166176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr29:32521600-32521806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
168, 21
               

               
Conread position:
               
5-217
               

               
Cow position:
               
chr29:11696264-11696469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
5-217
               

               
Cow position:
               
chr29:26615994-26615783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
5-217
               

               
Cow position:
               
chr29:40337793-40337590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr29:2644574-2644352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
154, 21
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr29:19338710-19338938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr29:477838-478067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
161, 21
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr29:9139139-9139376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
5-250
               

               
Cow position:
               
chr29:26335647-26335401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr29:42268422-42268677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr29:24604417-24604158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
160, 21
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr29:41530581-41530846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
138, 19
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr29:2984618-2984888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
155, 21
               

               
Conread position:
               
5-314
               

               
Cow position:
               
chr29:9686270-9685966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
6-202
               

               
Cow position:
               
chr29:16195584-16195774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
6-208
               

               
Cow position:
               
chr29:26129231-26129432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
157, 22
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr29:12784224-12784017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
6-224
               

               
Cow position:
               
chr29:25088485-25088699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr29:21933381-21933164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr29:12679886-12680110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
6-247
               

               
Cow position:
               
chr29:6217816-6217576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr29:7956251-7956024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
7-247
               

               
Cow position:
               
chr29:4804966-4805204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr29:28197275-28197034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr29:94811-94615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
164, 20
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr29:3502795-3502991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr29:17109704-17109907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr29:24952420-24952627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
158, 18
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr29:29974775-29974982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr29:44233215-44233011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
8-235
               

               
Cow position:
               
chr29:20178391-20178173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
8-237
               

               
Cow position:
               
chr29:13615909-13615675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
8-248
               

               
Cow position:
               
chr29:22175427-22175660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
9-179
               

               
Cow position:
               
chr29:26137521-26137691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr29:28868366-28868602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
10-178
               

               
Cow position:
               
chr29:38760421-38760257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
10-235
               

               
Cow position:
               
chr29:5919589-5919363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
10-235
               

               
Cow position:
               
chr29:5948051-5947833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
10-237
               

               
Cow position:
               
chr29:29769610-29769390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
10-238
               

               
Cow position:
               
chr29:9911913-9912137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr29:32799967-32799742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
10-254
               

               
Cow position:
               
chr29:18072665-18072913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
10-268
               

               
Cow position:
               
chr29:732358-732607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
10-282
               

               
Cow position:
               
chr29:41076292-41076027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
11-217
               

               
Cow position:
               
chr29:40891965-40891757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
11-218
               

               
Cow position:
               
chr29:31928716-31928921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
11-253
               

               
Cow position:
               
chr29:37785442-37785197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
12-226
               

               
Cow position:
               
chr29:109448-109648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
148, 14
               

               
Conread position:
               
12-251
               

               
Cow position:
               
chr29:37599466-37599233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
160, 16
               

               
Conread position:
               
13-217
               

               
Cow position:
               
chr29:16756794-16756998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
159, 13
               

               
Conread position:
               
13-255
               

               
Cow position:
               
chr29:3237620-3237377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
14-194
               

               
Cow position:
               
chr29:6813183-6813360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
155, 10
               

               
Conread position:
               
14-201
               

               
Cow position:
               
chr29:41850073-41849886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
175, 12
               

               
Conread position:
               
14-235
               

               
Cow position:
               
chr29:18212242-18212033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
153, 12
               

               
Conread position:
               
14-238
               

               
Cow position:
               
chr29:13372403-13372628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
14-238
               

               
Cow position:
               
chr29:19389226-19389450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
14-250
               

               
Cow position:
               
chr29:21236856-21237089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
15-238
               

               
Cow position:
               
chr29:35738529-35738308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
16-242
               

               
Cow position:
               
chr29:4194379-4194150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
16-253
               

               
Cow position:
               
chr29:34297823-34297593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
16-275
               

               
Cow position:
               
chr29:585023-585278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
168, 102
               

               
Conread position:
               
18-226
               

               
Cow position:
               
chr29:17222152-17222364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
18-241
               

               
Cow position:
               
chr29:32963298-32963522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
20-241
               

               
Cow position:
               
chr29:13553878-13554101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
23-217
               

               
Cow position:
               
chr29:10659599-10659399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
24-217
               

               
Cow position:
               
chr29:24103799-24103606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
151, 136
               

               
Conread position:
               
24-283
               

               
Cow position:
               
chr29:18735894-18735637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
20, 108
               

               
Conread position:
               
25-250
               

               
Cow position:
               
chr29:11915567-11915795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
27-226
               

               
Cow position:
               
chr29:23984212-23984007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
27-231
               

               
Cow position:
               
chr29:19792528-19792317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
28-250
               

               
Cow position:
               
chr29:36183029-36183256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
28-255
               

               
Cow position:
               
chr29:3502309-3502547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 156
               

               
Conread position:
               
29-268
               

               
Cow position:
               
chr29:20903534-20903299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
31-237
               

               
Cow position:
               
chr29:11562370-11562574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
32-250
               

               
Cow position:
               
chr29:17409086-17409310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
33-283
               

               
Cow position:
               
chr29:25474665-25474925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
6, 208
               

               
Conread position:
               
34-250
               

               
Cow position:
               
chr29:3711145-3711365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
35-217
               

               
Cow position:
               
chr29:11704883-11705062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
36-225
               

               
Cow position:
               
chr29:34744855-34744672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
136, 67
               

               
Conread position:
               
38-217
               

               
Cow position:
               
chr29:22714964-22714785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
131, 137
               

               
Conread position:
               
38-224
               

               
Cow position:
               
chr29:16309514-16309691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 67
               

               
Conread position:
               
38-249
               

               
Cow position:
               
chr29:4520099-4520310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
134, 80
               

               
Conread position:
               
38-254
               

               
Cow position:
               
chr29:17668259-17668467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
44-241
               

               
Cow position:
               
chr29:39642946-39643141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
44-280
               

               
Cow position:
               
chr29:23844601-23844837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
137, 116
               

               
Conread position:
               
45-238
               

               
Cow position:
               
chr29:1229379-1229568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
57-214
               

               
Cow position:
               
chr29:28446477-28446320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
115, 103
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr29:14484761-14484535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
67-278
               

               
Cow position:
               
chr29:22778389-22778178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
105, 179
               
Show alignments to all cow chromosomes.