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Cow genome map

           
Conread name:
           
Ss1.1-rfhi4001b_p15.5
        

               
Conread position:
               
1-103
               

               
Cow position:
               
chr4:20117127-20117026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-103
               

               
Cow position:
               
chr4:41999463-41999363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-108
               

               
Cow position:
               
chr4:41186647-41186539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-120
               

               
Cow position:
               
chr4:58424664-58424548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr4:61450489-61450621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr4:48409838-48409693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr4:5577769-5577613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr4:26009167-26009328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr4:38999148-38999304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr4:38945766-38945932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr4:49409186-49409358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr4:40056688-40056863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr4:22072952-22072776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr4:53100527-53100704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
172, 27
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr4:28613542-28613727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr4:45511253-45511060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
139, 25
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr4:7258706-7258508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr4:9795650-9795461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr4:17833184-17832992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
159, 25
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr4:26469365-26469556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr4:41097641-41097828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr4:48485714-48485914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr4:56409903-56410098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
154, 47
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr4:19497529-19497335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr4:7430040-7430243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr4:242947-243150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
171, 18
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:10703964-10703758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:12464567-12464774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:13271869-13272076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:15848056-15848264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:17112157-17111953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:42424080-42423877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:46176743-46176535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr4:12903537-12903744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
17, 75
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr4:16799471-16799262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr4:64072631-64072423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr4:68387513-68387717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr4:620431-620223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
174, 22
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr4:36840998-36841210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr4:45644592-45644381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:3687649-3687853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:11193903-11194113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:19597592-19597386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
174, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:359562-359779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:637719-637934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
159, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:1014788-1015001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:5610349-5610138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
168, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:7249848-7249636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:10037131-10037347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:10731940-10732156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
171, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:12591490-12591278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:14470847-14470638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
171, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:16339871-16339666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:18519448-18519664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:19097013-19097220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
167, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:19582895-19582684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:20243851-20244069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:22215935-22215719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:23060285-23060063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:23599891-23600110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:23647122-23646913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:24119190-24118974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:25197776-25197561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
166, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:26175522-26175308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:27546480-27546699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:30779114-30778896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:36730911-36731127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:37620166-37619954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:37703987-37704199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
169, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:43064022-43064239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:45662779-45662576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:46668291-46668500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:48030536-48030753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:53208022-53208227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:54468575-54468359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:56852618-56852836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:60433142-60432924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:60897552-60897343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:62772214-62771992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:63266519-63266736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr4:37342838-37343049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr4:62471789-62472008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr4:9444968-9444748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
139, 25
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:3354267-3354039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:4380245-4380473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:17877637-17877865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:30219959-30219731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:39006679-39006907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:68076807-68076585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
172, 25
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr4:25806620-25806844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr4:41441286-41441511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr4:55271038-55270813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
210, 25
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr4:52601777-52602014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:12003944-12004179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:26400678-26400916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
159, 25
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:68944455-68944217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr4:29811849-29811608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr4:2893745-2893983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:604381-604140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:4321285-4321043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:4487866-4488107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:16859043-16858806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:18599722-18599481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:20327994-20327754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:21392083-21391856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
171, 29
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:27997405-27997640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 88
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:36900052-36900291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:37553323-37553082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:41599037-41599280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:46708809-46708568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:48736557-48736798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:49002724-49002965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:50802311-50802552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:61972754-61972504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:63002117-63002358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:65198122-65197881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:11090965-11090739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
171, 27
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:18489669-18489425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:23853925-23854150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:32260126-32259885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:45738761-45738519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:57555687-57555931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:10055932-10056172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:53832772-53833008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
139, 28
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr4:43543013-43542772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr4:66112356-66112107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr4:11201538-11201783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr4:51903323-51903570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr4:7777-7523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr4:19561416-19561651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr4:42672892-42673140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:11901842-11901594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:25369837-25370083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:68233696-68233934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr4:11187176-11187422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr4:11671171-11671423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr4:19584425-19584686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr4:30690445-30690685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr4:61215277-61215028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr4:3850274-3850522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
216, 25
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr4:30574177-30574421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:19434982-19435231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
171, 27
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:44782095-44782346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:285378-285616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:14352960-14352699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:19265294-19265546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
163, 25
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:23451375-23451124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:48137635-48137883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
171, 24
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:43370129-43369879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr4:21257408-21257151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr4:39128252-39128512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr4:13327236-13326977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr4:17052875-17052620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:33935441-33935703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:51898723-51898983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr4:59833661-59833929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr4:6395767-6396029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr4:11384180-11384442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr4:16008838-16008576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr4:18738065-18737803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr4:19534205-19534467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr4:38864730-38864991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr4:40663978-40663716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr4:42381633-42381371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr4:63365656-63365382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr4:36893074-36893350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr4:21058664-21058383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
215, 25
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr4:43148125-43148404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:9136998-9137273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
164, 25
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr4:18095955-18095674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr4:29035636-29035913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr4:18255585-18255849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
218, 25
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr4:22138515-22138225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr4:44839164-44838895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr4:561122-561415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr4:28855789-28856078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr4:33554101-33553812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr4:40229748-40230037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr4:47056746-47057041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr4:49176165-49176454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr4:60856402-60856697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr4:15618373-15618675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
2-145
               

               
Cow position:
               
chr4:38067605-38067748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
2-161
               

               
Cow position:
               
chr4:19421053-19421210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr4:22528665-22528497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
164, 24
               

               
Conread position:
               
2-194
               

               
Cow position:
               
chr4:46550106-46550298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr4:12018279-12018473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr4:48961768-48961560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr4:14742981-14743186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr4:19142011-19142217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
170, 26
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr4:22010336-22010139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr4:56233413-56233614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
166, 26
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr4:19306978-19307190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
164, 26
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr4:5984323-5984108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr4:34209748-34209964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr4:37915607-37915405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr4:37935559-37935351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr4:44734297-44734513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr4:46274915-46275125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr4:53545751-53545961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr4:61391479-61391271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 26
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr4:15872000-15871774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
165, 24
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr4:58834684-58834461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr4:16637876-16637651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
162, 24
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr4:480285-480051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr4:509176-508948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr4:11025641-11025397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr4:51850917-51851171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr4:11872190-11871938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr4:15635721-15635479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr4:33421639-33421380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
157, 24
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr4:59838980-59839241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr4:64156408-64156669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr4:24002247-24001974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr4:53208959-53209228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr4:22051745-22051474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr4:43866129-43865857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr4:44700209-44699921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr4:45377139-45377427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
3-162
               

               
Cow position:
               
chr4:4085413-4085256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr4:69406091-69406291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr4:16736226-16736435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr4:40414908-40414700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr4:2422305-2422516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr4:30974060-30974273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
169, 21
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr4:34171846-34171637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr4:3990899-3990669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr4:17474160-17474410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr4:45641-45894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
165, 23
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr4:15904821-15905071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr4:66173074-66172805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
4-162
               

               
Cow position:
               
chr4:46477215-46477057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
4-165
               

               
Cow position:
               
chr4:41833541-41833384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr4:27540345-27540531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr4:38799468-38799282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
156, 22
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr4:54937610-54937799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr4:33910031-33910212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
168, 22
               

               
Conread position:
               
4-210
               

               
Cow position:
               
chr4:8801227-8801427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr4:10412103-10412305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr4:42480909-42481124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
4-217
               

               
Cow position:
               
chr4:63459491-63459278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
170, 28
               

               
Conread position:
               
4-217
               

               
Cow position:
               
chr4:65168282-65168073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
159, 24
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr4:1915854-1915644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
4-224
               

               
Cow position:
               
chr4:29237426-29237215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr4:42232392-42232602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr4:56570529-56570764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
161, 22
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr4:10992476-10992238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
141, 26
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr4:4084722-4084483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
4-257
               

               
Cow position:
               
chr4:54501725-54501472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr4:39231799-39231530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr4:58248133-58248396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
215, 12
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr4:40576191-40576040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr4:46385853-46385693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chr4:58613240-58613070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr4:22849985-22849815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr4:27292234-27292029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
5-216
               

               
Cow position:
               
chr4:39455779-39455980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
5-217
               

               
Cow position:
               
chr4:3388277-3388480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
157, 21
               

               
Conread position:
               
5-217
               

               
Cow position:
               
chr4:24458372-24458172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
5-217
               

               
Cow position:
               
chr4:56240120-56239922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr4:45589858-45589660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
167, 11
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr4:22073584-22073370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
167, 21
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr4:25359330-25359555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr4:5999469-5999232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr4:50203472-50203718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
5-250
               

               
Cow position:
               
chr4:25889110-25888861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 108
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr4:31023170-31023423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr4:21371125-21371364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
167, 21
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr4:52748733-52748481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr4:21064764-21065026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
167, 23
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr4:5461128-5460870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr4:19007767-19008038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr4:59785041-59785319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
6-116
               

               
Cow position:
               
chr4:48172839-48172946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
6-163
               

               
Cow position:
               
chr4:61999727-61999576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr4:59106085-59105926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
6-170
               

               
Cow position:
               
chr4:3251810-3251647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
6-194
               

               
Cow position:
               
chr4:19438184-19438370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr4:11021925-11021721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr4:22259692-22259494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr4:27529839-27530050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr4:44073044-44072833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr4:44612729-44612937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
162, 20
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr4:57931637-57931846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
157, 20
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr4:63349750-63349542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr4:15623570-15623781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr4:5850606-5850383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr4:16239411-16239195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr4:46456321-46456106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
166, 20
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr4:36755475-36755701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 120
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr4:54930690-54930460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr4:22345289-22345058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
6-254
               

               
Cow position:
               
chr4:51739977-51739738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr4:20139793-20139524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
156, 22
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr4:28772341-28772076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
6-320
               

               
Cow position:
               
chr4:46258211-46258525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
7-165
               

               
Cow position:
               
chr4:11175818-11175974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
7-214
               

               
Cow position:
               
chr4:7571136-7571339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
7-217
               

               
Cow position:
               
chr4:36724769-36724971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr4:21064277-21064061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
7-259
               

               
Cow position:
               
chr4:10968659-10968414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
8-165
               

               
Cow position:
               
chr4:55508687-55508535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
8-168
               

               
Cow position:
               
chr4:61969910-61969750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
8-180
               

               
Cow position:
               
chr4:52632241-52632075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
8-185
               

               
Cow position:
               
chr4:24671450-24671272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
8-216
               

               
Cow position:
               
chr4:23509315-23509525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr4:24744685-24744476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
8-217
               

               
Cow position:
               
chr4:58261425-58261221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
136, 18
               

               
Conread position:
               
8-226
               

               
Cow position:
               
chr4:33395960-33395756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
8-241
               

               
Cow position:
               
chr4:22744052-22744279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
164, 20
               

               
Conread position:
               
8-241
               

               
Cow position:
               
chr4:47348560-47348787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
8-241
               

               
Cow position:
               
chr4:51783908-51784138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
8-254
               

               
Cow position:
               
chr4:19313733-19313983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
155, 18
               

               
Conread position:
               
8-254
               

               
Cow position:
               
chr4:27276813-27276571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
8-256
               

               
Cow position:
               
chr4:39009695-39009940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
210, 35
               

               
Conread position:
               
8-258
               

               
Cow position:
               
chr4:17660477-17660215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
8-277
               

               
Cow position:
               
chr4:33433530-33433265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
164, 18
               

               
Conread position:
               
8-280
               

               
Cow position:
               
chr4:34166243-34165977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
162, 18
               

               
Conread position:
               
9-197
               

               
Cow position:
               
chr4:53763390-53763203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
9-206
               

               
Cow position:
               
chr4:59871227-59871407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
157, 17
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr4:20298998-20299204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
9-217
               

               
Cow position:
               
chr4:203419-203209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
9-237
               

               
Cow position:
               
chr4:54190829-54191044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
163, 17
               

               
Conread position:
               
9-259
               

               
Cow position:
               
chr4:41867173-41867420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
10-119
               

               
Cow position:
               
chr4:22547069-22546961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
10-158
               

               
Cow position:
               
chr4:9586-9444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
10-165
               

               
Cow position:
               
chr4:49068169-49068324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
10-170
               

               
Cow position:
               
chr4:19577793-19577951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
10-202
               

               
Cow position:
               
chr4:33623448-33623641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
10-204
               

               
Cow position:
               
chr4:56514209-56514016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
10-217
               

               
Cow position:
               
chr4:2141476-2141678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
162, 18
               

               
Conread position:
               
10-217
               

               
Cow position:
               
chr4:4672605-4672398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
10-217
               

               
Cow position:
               
chr4:41301261-41301057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
10-254
               

               
Cow position:
               
chr4:65650395-65650159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
11-163
               

               
Cow position:
               
chr4:22354670-22354826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
118, 15
               

               
Conread position:
               
12-173
               

               
Cow position:
               
chr4:41898988-41899149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
12-187
               

               
Cow position:
               
chr4:15462541-15462372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
12-214
               

               
Cow position:
               
chr4:66918633-66918840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
12-226
               

               
Cow position:
               
chr4:46597115-46597323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
148, 14
               

               
Conread position:
               
13-235
               

               
Cow position:
               
chr4:23847318-23847094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
13-256
               

               
Cow position:
               
chr4:34630635-34630864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
204, 15
               

               
Conread position:
               
14-192
               

               
Cow position:
               
chr4:19541860-19542045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
14-217
               

               
Cow position:
               
chr4:19699833-19700039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
14-217
               

               
Cow position:
               
chr4:46591396-46591598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
14-217
               

               
Cow position:
               
chr4:65826121-65825913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
14-217
               

               
Cow position:
               
chr4:65919352-65919546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
158, 14
               

               
Conread position:
               
14-221
               

               
Cow position:
               
chr4:23573275-23573487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
14-235
               

               
Cow position:
               
chr4:54667957-54667734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
14-282
               

               
Cow position:
               
chr4:570534-570788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
15-162
               

               
Cow position:
               
chr4:48235374-48235521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
15-165
               

               
Cow position:
               
chr4:51630392-51630542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
15-178
               

               
Cow position:
               
chr4:3340686-3340845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
15-217
               

               
Cow position:
               
chr4:34641994-34641796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
15-217
               

               
Cow position:
               
chr4:46060681-46060877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
15-226
               

               
Cow position:
               
chr4:26746219-26746427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
15-253
               

               
Cow position:
               
chr4:33612628-33612387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
15-277
               

               
Cow position:
               
chr4:35981724-35981987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
16-166
               

               
Cow position:
               
chr4:52177404-52177253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
16-217
               

               
Cow position:
               
chr4:19316261-19316069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
16-217
               

               
Cow position:
               
chr4:23526433-23526628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
16-217
               

               
Cow position:
               
chr4:31348458-31348256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
16-241
               

               
Cow position:
               
chr4:32725960-32726186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
16-241
               

               
Cow position:
               
chr4:40823379-40823156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
16-249
               

               
Cow position:
               
chr4:1237380-1237147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
16-254
               

               
Cow position:
               
chr4:36396388-36396157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
165, 10
               

               
Conread position:
               
16-254
               

               
Cow position:
               
chr4:55395504-55395734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
16-257
               

               
Cow position:
               
chr4:22249707-22249474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
137, 12
               

               
Conread position:
               
17-194
               

               
Cow position:
               
chr4:62567143-62567321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
17-201
               

               
Cow position:
               
chr4:10471960-10472140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
17-250
               

               
Cow position:
               
chr4:23445314-23445080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
143, 9
               

               
Conread position:
               
18-223
               

               
Cow position:
               
chr4:26307762-26307557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
18-249
               

               
Cow position:
               
chr4:47289808-47290043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
19-194
               

               
Cow position:
               
chr4:123462-123286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
19-217
               

               
Cow position:
               
chr4:34310716-34310517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 7
               

               
Conread position:
               
19-217
               

               
Cow position:
               
chr4:51866733-51866928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 7
               

               
Conread position:
               
20-162
               

               
Cow position:
               
chr4:61066392-61066527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 86
               

               
Conread position:
               
20-250
               

               
Cow position:
               
chr4:35940272-35940037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
24-253
               

               
Cow position:
               
chr4:19322336-19322108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
25-210
               

               
Cow position:
               
chr4:2536577-2536757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
25-217
               

               
Cow position:
               
chr4:657075-656881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 92
               

               
Conread position:
               
25-217
               

               
Cow position:
               
chr4:5630009-5629818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
25-217
               

               
Cow position:
               
chr4:12260038-12259848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
25-217
               

               
Cow position:
               
chr4:45583384-45583186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
25-226
               

               
Cow position:
               
chr4:20157669-20157472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
25-241
               

               
Cow position:
               
chr4:25879140-25879358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr4:59008625-59008397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
147, 93
               

               
Conread position:
               
25-278
               

               
Cow position:
               
chr4:27664749-27665005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 209
               

               
Conread position:
               
26-250
               

               
Cow position:
               
chr4:43909497-43909712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
26-298
               

               
Cow position:
               
chr4:49089539-49089801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 88
               

               
Conread position:
               
27-192
               

               
Cow position:
               
chr4:40410374-40410213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
27-194
               

               
Cow position:
               
chr4:41292234-41292066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
12, 134
               

               
Conread position:
               
27-214
               

               
Cow position:
               
chr4:33357677-33357864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
27-219
               

               
Cow position:
               
chr4:26549209-26549394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
27-248
               

               
Cow position:
               
chr4:45367482-45367703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
133, 16
               

               
Conread position:
               
27-252
               

               
Cow position:
               
chr4:42922100-42921883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
28-237
               

               
Cow position:
               
chr4:47730609-47730813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr4:43762788-43763047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
29-217
               

               
Cow position:
               
chr4:18577029-18576841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 88
               

               
Conread position:
               
31-268
               

               
Cow position:
               
chr4:53447916-53447684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
13, 88
               

               
Conread position:
               
32-241
               

               
Cow position:
               
chr4:44025067-44024860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 150
               

               
Conread position:
               
32-275
               

               
Cow position:
               
chr4:58881215-58880973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
140, 128
               

               
Conread position:
               
32-307
               

               
Cow position:
               
chr4:11099918-11099644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
34-217
               

               
Cow position:
               
chr4:21233118-21232941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
34-250
               

               
Cow position:
               
chr4:29291275-29291487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
37-255
               

               
Cow position:
               
chr4:65431902-65432122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
38-194
               

               
Cow position:
               
chr4:33062668-33062823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
38-209
               

               
Cow position:
               
chr4:46370568-46370740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
38-217
               

               
Cow position:
               
chr4:11897541-11897365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
134, 100
               

               
Conread position:
               
38-248
               

               
Cow position:
               
chr4:21531883-21531677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
38-277
               

               
Cow position:
               
chr4:54455586-54455351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 77
               

               
Conread position:
               
42-241
               

               
Cow position:
               
chr4:43295930-43295734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
115, 68
               

               
Conread position:
               
44-217
               

               
Cow position:
               
chr4:53999743-53999576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
128, 74
               

               
Conread position:
               
45-217
               

               
Cow position:
               
chr4:19463255-19463428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 131
               

               
Conread position:
               
46-210
               

               
Cow position:
               
chr4:41908026-41907866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 66
               

               
Conread position:
               
48-211
               

               
Cow position:
               
chr4:13693910-13693747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
48-217
               

               
Cow position:
               
chr4:43750044-43749875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
121, 125
               

               
Conread position:
               
57-255
               

               
Cow position:
               
chr4:27687700-27687897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
57-280
               

               
Cow position:
               
chr4:2602007-2602229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
115, 68
               

               
Conread position:
               
58-241
               

               
Cow position:
               
chr4:34924915-34924731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
159, 145
               

               
Conread position:
               
64-279
               

               
Cow position:
               
chr4:38935142-38935353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
100, 51
               

               
Conread position:
               
71-250
               

               
Cow position:
               
chr4:36929104-36929286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
74-238
               

               
Cow position:
               
chr4:51768906-51769068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 44
               
Show alignments to all cow chromosomes.