Cow genome map


           Conread name:
           Ss1.1-rfhi4018b_j21.5
        

               Conread position:
               1-229
               

               Cow position:
               chr20:33887632-33887406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               6-221
               

               Cow position:
               chr20:33131500-33131719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               6-300
               

               Cow position:
               chr20:31731384-31731112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               288, 18
               

               Conread position:
               7-432
               

               Cow position:
               chr20:3315547-3315950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               285
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               171, 51
               

               Conread position:
               12-207
               

               Cow position:
               chr20:41897990-41897801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               92, 44
               

               Conread position:
               58-418
               

               Cow position:
               chr20:7271017-7271385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               81, 146
               

               Conread position:
               277-429
               

               Cow position:
               chr20:8498382-8498537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 9
               

               Conread position:
               277-432
               

               Cow position:
               chr20:4001204-4001047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               277-432
               

               Cow position:
               chr20:27924091-27923942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               296-431
               

               Cow position:
               chr20:41897751-41897614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               7, 54
               
Show alignments to all cow chromosomes.