Cow genome map
| Conread name: | Ss1.1-rfhi4019b_h13.5 |
| Conread position: | 1-264 |
| Cow position: | chrX:25325063-25324800 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-244 |
| Cow position: | chrX:29044903-29044661 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-260 |
| Cow position: | chrX:29045722-29045464 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-264 |
| Cow position: | chrX:25309743-25310005 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 2-264 |
| Cow position: | chrX:25309911-25310173 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 2-264 |
| Cow position: | chrX:25309995-25310257 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 120, 103 |
| Conread position: | 2-264 |
| Cow position: | chrX:25324558-25324296 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 2-264 |
| Cow position: | chrX:25324642-25324380 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 93 |
| Conread position: | 2-264 |
| Cow position: | chrX:25324726-25324464 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-264 |
| Cow position: | chrX:25324978-25324716 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 2-264 |
| Cow position: | chrX:25325230-25324968 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-264 |
| Cow position: | chrX:25325398-25325136 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-264 |
| Cow position: | chrX:25325482-25325220 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-264 |
| Cow position: | chrX:25325565-25325304 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-264 |
| Cow position: | chrX:29045238-29044977 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 127, 120 |
| Conread position: | 4-264 |
| Cow position: | chrX:29045153-29044893 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 5-261 |
| Cow position: | chrX:14181198-14180942 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-264 |
| Cow position: | chrX:13826924-13826665 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 105, 115 |
| Conread position: | 5-264 |
| Cow position: | chrX:25324891-25324632 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-264 |
| Cow position: | chrX:29045068-29044809 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 8-264 |
| Cow position: | chrX:29045316-29045061 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 38-264 |
| Cow position: | chrX:29045769-29045544 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 42-264 |
| Cow position: | chrX:25309699-25309921 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 58 |
| Conread position: | 43-264 |
| Cow position: | chrX:25310204-25310425 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 63, 75 |
| Conread position: | 44-264 |
| Cow position: | chrX:25310289-25310509 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.