Cow genome map

Conread name: Ss1.1-rfhi4001b_p15.5

Conread position: 1-108
Cow position: chrX:12096492-12096386 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 1-113
Cow position: chrX:2351817-2351929 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 24

Conread position: 1-115
Cow position: chrX:29723206-29723317 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 1-119
Cow position: chrX:33205237-33205119 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 25

Conread position: 1-119
Cow position: chrX:39556062-39555943 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 25

Conread position: 1-132
Cow position: chrX:32747413-32747546 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 43, 25

Conread position: 1-142
Cow position: chrX:16722047-16721906 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 25

Conread position: 1-162
Cow position: chrX:2523975-2523813 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 27

Conread position: 1-162
Cow position: chrX:18223168-18223329 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 159, 25

Conread position: 1-163
Cow position: chrX:18293687-18293843 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 1-164
Cow position: chrX:30919637-30919474 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 25

Conread position: 1-164
Cow position: chrX:43647989-43647829 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 25

Conread position: 1-165
Cow position: chrX:3161261-3161099 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 47, 27

Conread position: 1-165
Cow position: chrX:4629936-4629770 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 25

Conread position: 1-165
Cow position: chrX:7382078-7382238 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 23

Conread position: 1-165
Cow position: chrX:14908771-14908933 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 1-165
Cow position: chrX:16531754-16531912 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 1-165
Cow position: chrX:19689973-19690136 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 1-165
Cow position: chrX:45787409-45787566 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 25

Conread position: 1-165
Cow position: chrX:46771217-46771053 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 25

Conread position: 1-172
Cow position: chrX:126547-126713 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 24

Conread position: 1-176
Cow position: chrX:42507892-42507720 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 56, 25

Conread position: 1-180
Cow position: chrX:21064041-21064216 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 25

Conread position: 1-180
Cow position: chrX:32978501-32978323 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 25

Conread position: 1-181
Cow position: chrX:21795251-21795428 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 156, 25

Conread position: 1-184
Cow position: chrX:41238608-41238436 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 1-184
Cow position: chrX:48536911-48536728 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 26

Conread position: 1-187
Cow position: chrX:27106013-27106200 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 24

Conread position: 1-193
Cow position: chrX:27498523-27498716 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 23

Conread position: 1-193
Cow position: chrX:27590285-27590092 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 25

Conread position: 1-193
Cow position: chrX:37416320-37416129 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 24

Conread position: 1-193
Cow position: chrX:38151443-38151637 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 24

Conread position: 1-193
Cow position: chrX:46606755-46606565 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 159, 25

Conread position: 1-194
Cow position: chrX:6544011-6544200 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 24

Conread position: 1-194
Cow position: chrX:21227227-21227419 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 25

Conread position: 1-194
Cow position: chrX:23583313-23583506 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 24

Conread position: 1-194
Cow position: chrX:24125316-24125124 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 159, 25

Conread position: 1-194
Cow position: chrX:31443066-31442877 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 155
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 171, 25

Conread position: 1-194
Cow position: chrX:42855163-42855359 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 43, 25

Conread position: 1-202
Cow position: chrX:23061209-23061398 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 165, 25

Conread position: 1-206
Cow position: chrX:42470182-42469986 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 38, 27

Conread position: 1-208
Cow position: chrX:754713-754921 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 42, 25

Conread position: 1-208
Cow position: chrX:5288932-5288724 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 25

Conread position: 1-208
Cow position: chrX:20582785-20582984 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 24

Conread position: 1-209
Cow position: chrX:11581689-11581904 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 37, 24

Conread position: 1-209
Cow position: chrX:22482934-22482727 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 41, 27

Conread position: 1-209
Cow position: chrX:35937317-35937121 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 25

Conread position: 1-209
Cow position: chrX:46722986-46722775 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 25

Conread position: 1-211
Cow position: chrX:2963805-2964015 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 143
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 24

Conread position: 1-211
Cow position: chrX:25458882-25458671 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 27

Conread position: 1-211
Cow position: chrX:27432164-27431953 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 27

Conread position: 1-214
Cow position: chrX:4123590-4123802 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 24

Conread position: 1-215
Cow position: chrX:15596793-15597005 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 163, 25

Conread position: 1-216
Cow position: chrX:35413385-35413587 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 26

Conread position: 1-217
Cow position: chrX:151656-151872 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 24

Conread position: 1-217
Cow position: chrX:3654359-3654575 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 27

Conread position: 1-217
Cow position: chrX:4633097-4632884 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 26

Conread position: 1-217
Cow position: chrX:5638414-5638201 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 85, 25

Conread position: 1-217
Cow position: chrX:9997578-9997368 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 163, 25

Conread position: 1-217
Cow position: chrX:10866112-10865900 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 99, 25

Conread position: 1-217
Cow position: chrX:15139790-15139578 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 41, 25

Conread position: 1-217
Cow position: chrX:18695166-18694957 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 43, 25

Conread position: 1-217
Cow position: chrX:21593038-21593255 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 37, 24

Conread position: 1-217
Cow position: chrX:21665838-21665625 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 166, 25

Conread position: 1-217
Cow position: chrX:28097880-28098079 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-217
Cow position: chrX:30143530-30143313 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 25

Conread position: 1-217
Cow position: chrX:35041974-35042192 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 24

Conread position: 1-217
Cow position: chrX:38007013-38006797 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 25

Conread position: 1-217
Cow position: chrX:38072016-38071797 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 25

Conread position: 1-217
Cow position: chrX:38094770-38094554 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 164, 25

Conread position: 1-217
Cow position: chrX:38967405-38967615 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 24

Conread position: 1-217
Cow position: chrX:42086617-42086824 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 27

Conread position: 1-219
Cow position: chrX:20151605-20151818 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 25

Conread position: 1-219
Cow position: chrX:20887889-20887677 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 159, 25

Conread position: 1-219
Cow position: chrX:28157240-28157466 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 24

Conread position: 1-220
Cow position: chrX:17271534-17271313 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 43, 27

Conread position: 1-225
Cow position: chrX:1810406-1810185 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 172, 25

Conread position: 1-225
Cow position: chrX:5376124-5376353 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 23

Conread position: 1-225
Cow position: chrX:9096422-9096648 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 159, 25

Conread position: 1-225
Cow position: chrX:14162946-14163174 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 24

Conread position: 1-225
Cow position: chrX:16711709-16711937 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 24

Conread position: 1-225
Cow position: chrX:18078155-18077927 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 25

Conread position: 1-225
Cow position: chrX:18194668-18194894 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 24

Conread position: 1-225
Cow position: chrX:20878008-20877780 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 41, 25

Conread position: 1-225
Cow position: chrX:22493762-22493990 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 24

Conread position: 1-225
Cow position: chrX:23280761-23280986 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 24

Conread position: 1-225
Cow position: chrX:23451416-23451186 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 25

Conread position: 1-225
Cow position: chrX:23572045-23571817 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 25

Conread position: 1-225
Cow position: chrX:27442800-27442577 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 25

Conread position: 1-225
Cow position: chrX:35240619-35240845 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 24

Conread position: 1-226
Cow position: chrX:13868449-13868682 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 157, 25

Conread position: 1-226
Cow position: chrX:25816141-25815929 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 43, 27

Conread position: 1-226
Cow position: chrX:30162752-30162976 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 163, 28

Conread position: 1-226
Cow position: chrX:33020241-33020463 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 215, 27

Conread position: 1-226
Cow position: chrX:35409423-35409632 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 1-226
Cow position: chrX:37843475-37843700 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 24

Conread position: 1-226
Cow position: chrX:40269231-40269467 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 27

Conread position: 1-226
Cow position: chrX:42171544-42171317 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 168, 25

Conread position: 1-226
Cow position: chrX:45414545-45414321 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 27

Conread position: 1-228
Cow position: chrX:26531713-26531944 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 38, 24

Conread position: 1-230
Cow position: chrX:10306425-10306657 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 24

Conread position: 1-235
Cow position: chrX:12018030-12018280 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 25

Conread position: 1-235
Cow position: chrX:15485873-15485636 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 25

Conread position: 1-235
Cow position: chrX:15545652-15545880 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 171, 25

Conread position: 1-235
Cow position: chrX:22538199-22537957 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 24

Conread position: 1-235
Cow position: chrX:34454424-34454653 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 25

Conread position: 1-235
Cow position: chrX:41122827-41123050 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 1-236
Cow position: chrX:40452458-40452220 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 25

Conread position: 1-237
Cow position: chrX:20021318-20021558 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 158
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-237
Cow position: chrX:21833640-21833881 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 21

Conread position: 1-237
Cow position: chrX:28847124-28846890 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 25

Conread position: 1-237
Cow position: chrX:31436235-31436466 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 43, 27

Conread position: 1-238
Cow position: chrX:7646013-7646243 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 25

Conread position: 1-238
Cow position: chrX:8925458-8925692 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 38, 25

Conread position: 1-238
Cow position: chrX:11663933-11664174 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chrX:13648029-13647793 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 25

Conread position: 1-238
Cow position: chrX:15505046-15505287 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chrX:18462220-18461980 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 25

Conread position: 1-238
Cow position: chrX:19188691-19188929 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 24

Conread position: 1-238
Cow position: chrX:19333414-19333173 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chrX:23109514-23109753 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chrX:23299709-23299950 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chrX:27422526-27422286 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 159, 23

Conread position: 1-238
Cow position: chrX:28134101-28134337 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 103, 25

Conread position: 1-238
Cow position: chrX:29226231-29226470 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chrX:29356342-29356583 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chrX:32020367-32020129 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 25

Conread position: 1-238
Cow position: chrX:35388152-35387911 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 43, 27

Conread position: 1-238
Cow position: chrX:38102689-38102451 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 57, 25

Conread position: 1-238
Cow position: chrX:38442717-38442958 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-238
Cow position: chrX:41673857-41674101 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 178

Conread position: 1-239
Cow position: chrX:35533606-35533848 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-239
Cow position: chrX:44737236-44736994 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 131, 25

Conread position: 1-241
Cow position: chrX:488245-488486 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 165, 30

Conread position: 1-241
Cow position: chrX:917615-917371 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 26

Conread position: 1-241
Cow position: chrX:1616296-1616050 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 25, 177

Conread position: 1-241
Cow position: chrX:7351054-7351295 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 25

Conread position: 1-241
Cow position: chrX:10412231-10411992 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 43, 27

Conread position: 1-241
Cow position: chrX:32743293-32743529 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 38, 24

Conread position: 1-241
Cow position: chrX:33466372-33466605 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 216, 25

Conread position: 1-241
Cow position: chrX:34502675-34502916 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 171, 28

Conread position: 1-241
Cow position: chrX:38439228-38439472 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 41, 25

Conread position: 1-242
Cow position: chrX:7497000-7497235 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 215, 27

Conread position: 1-246
Cow position: chrX:7571661-7571904 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 24

Conread position: 1-247
Cow position: chrX:7718608-7718854 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 25

Conread position: 1-247
Cow position: chrX:8899779-8900027 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 24

Conread position: 1-247
Cow position: chrX:20697851-20697609 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 43, 15

Conread position: 1-247
Cow position: chrX:40183595-40183339 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 25

Conread position: 1-247
Cow position: chrX:46424997-46424749 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 25

Conread position: 1-247
Cow position: chrX:47344049-47344294 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 24

Conread position: 1-248
Cow position: chrX:15007396-15007148 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 25

Conread position: 1-248
Cow position: chrX:42994369-42994614 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 43, 27

Conread position: 1-249
Cow position: chrX:9227229-9226976 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 43

Conread position: 1-249
Cow position: chrX:35609741-35609991 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 24

Conread position: 1-249
Cow position: chrX:47481553-47481804 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 26

Conread position: 1-250
Cow position: chrX:5872068-5872322 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 24

Conread position: 1-250
Cow position: chrX:12145850-12146102 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 167
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 7

Conread position: 1-250
Cow position: chrX:17055324-17055577 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 166
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-250
Cow position: chrX:22815696-22815949 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 24

Conread position: 1-250
Cow position: chrX:29289331-29289583 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 24

Conread position: 1-250
Cow position: chrX:31949176-31948935 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 25

Conread position: 1-250
Cow position: chrX:32010786-32011039 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 167
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-250
Cow position: chrX:40647733-40647989 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 119, 25

Conread position: 1-250
Cow position: chrX:42874733-42874987 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 162, 27

Conread position: 1-252
Cow position: chrX:9085578-9085322 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-253
Cow position: chrX:34401752-34402006 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 24

Conread position: 1-254
Cow position: chrX:8797003-8797261 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 27

Conread position: 1-254
Cow position: chrX:23564042-23563786 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 25

Conread position: 1-254
Cow position: chrX:31250147-31250393 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 215, 25

Conread position: 1-254
Cow position: chrX:34270168-34270407 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 1-254
Cow position: chrX:34441695-34441443 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 158, 25

Conread position: 1-254
Cow position: chrX:38963864-38964113 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 167, 27

Conread position: 1-255
Cow position: chrX:2467635-2467889 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 37, 10

Conread position: 1-255
Cow position: chrX:20340136-20339885 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 27

Conread position: 1-256
Cow position: chrX:38227335-38227084 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 38, 25

Conread position: 1-258
Cow position: chrX:25237933-25238181 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 171, 20

Conread position: 1-259
Cow position: chrX:42587674-42587414 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 25

Conread position: 1-260
Cow position: chrX:47211095-47210835 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 25

Conread position: 1-262
Cow position: chrX:671254-670992 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 173
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 25

Conread position: 1-262
Cow position: chrX:9572278-9572540 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 173
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-262
Cow position: chrX:9976191-9976453 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 173
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-262
Cow position: chrX:10428294-10428556 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 24

Conread position: 1-262
Cow position: chrX:11358310-11358042 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 37, 24

Conread position: 1-262
Cow position: chrX:13448025-13448287 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-262
Cow position: chrX:24509622-24509884 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-262
Cow position: chrX:45903933-45904195 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 24

Conread position: 1-271
Cow position: chrX:14924755-14925027 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 37, 25

Conread position: 1-271
Cow position: chrX:34554485-34554750 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 25

Conread position: 1-275
Cow position: chrX:42585314-42585055 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 25

Conread position: 1-277
Cow position: chrX:17725733-17726000 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 25

Conread position: 1-277
Cow position: chrX:19015197-19015462 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 24

Conread position: 1-277
Cow position: chrX:23497908-23497642 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 171, 27

Conread position: 1-278
Cow position: chrX:44835061-44834779 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 25

Conread position: 1-281
Cow position: chrX:34532286-34532557 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 168, 25

Conread position: 1-283
Cow position: chrX:14599288-14599568 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 43, 25

Conread position: 1-293
Cow position: chrX:1749754-1749465 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-293
Cow position: chrX:19495205-19494916 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 1-293
Cow position: chrX:22856787-22857082 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 192
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 37, 24

Conread position: 1-293
Cow position: chrX:23235585-23235874 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 192
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 1-293
Cow position: chrX:35803569-35803864 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 24

Conread position: 2-164
Cow position: chrX:37377512-37377348 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 2-165
Cow position: chrX:6659129-6659294 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 38, 24

Conread position: 2-165
Cow position: chrX:37299352-37299515 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 24

Conread position: 2-172
Cow position: chrX:39347030-39346860 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 26

Conread position: 2-173
Cow position: chrX:26883378-26883208 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 26

Conread position: 2-204
Cow position: chrX:26619607-26619407 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 2-208
Cow position: chrX:7806133-7806338 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 24

Conread position: 2-209
Cow position: chrX:11806261-11806054 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 26

Conread position: 2-217
Cow position: chrX:158013-157807 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 166, 24

Conread position: 2-217
Cow position: chrX:2478871-2478656 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 19

Conread position: 2-217
Cow position: chrX:17541720-17541925 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 164, 24

Conread position: 2-217
Cow position: chrX:25035631-25035412 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 157, 24

Conread position: 2-217
Cow position: chrX:30454866-30454650 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 24

Conread position: 2-217
Cow position: chrX:35273100-35273322 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 26

Conread position: 2-217
Cow position: chrX:43527259-43527477 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 35, 23

Conread position: 2-217
Cow position: chrX:46032962-46032753 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 165, 24

Conread position: 2-219
Cow position: chrX:17497852-17498053 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 23

Conread position: 2-224
Cow position: chrX:34754436-34754212 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 24

Conread position: 2-225
Cow position: chrX:31202596-31202823 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 23

Conread position: 2-226
Cow position: chrX:12309633-12309407 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 63, 24

Conread position: 2-226
Cow position: chrX:26441024-26440799 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 42, 24

Conread position: 2-235
Cow position: chrX:41743669-41743900 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 170, 24

Conread position: 2-236
Cow position: chrX:24105382-24105613 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 36, 23

Conread position: 2-238
Cow position: chrX:11655842-11656083 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 44, 26

Conread position: 2-238
Cow position: chrX:23047536-23047774 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 23

Conread position: 2-240
Cow position: chrX:15531399-15531156 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 23

Conread position: 2-248
Cow position: chrX:40557920-40557678 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 26

Conread position: 2-249
Cow position: chrX:31489268-31489519 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 42, 24

Conread position: 2-262
Cow position: chrX:15008676-15008417 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 23

Conread position: 2-276
Cow position: chrX:45404078-45403802 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 24

Conread position: 2-280
Cow position: chrX:8730835-8731122 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 36, 23

Conread position: 3-191
Cow position: chrX:28866235-28866058 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 23

Conread position: 3-217
Cow position: chrX:3653520-3653726 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 22

Conread position: 3-217
Cow position: chrX:4269311-4269094 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 23

Conread position: 3-217
Cow position: chrX:15147429-15147220 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 165, 23

Conread position: 3-241
Cow position: chrX:27446445-27446690 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 22

Conread position: 3-255
Cow position: chrX:678811-678561 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 41, 25

Conread position: 3-283
Cow position: chrX:48195284-48195004 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 36, 23

Conread position: 4-157
Cow position: chrX:32871028-32870876 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 40, 22

Conread position: 4-217
Cow position: chrX:16762529-16762736 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 24

Conread position: 4-217
Cow position: chrX:36250104-36249894 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 39, 22

Conread position: 4-218
Cow position: chrX:36778164-36778380 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 22

Conread position: 4-241
Cow position: chrX:35284375-35284614 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 22

Conread position: 4-241
Cow position: chrX:38936459-38936691 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 213, 22

Conread position: 4-243
Cow position: chrX:34238479-34238711 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 158, 24

Conread position: 4-249
Cow position: chrX:27516290-27516531 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 35, 21

Conread position: 4-277
Cow position: chrX:13912837-13913095 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 24

Conread position: 4-277
Cow position: chrX:38218473-38218739 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 213, 22

Conread position: 5-162
Cow position: chrX:29049729-29049876 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 5-163
Cow position: chrX:6607180-6607336 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 5-164
Cow position: chrX:25848678-25848834 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 23

Conread position: 5-174
Cow position: chrX:27176561-27176387 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 24

Conread position: 5-217
Cow position: chrX:9416934-9416726 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 21

Conread position: 5-217
Cow position: chrX:9635422-9635218 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 21

Conread position: 5-217
Cow position: chrX:19930416-19930618 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 5-217
Cow position: chrX:24424630-24424421 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 22

Conread position: 5-217
Cow position: chrX:30833079-30832882 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 167, 21

Conread position: 5-218
Cow position: chrX:7178668-7178866 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 160, 21

Conread position: 5-218
Cow position: chrX:28111265-28111475 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 20

Conread position: 5-226
Cow position: chrX:47757170-47756949 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 23

Conread position: 5-235
Cow position: chrX:21663068-21663293 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 21

Conread position: 5-241
Cow position: chrX:17631043-17630812 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 213, 23

Conread position: 5-241
Cow position: chrX:25337938-25338179 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 20

Conread position: 5-241
Cow position: chrX:25419402-25419163 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 161, 25

Conread position: 5-241
Cow position: chrX:39558591-39558356 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 25

Conread position: 5-254
Cow position: chrX:40788962-40789218 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 24

Conread position: 5-259
Cow position: chrX:39938758-39938512 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 208, 21

Conread position: 5-278
Cow position: chrX:22812821-22813094 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 160, 21

Conread position: 5-283
Cow position: chrX:48652968-48652690 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 53, 20

Conread position: 6-132
Cow position: chrX:33519377-33519503 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 19

Conread position: 6-162
Cow position: chrX:38642020-38642173 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 6-165
Cow position: chrX:2029150-2029308 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 6-177
Cow position: chrX:31745287-31745117 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 20

Conread position: 6-178
Cow position: chrX:10373067-10373248 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 22

Conread position: 6-180
Cow position: chrX:42499269-42499096 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 20

Conread position: 6-194
Cow position: chrX:501826-501636 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 154, 20

Conread position: 6-208
Cow position: chrX:9855060-9855263 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 22

Conread position: 6-208
Cow position: chrX:9953901-9954104 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 22

Conread position: 6-217
Cow position: chrX:7425224-7425436 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 188

Conread position: 6-217
Cow position: chrX:12249565-12249769 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 35, 20

Conread position: 6-217
Cow position: chrX:21672311-21672523 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 33, 19

Conread position: 6-217
Cow position: chrX:23514258-23514048 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 20

Conread position: 6-217
Cow position: chrX:33855473-33855266 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 23

Conread position: 6-217
Cow position: chrX:42011040-42011246 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 6-217
Cow position: chrX:43049102-43049316 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 20

Conread position: 6-217
Cow position: chrX:46044804-46045013 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 19

Conread position: 6-221
Cow position: chrX:2206784-2206579 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 20

Conread position: 6-226
Cow position: chrX:25411600-25411820 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 87, 20

Conread position: 6-226
Cow position: chrX:27394254-27394043 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 39, 20

Conread position: 6-236
Cow position: chrX:26625917-26625687 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 38, 22

Conread position: 6-238
Cow position: chrX:16416268-16416499 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 33, 20

Conread position: 6-238
Cow position: chrX:33493535-33493768 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 213, 22

Conread position: 6-238
Cow position: chrX:41403729-41403970 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 6-238
Cow position: chrX:41410277-41410518 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 6-250
Cow position: chrX:21004444-21004684 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 162, 20

Conread position: 6-252
Cow position: chrX:4044090-4043855 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 6-253
Cow position: chrX:47249028-47248780 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 20

Conread position: 6-254
Cow position: chrX:20709830-20710080 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 21

Conread position: 6-254
Cow position: chrX:41884658-41884407 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 20

Conread position: 6-254
Cow position: chrX:44053018-44053265 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 20

Conread position: 6-259
Cow position: chrX:32309866-32310116 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 201, 20

Conread position: 6-261
Cow position: chrX:24132391-24132139 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 23

Conread position: 6-276
Cow position: chrX:40826987-40826727 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 20

Conread position: 6-277
Cow position: chrX:619248-618977 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 20

Conread position: 6-277
Cow position: chrX:23970149-23970404 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 166, 22

Conread position: 6-277
Cow position: chrX:26876121-26875856 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 158, 20

Conread position: 6-283
Cow position: chrX:34543547-34543815 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 30, 19

Conread position: 7-208
Cow position: chrX:11939163-11938969 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 23

Conread position: 7-235
Cow position: chrX:45598843-45598613 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 19

Conread position: 7-255
Cow position: chrX:11674825-11675071 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 23

Conread position: 8-165
Cow position: chrX:22873160-22873317 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 18

Conread position: 8-165
Cow position: chrX:25283384-25283235 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 18

Conread position: 8-194
Cow position: chrX:11082851-11082670 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 164, 18

Conread position: 8-194
Cow position: chrX:17794747-17794927 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 17

Conread position: 8-209
Cow position: chrX:14884200-14883999 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 32, 20

Conread position: 8-214
Cow position: chrX:44731356-44731562 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 20

Conread position: 8-217
Cow position: chrX:7508901-7509109 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 20

Conread position: 8-217
Cow position: chrX:41167202-41166997 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 162, 18

Conread position: 8-226
Cow position: chrX:11073429-11073214 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 20

Conread position: 8-235
Cow position: chrX:42492748-42492529 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 155, 18

Conread position: 8-236
Cow position: chrX:40481109-40480878 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 164, 23

Conread position: 8-238
Cow position: chrX:32128218-32127997 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 220, 18

Conread position: 8-248
Cow position: chrX:17888644-17888418 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 31, 18

Conread position: 8-250
Cow position: chrX:27680165-27680398 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 164, 20

Conread position: 8-340
Cow position: chrX:10437906-10437579 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 198
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 120

Conread position: 9-174
Cow position: chrX:9837901-9838067 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 16

Conread position: 9-217
Cow position: chrX:40116188-40116388 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 157, 17

Conread position: 9-218
Cow position: chrX:37232172-37232381 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 33, 19

Conread position: 9-235
Cow position: chrX:27772193-27771975 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 160, 17

Conread position: 9-238
Cow position: chrX:12115800-12116037 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 18

Conread position: 9-248
Cow position: chrX:17662834-17662592 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 17

Conread position: 10-172
Cow position: chrX:9252414-9252255 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 18

Conread position: 10-217
Cow position: chrX:11589828-11589620 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 16

Conread position: 10-217
Cow position: chrX:20752027-20752222 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 156, 16

Conread position: 10-219
Cow position: chrX:46532745-46532533 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 152, 16

Conread position: 10-241
Cow position: chrX:30543518-30543294 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 201, 16

Conread position: 10-247
Cow position: chrX:45501912-45502146 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 29, 15

Conread position: 11-217
Cow position: chrX:13177704-13177501 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 21, 111

Conread position: 11-217
Cow position: chrX:31260865-31260660 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 17

Conread position: 11-255
Cow position: chrX:27514633-27514881 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 15

Conread position: 11-282
Cow position: chrX:22074565-22074834 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 33, 17

Conread position: 12-162
Cow position: chrX:32623349-32623498 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 12

Conread position: 12-202
Cow position: chrX:6639890-6640082 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 14

Conread position: 12-208
Cow position: chrX:36840639-36840834 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 16

Conread position: 12-211
Cow position: chrX:10302102-10302298 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 35

Conread position: 12-217
Cow position: chrX:38549214-38549414 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 27, 12

Conread position: 12-221
Cow position: chrX:4942985-4942782 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 18

Conread position: 12-241
Cow position: chrX:2383255-2383483 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 154, 14

Conread position: 12-241
Cow position: chrX:7513282-7513504 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 16

Conread position: 12-259
Cow position: chrX:33639737-33639985 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 14

Conread position: 13-217
Cow position: chrX:9201314-9201517 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 159, 13

Conread position: 13-217
Cow position: chrX:17231501-17231700 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 12

Conread position: 13-246
Cow position: chrX:36975716-36975948 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 12

Conread position: 14-217
Cow position: chrX:41198872-41199072 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 11

Conread position: 14-226
Cow position: chrX:877255-877054 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 152, 12

Conread position: 14-235
Cow position: chrX:30963104-30962885 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 12

Conread position: 14-238
Cow position: chrX:42339168-42338955 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 30, 14

Conread position: 14-241
Cow position: chrX:6278738-6278506 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 24, 14

Conread position: 14-241
Cow position: chrX:13382092-13382324 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 14

Conread position: 14-283
Cow position: chrX:47967367-47967638 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 11

Conread position: 14-283
Cow position: chrX:48010362-48010635 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 25, 11

Conread position: 15-241
Cow position: chrX:22821816-22822042 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 11

Conread position: 15-250
Cow position: chrX:14900952-14900726 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 16-217
Cow position: chrX:7721754-7721956 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 23, 10

Conread position: 16-217
Cow position: chrX:42381330-42381135 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 28, 10

Conread position: 16-226
Cow position: chrX:35542661-35542874 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 9

Conread position: 16-241
Cow position: chrX:35681115-35681335 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 10

Conread position: 16-241
Cow position: chrX:37048811-37048583 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 10

Conread position: 16-241
Cow position: chrX:37489500-37489717 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 10

Conread position: 16-277
Cow position: chrX:42247414-42247157 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 28, 10

Conread position: 17-193
Cow position: chrX:18812029-18812196 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 17-194
Cow position: chrX:1728646-1728478 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 17-217
Cow position: chrX:13265849-13265658 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 12

Conread position: 19-218
Cow position: chrX:48684450-48684258 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 10

Conread position: 19-254
Cow position: chrX:11856202-11856435 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 7

Conread position: 20-271
Cow position: chrX:21642705-21642456 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 196, 50

Conread position: 21-210
Cow position: chrX:46430087-46429898 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 101

Conread position: 24-252
Cow position: chrX:19019335-19019100 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 93

Conread position: 24-254
Cow position: chrX:1503116-1503344 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 142, 94

Conread position: 25-212
Cow position: chrX:16324185-16324002 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 135, 93

Conread position: 25-217
Cow position: chrX:16541898-16541704 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 139, 19

Conread position: 25-217
Cow position: chrX:17042468-17042660 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 93

Conread position: 25-217
Cow position: chrX:42461968-42461777 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 91

Conread position: 25-217
Cow position: chrX:46073044-46072853 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 114

Conread position: 25-254
Cow position: chrX:29509666-29509433 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 94

Conread position: 26-241
Cow position: chrX:11633457-11633674 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 93

Conread position: 26-277
Cow position: chrX:23091660-23091895 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 93

Conread position: 27-247
Cow position: chrX:36283125-36283353 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 134

Conread position: 27-249
Cow position: chrX:29602053-29601827 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 12, 32

Conread position: 29-217
Cow position: chrX:48236593-48236786 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 164

Conread position: 30-226
Cow position: chrX:37781330-37781132 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 13

Conread position: 31-235
Cow position: chrX:40567383-40567590 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 187

Conread position: 33-251
Cow position: chrX:46315593-46315373 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 139, 11

Conread position: 35-217
Cow position: chrX:9425953-9425773 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 137, 90

Conread position: 36-161
Cow position: chrX:23017792-23017917 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 38-226
Cow position: chrX:27174787-27174976 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 134, 80

Conread position: 38-254
Cow position: chrX:6234658-6234445 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 6, 73

Conread position: 38-258
Cow position: chrX:38852988-38853208 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 134, 79

Conread position: 38-260
Cow position: chrX:29542427-29542204 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 134, 80

Conread position: 38-267
Cow position: chrX:45845887-45846117 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 175, 193

Conread position: 38-268
Cow position: chrX:40035653-40035426 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 97

Conread position: 39-241
Cow position: chrX:43730422-43730228 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 78

Conread position: 39-277
Cow position: chrX:10831704-10831465 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 124, 134

Conread position: 40-254
Cow position: chrX:46587611-46587827 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 120, 77

Conread position: 42-187
Cow position: chrX:29545084-29544940 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 118, 55

Conread position: 43-248
Cow position: chrX:17908487-17908287 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 126, 64

Conread position: 44-217
Cow position: chrX:23785452-23785630 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 130, 13

Conread position: 45-253
Cow position: chrX:1499468-1499670 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 11

Conread position: 57-248
Cow position: chrX:31311836-31312030 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 160, 0

Conread position: 57-250
Cow position: chrX:36961446-36961646 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 57-255
Cow position: chrX:33000714-33000910 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 115, 81

Conread position: 58-259
Cow position: chrX:42235722-42235517 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 69

Conread position: 64-226
Cow position: chrX:32820847-32821009 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 11

Show alignments to all cow chromosomes.