Cow genome map


           Conread name:
           Ss1.1-rfhi4018b_j21.5
        

               Conread position:
               1-432
               

               Cow position:
               chr18:42462933-42462535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               300
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               401, 38
               

               Conread position:
               6-134
               

               Cow position:
               chr18:881646-881775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               6-210
               

               Cow position:
               chr18:50018077-50018271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               98, 51
               

               Conread position:
               6-401
               

               Cow position:
               chr18:49892265-49891871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 53
               

               Conread position:
               48-277
               

               Cow position:
               chr18:23622793-23622566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               14, 109
               

               Conread position:
               287-422
               

               Cow position:
               chr18:50018311-50018445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               300-432
               

               Cow position:
               chr18:15611087-15610954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               15, 46
               
Show alignments to all cow chromosomes.