Cow genome map


           Conread name:
           Ss1.1-rfhi4018b_j21.5
        

               Conread position:
               1-277
               

               Cow position:
               chr8:40296076-40295792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               53, 43
               

               Conread position:
               3-277
               

               Cow position:
               chr8:3109241-3108970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 168
               

               Conread position:
               5-244
               

               Cow position:
               chr8:10203373-10203135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               22, 15
               

               Conread position:
               6-279
               

               Cow position:
               chr8:32341271-32341013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               28-431
               

               Cow position:
               chr8:35930598-35930995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               287
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               49-432
               

               Cow position:
               chr8:51943162-51943523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               159-432
               

               Cow position:
               chr8:47016596-47016328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               107, 77
               
Show alignments to all cow chromosomes.