Cow genome map
| Conread name: | Ss1.1-rfhi4018b_j21.5 |
| Conread position: | 3-272 |
| Cow position: | chr10:1789142-1788879 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 69, 152 |
| Conread position: | 5-200 |
| Cow position: | chr10:20749569-20749759 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 6-184 |
| Cow position: | chr10:14386822-14386648 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 6-202 |
| Cow position: | chr10:61435733-61435929 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 122 |
| Conread position: | 6-220 |
| Cow position: | chr10:64093094-64093307 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 141, 19 |
| Conread position: | 7-232 |
| Cow position: | chr10:30940992-30940760 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 130, 18 |
| Conread position: | 20-212 |
| Cow position: | chr10:55510690-55510500 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 156 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 20-219 |
| Cow position: | chr10:27248740-27248941 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 137 |
| Conread position: | 50-276 |
| Cow position: | chr10:9500004-9499785 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 58, 7 |
| Conread position: | 125-264 |
| Cow position: | chr10:29323115-29323254 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 105, 75 |
| Conread position: | 280-432 |
| Cow position: | chr10:61435962-61436115 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 67 |
| Conread position: | 284-431 |
| Cow position: | chr10:64963437-64963288 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 284-432 |
| Cow position: | chr10:9499799-9499651 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 53 |
| Conread position: | 287-432 |
| Cow position: | chr10:29323251-29323395 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.