Cow genome map


           Conread name:
           Ss1.1-rfhi4019b_h13.5
        

               Conread position:
               1-227
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               122, 127
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               49, 56
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 41
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-236
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               2-236
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               107, 97
               

               Conread position:
               2-237
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               2-241
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 14
               

               Conread position:
               2-260
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               38, 43
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               83, 88
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 127
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               185, 175
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               187, 195
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               122, 127
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               25, 12
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               122, 127
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               23, 12
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               100, 91
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               100, 90
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-219
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               3-236
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               51, 39
               

               Conread position:
               3-264
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 14
               

               Conread position:
               4-262
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-261
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               35, 40
               

               Conread position:
               5-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               5, 12
               

               Conread position:
               5-264
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               5, 12
               

               Conread position:
               17-264
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-264
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               80, 87
               

               Conread position:
               50-264
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               143, 128
               

               Conread position:
               50-264
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 74
               

               Conread position:
               55-264
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               136, 150
               

               Conread position:
               74-264
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.