Cow genome map


           Conread name:
           Ss1.1-rfhi4018b_j21.5
        

               Conread position:
               1-233
               

               Cow position:
               chr7:12454574-12454336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               2-279
               

               Cow position:
               chr7:44189822-44189527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               87, 57
               

               Conread position:
               6-210
               

               Cow position:
               chr7:23418829-23418625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 162
               

               Conread position:
               6-219
               

               Cow position:
               chr7:20870914-20871126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               61-432
               

               Cow position:
               chr7:65901354-65900998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               122, 168
               

               Conread position:
               259-432
               

               Cow position:
               chr7:23418625-23418455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               285-430
               

               Cow position:
               chr7:22491276-22491130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 0
               
Show alignments to all cow chromosomes.