Cow genome map


           Conread name:
           Ss1.1-rfhi4019b_h13.5
        

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               123, 106
               

               Conread position:
               2-231
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 43
               

               Conread position:
               2-236
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-239
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               2-258
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-258
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-258
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               235, 0
               

               Conread position:
               2-260
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 27
               

               Conread position:
               2-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-262
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               188, 192
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               106, 94
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               190, 42
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               220, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               81, 85
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               49, 13
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               109, 94
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               109, 103
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               42, 8
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               3-231
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               189, 194
               

               Conread position:
               3-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               126, 118
               

               Conread position:
               4-264
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               119, 124
               

               Conread position:
               4-264
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               119, 124
               

               Conread position:
               4-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 10
               

               Conread position:
               5-249
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               5-250
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               5-264
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-264
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               189, 193
               

               Conread position:
               5-264
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 40
               

               Conread position:
               5-264
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               5-264
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-264
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               109, 10
               

               Conread position:
               8-264
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               10-264
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 132
               

               Conread position:
               23-264
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               26-264
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               33-264
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               43-262
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               113, 82
               

               Conread position:
               43-264
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               50-264
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               62-264
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.