Cow genome map
| Conread name: | Ss1.1-rfhi4018b_j21.5 |
| Conread position: | 1-157 |
| Cow position: | chr1:6738395-6738236 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-205 |
| Cow position: | chr1:13988583-13988784 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 114, 23 |
| Conread position: | 1-241 |
| Cow position: | chr1:48166405-48166642 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 1-277 |
| Cow position: | chr1:34702025-34702303 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 212 |
| Conread position: | 5-228 |
| Cow position: | chr1:14032541-14032326 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 6-227 |
| Cow position: | chr1:26788400-26788178 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 6-268 |
| Cow position: | chr1:94409715-94409464 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 6-432 |
| Cow position: | chr1:4911285-4911712 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 13-221 |
| Cow position: | chr1:43377620-43377837 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 26-207 |
| Cow position: | chr1:20005274-20005093 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 74, 145 |
| Conread position: | 61-258 |
| Cow position: | chr1:13256200-13256009 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 64-211 |
| Cow position: | chr1:3309751-3309898 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 42, 104 |
| Conread position: | 113-277 |
| Cow position: | chr1:66963507-66963348 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 63 |
| Conread position: | 277-432 |
| Cow position: | chr1:66963369-66963224 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 123, 9 |
| Conread position: | 284-429 |
| Cow position: | chr1:13989235-13989380 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 284-432 |
| Cow position: | chr1:34702288-34702436 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 83 |
| Conread position: | 286-432 |
| Cow position: | chr1:5654683-5654827 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 287-432 |
| Cow position: | chr1:26788155-26788009 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.