Cow genome map


           Conread name:
           Ss1.1-rfhi4019b_h13.5
        

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               114, 118
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               1-249
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-259
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               122, 127
               

               Conread position:
               1-261
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               23, 13
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-226
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               93, 81
               

               Conread position:
               2-230
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               2-234
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-249
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               16, 12
               

               Conread position:
               2-257
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               2-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-263
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 43
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               183, 175
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               24, 12
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               127, 115
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               25, 14
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               131, 139
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               122, 127
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 14
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 12
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               20, 12
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               100, 91
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               120, 127
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               131, 139
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               201, 193
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               175, 192
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               38, 43
               

               Conread position:
               4-264
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 68
               

               Conread position:
               4-264
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-236
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               5-263
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               5-264
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               5-264
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               19, 8
               

               Conread position:
               35-258
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               59-263
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               59-264
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               65-264
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               65-264
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               163, 172
               

               Conread position:
               74-264
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               80-264
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               142-264
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.