Cow genome map


           Conread name:
           Ss1.1-rfhi4018b_j21.5
        

               Conread position:
               1-191
               

               Cow position:
               chr3:51412457-51412277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr3:69229216-69229021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               107, 37
               

               Conread position:
               1-258
               

               Cow position:
               chr3:48580604-48580858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               2-275
               

               Cow position:
               chr3:84859858-84860122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               8, 27
               

               Conread position:
               5-143
               

               Cow position:
               chr3:15059015-15058876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 111
               

               Conread position:
               17-191
               

               Cow position:
               chr3:53578023-53578196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               142
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               99-430
               

               Cow position:
               chr3:51045000-51044680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               198, 55
               

               Conread position:
               277-432
               

               Cow position:
               chr3:69228986-69228832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 8
               

               Conread position:
               286-430
               

               Cow position:
               chr3:51412225-51412079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               32, 0
               
Show alignments to all cow chromosomes.