Cow genome map


           Conread name:
           Ss1.1-rfhi4018b_j21.5
        

               Conread position:
               5-275
               

               Cow position:
               chr22:25083911-25084165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               6-195
               

               Cow position:
               chr22:10259189-10259377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               94, 51
               

               Conread position:
               6-207
               

               Cow position:
               chr22:27388623-27388425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               6-271
               

               Cow position:
               chr22:6179432-6179171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               98, 19
               

               Conread position:
               13-277
               

               Cow position:
               chr22:19577024-19577302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               10, 121
               

               Conread position:
               28-258
               

               Cow position:
               chr22:20060285-20060511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               30, 34
               

               Conread position:
               45-275
               

               Cow position:
               chr22:22489534-22489770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 7
               

               Conread position:
               277-432
               

               Cow position:
               chr22:19577281-19577438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               41, 8
               

               Conread position:
               288-432
               

               Cow position:
               chr22:27388387-27388241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               33, 67
               

               Conread position:
               292-432
               

               Cow position:
               chr22:27150145-27150004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 0
               
Show alignments to all cow chromosomes.