Cow genome map
| Conread name: | Ss1.1-rfhi4018b_j21.5 |
| Conread position: | 1-136 |
| Cow position: | chr12:14353032-14353166 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-210 |
| Cow position: | chr12:4197872-4197663 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 100, 43 |
| Conread position: | 1-232 |
| Cow position: | chr12:26212765-26213003 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 1-269 |
| Cow position: | chr12:46032843-46033090 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 6-136 |
| Cow position: | chr12:13592188-13592060 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 6-233 |
| Cow position: | chr12:5155978-5156214 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 6-258 |
| Cow position: | chr12:5719795-5720053 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 96, 39 |
| Conread position: | 7-277 |
| Cow position: | chr12:6466650-6466913 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 53 |
| Conread position: | 8-277 |
| Cow position: | chr12:25049828-25049559 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 48, 156 |
| Conread position: | 269-432 |
| Cow position: | chr12:46033181-46033346 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 277-432 |
| Cow position: | chr12:6466892-6467046 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 284-430 |
| Cow position: | chr12:25049574-25049428 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 284-432 |
| Cow position: | chr12:2262553-2262710 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 289-430 |
| Cow position: | chr12:48470248-48470389 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-432 |
| Cow position: | chr12:5720062-5720208 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.