Cow genome map


           Conread name:
           Ss1.1-rfhi4018b_j21.5
        

               Conread position:
               1-210
               

               Cow position:
               chr26:22774271-22774476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 85
               

               Conread position:
               1-246
               

               Cow position:
               chr26:28425770-28425525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               12, 141
               

               Conread position:
               6-221
               

               Cow position:
               chr26:28457761-28457985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               6-277
               

               Cow position:
               chr26:26976056-26975803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               18-186
               

               Cow position:
               chr26:29853025-29853191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               49-244
               

               Cow position:
               chr26:2413049-2413247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 140
               

               Conread position:
               283-432
               

               Cow position:
               chr26:26975819-26975670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 84
               

               Conread position:
               285-432
               

               Cow position:
               chr26:28425525-28425381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 85
               

               Conread position:
               286-432
               

               Cow position:
               chr26:22774515-22774663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 145
               

               Conread position:
               307-432
               

               Cow position:
               chr26:29853374-29853502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 0
               
Show alignments to all cow chromosomes.