Cow genome map


           Conread name:
           Ss1.1-rfhi4018b_j21.5
        

               Conread position:
               6-190
               

               Cow position:
               chrX:36850633-36850446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               6-218
               

               Cow position:
               chrX:15265529-15265738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               31, 14
               

               Conread position:
               7-277
               

               Cow position:
               chrX:36875482-36875741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               45-207
               

               Cow position:
               chrX:34705798-34705637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               59, 14
               

               Conread position:
               263-432
               

               Cow position:
               chrX:34705617-34705448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               272-431
               

               Cow position:
               chrX:36875715-36875875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               284-430
               

               Cow position:
               chrX:25951544-25951690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               116, 36
               
Show alignments to all cow chromosomes.