Cow genome map

Conread name: Ss1.1-rfhi4019b_h13.5

Conread position: 1-261
Cow position: chr17:22452023-22451763 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 171
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 189, 202

Conread position: 1-264
Cow position: chr17:22452359-22452096 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-264
Cow position: chr17:22473356-22473619 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 173
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 101, 92

Conread position: 1-264
Cow position: chr17:22552662-22552399 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 13

Conread position: 2-249
Cow position: chr17:22551737-22551490 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 12

Conread position: 2-250
Cow position: chr17:22552157-22551909 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 161
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-260
Cow position: chr17:22552241-22551983 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 12

Conread position: 2-260
Cow position: chr17:22589659-22589401 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 109, 97

Conread position: 2-264
Cow position: chr17:22452106-22451844 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 2-264
Cow position: chr17:22452190-22451928 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 22, 12

Conread position: 2-264
Cow position: chr17:22473609-22473871 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 97

Conread position: 2-264
Cow position: chr17:22499288-22499026 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 168
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-264
Cow position: chr17:22499372-22499110 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 2-264
Cow position: chr17:22551821-22551559 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 7, 15

Conread position: 2-264
Cow position: chr17:22552073-22551811 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 173
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 2-264
Cow position: chr17:22552493-22552231 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 2-264
Cow position: chr17:22552577-22552315 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 172
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 2-264
Cow position: chr17:22552829-22552567 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 168
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-264
Cow position: chr17:22553081-22552819 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-264
Cow position: chr17:22589911-22589649 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 43

Conread position: 2-264
Cow position: chr17:22589995-22589733 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-264
Cow position: chr17:22590079-22589817 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-264
Cow position: chr17:41440596-41440334 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 169
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-264
Cow position: chr17:41441016-41440754 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 130, 136

Conread position: 3-263
Cow position: chr17:22552996-22552736 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 124, 119

Conread position: 3-264
Cow position: chr17:22590162-22589901 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 171
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 7

Conread position: 5-241
Cow position: chr17:22473696-22473933 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 228, 0

Conread position: 5-250
Cow position: chr17:41440509-41440264 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-264
Cow position: chr17:22452271-22452012 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-264
Cow position: chr17:22473528-22473787 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-264
Cow position: chr17:22552322-22552063 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 10

Conread position: 5-264
Cow position: chr17:22552406-22552147 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 106, 94

Conread position: 5-264
Cow position: chr17:22552910-22552651 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 28-245
Cow position: chr17:22498842-22498625 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 101, 96

Conread position: 29-264
Cow position: chr17:22590304-22590069 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 70

Conread position: 35-264
Cow position: chr17:22452409-22452180 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 70

Conread position: 35-264
Cow position: chr17:22551872-22551643 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 52-264
Cow position: chr17:22473242-22473451 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 60-249
Cow position: chr17:22499398-22499209 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.