Cow genome map
| Conread name: | Ss1.1-rfhi4019b_h13.5 |
| Conread position: | 2-228 |
| Cow position: | chr24:17070816-17071042 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 2-234 |
| Cow position: | chr24:17077820-17077588 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 2-239 |
| Cow position: | chr24:17077736-17077499 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-249 |
| Cow position: | chr24:17035685-17035438 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-258 |
| Cow position: | chr24:17035601-17035345 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-264 |
| Cow position: | chr24:17013185-17013447 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 108, 94 |
| Conread position: | 2-264 |
| Cow position: | chr24:17070648-17070910 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 2-264 |
| Cow position: | chr24:17070732-17070994 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 2-264 |
| Cow position: | chr24:17077904-17077642 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 102, 93 |
| Conread position: | 2-264 |
| Cow position: | chr24:17077988-17077726 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 3-264 |
| Cow position: | chr24:17078071-17077810 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-259 |
| Cow position: | chr24:17036270-17036016 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 97, 78 |
| Conread position: | 5-264 |
| Cow position: | chr24:17036102-17035843 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-264 |
| Cow position: | chr24:17036188-17035927 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 5-264 |
| Cow position: | chr24:17036522-17036263 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-264 |
| Cow position: | chr24:17078153-17077894 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-263 |
| Cow position: | chr24:17070487-17070741 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 9-240 |
| Cow position: | chr24:17035427-17035195 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 11-236 |
| Cow position: | chr24:17036012-17035787 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 180, 185 |
| Conread position: | 11-236 |
| Cow position: | chr24:17036432-17036207 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-264 |
| Cow position: | chr24:17035340-17035087 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 180, 185 |
| Conread position: | 11-264 |
| Cow position: | chr24:17035508-17035255 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 73, 79 |
| Conread position: | 17-240 |
| Cow position: | chr24:17035754-17035531 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 174, 179 |
| Conread position: | 33-259 |
| Cow position: | chr24:17035822-17035596 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.