Cow genome map
| Conread name: | Ss1.1-rfhi4019b_h13.5 |
| Conread position: | 1-264 |
| Cow position: | chr3:68027112-68027375 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 122, 127 |
| Conread position: | 2-226 |
| Cow position: | chr3:68027533-68027757 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 12 |
| Conread position: | 2-228 |
| Cow position: | chr3:62721800-62721574 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-250 |
| Cow position: | chr3:68045958-68046206 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 126, 119 |
| Conread position: | 2-264 |
| Cow position: | chr3:20194911-20195173 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-264 |
| Cow position: | chr3:62722052-62721790 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 186, 176 |
| Conread position: | 2-264 |
| Cow position: | chr3:62722136-62721874 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 16, 12 |
| Conread position: | 2-264 |
| Cow position: | chr3:62722220-62721958 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 106, 91 |
| Conread position: | 2-264 |
| Cow position: | chr3:62722304-62722042 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 110, 98 |
| Conread position: | 2-264 |
| Cow position: | chr3:68045706-68045968 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 122, 127 |
| Conread position: | 3-264 |
| Cow position: | chr3:68045875-68046136 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 4-241 |
| Cow position: | chr3:68045624-68045861 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-264 |
| Cow position: | chr3:62742718-62742977 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 169, 28 |
| Conread position: | 4-264 |
| Cow position: | chr3:68027031-68027291 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-264 |
| Cow position: | chr3:68046044-68046304 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-264 |
| Cow position: | chr3:68027469-68027711 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 86, 71 |
| Conread position: | 36-255 |
| Cow position: | chr3:62742250-62742468 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 44-264 |
| Cow position: | chr3:62721926-62721706 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 70, 51 |
Show alignments to all cow chromosomes.