Cow genome map
| Conread name: | Ss1.1-rfhi4018b_j21.5 |
| Conread position: | 1-432 |
| Cow position: | chr16:5697708-5698132 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 5-213 |
| Cow position: | chr16:45162588-45162376 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 132, 58 |
| Conread position: | 6-162 |
| Cow position: | chr16:33847565-33847721 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 46, 89 |
| Conread position: | 6-220 |
| Cow position: | chr16:54636264-54636484 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 6-225 |
| Cow position: | chr16:5786097-5786307 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 7-272 |
| Cow position: | chr16:26917956-26918204 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-275 |
| Cow position: | chr16:48002587-48002846 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-277 |
| Cow position: | chr16:43121236-43121488 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 95-244 |
| Cow position: | chr16:40435978-40435829 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 83 |
| Conread position: | 285-432 |
| Cow position: | chr16:27160411-27160556 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 94, 79 |
| Conread position: | 285-432 |
| Cow position: | chr16:48002834-48002983 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 287-425 |
| Cow position: | chr16:29771755-29771615 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 73 |
| Conread position: | 292-432 |
| Cow position: | chr16:51080472-51080331 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 294-432 |
| Cow position: | chr16:31693955-31694093 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 24 |
| Conread position: | 306-432 |
| Cow position: | chr16:26918204-26918332 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.