Cow genome map


           Conread name:
           Ss1.1-rfhi4019b_h13.5
        

               Conread position:
               1-264
               

               Cow position:
               chr11:74554665-74554402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-235
               

               Cow position:
               chr11:74554412-74554179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               121, 134
               

               Conread position:
               2-264
               

               Cow position:
               chr11:74554496-74554234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               2-264
               

               Cow position:
               chr11:74554748-74554486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               chr11:74554916-74554654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               2-264
               

               Cow position:
               chr11:74555000-74554738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               chr11:74555084-74554822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               5-264
               

               Cow position:
               chr11:74554577-74554318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.