Cow genome map


           Conread name:
           Ss1.1-rfhi4018b_j21.5
        

               Conread position:
               1-208
               

               Cow position:
               chr14:12570156-12569956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               9, 125
               

               Conread position:
               3-208
               

               Cow position:
               chr14:26623145-26623351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               6-221
               

               Cow position:
               chr14:23311908-23312129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               34, 19
               

               Conread position:
               6-233
               

               Cow position:
               chr14:29706914-29706693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               13-210
               

               Cow position:
               chr14:36278847-36279044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-275
               

               Cow position:
               chr14:16521345-16521177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               159-432
               

               Cow position:
               chr14:35404200-35403937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               222, 64
               

               Conread position:
               287-431
               

               Cow position:
               chr14:29706680-29706537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               28, 123
               
Show alignments to all cow chromosomes.