Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rfhi4027b_a6.5
        

               Conread position:
               48-204
               

               Cow position:
               chr11:68909291-68909444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               67, 11
               

               Conread position:
               61-420
               

               Cow position:
               chr11:64009961-64009586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               62-441
               

               Cow position:
               chr11:33414464-33414085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               75-282
               

               Cow position:
               chr11:77554438-77554645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 103
               

               Conread position:
               82-358
               

               Cow position:
               chr11:47837528-47837246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               107, 31
               

               Conread position:
               87-264
               

               Cow position:
               chr11:50629477-50629299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               105, 43
               

               Conread position:
               87-280
               

               Cow position:
               chr11:19147938-19148130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               114, 7
               

               Conread position:
               87-441
               

               Cow position:
               chr11:40459308-40458961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               119, 24
               

               Conread position:
               88-282
               

               Cow position:
               chr11:64781300-64781091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               88-284
               

               Cow position:
               chr11:80370320-80370117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               111, 160
               

               Conread position:
               88-388
               

               Cow position:
               chr11:29308788-29308479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 16
               

               Conread position:
               89-286
               

               Cow position:
               chr11:10563212-10563009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               89-300
               

               Cow position:
               chr11:68883926-68883706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               23, 209
               

               Conread position:
               89-385
               

               Cow position:
               chr11:7385636-7385339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               102, 17
               

               Conread position:
               89-402
               

               Cow position:
               chr11:39060400-39060716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               103, 140
               

               Conread position:
               89-420
               

               Cow position:
               chr11:42835750-42836092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               118, 22
               

               Conread position:
               90-269
               

               Cow position:
               chr11:82732951-82733132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 34
               

               Conread position:
               90-284
               

               Cow position:
               chr11:32126819-32126614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               90-331
               

               Cow position:
               chr11:25119728-25119977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 247
               

               Conread position:
               90-341
               

               Cow position:
               chr11:35724174-35723913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               114, 214
               

               Conread position:
               90-420
               

               Cow position:
               chr11:67804940-67804619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               87, 14
               

               Conread position:
               90-420
               

               Cow position:
               chr11:70756683-70756348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               11, 202
               

               Conread position:
               91-274
               

               Cow position:
               chr11:25968646-25968842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               8, 172
               

               Conread position:
               91-277
               

               Cow position:
               chr11:38223590-38223778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               110, 133
               

               Conread position:
               91-286
               

               Cow position:
               chr11:5231446-5231646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               111, 19
               

               Conread position:
               91-286
               

               Cow position:
               chr11:33971595-33971803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               91-296
               

               Cow position:
               chr11:17517605-17517390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 55
               

               Conread position:
               91-301
               

               Cow position:
               chr11:77017429-77017226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               191, 20
               

               Conread position:
               91-329
               

               Cow position:
               chr11:28078695-28078458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               20, 167
               

               Conread position:
               91-332
               

               Cow position:
               chr11:56311398-56311644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               116, 13
               

               Conread position:
               91-378
               

               Cow position:
               chr11:30370302-30370016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               106, 36
               

               Conread position:
               91-403
               

               Cow position:
               chr11:5217257-5217582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               104, 85
               

               Conread position:
               91-404
               

               Cow position:
               chr11:63919863-63920166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 73
               

               Conread position:
               91-410
               

               Cow position:
               chr11:75285553-75285890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               105, 258
               

               Conread position:
               91-420
               

               Cow position:
               chr11:52297020-52297354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               5, 21
               

               Conread position:
               91-439
               

               Cow position:
               chr11:2084351-2083990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 258
               

               Conread position:
               91-439
               

               Cow position:
               chr11:26143899-26144245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 26
               

               Conread position:
               91-441
               

               Cow position:
               chr11:30638751-30639094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               106, 19
               

               Conread position:
               91-441
               

               Cow position:
               chr11:53773887-53773528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               254
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               25, 246
               

               Conread position:
               92-205
               

               Cow position:
               chr11:23278951-23279065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               92-205
               

               Cow position:
               chr11:49192253-49192366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-258
               

               Cow position:
               chr11:51683416-51683244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               113, 18
               

               Conread position:
               92-284
               

               Cow position:
               chr11:49396323-49396523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               92-288
               

               Cow position:
               chr11:62567034-62566841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               14, 122
               

               Conread position:
               92-289
               

               Cow position:
               chr11:35544288-35544084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               115, 193
               

               Conread position:
               92-317
               

               Cow position:
               chr11:6395954-6395722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               92-377
               

               Cow position:
               chr11:35536778-35536497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 49
               

               Conread position:
               92-420
               

               Cow position:
               chr11:7273036-7273362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               196, 53
               

               Conread position:
               92-420
               

               Cow position:
               chr11:41549136-41549469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               93, 26
               

               Conread position:
               93-190
               

               Cow position:
               chr11:1091712-1091810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               93-256
               

               Cow position:
               chr11:2937473-2937633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               93-280
               

               Cow position:
               chr11:36136310-36136116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               93-282
               

               Cow position:
               chr11:6319925-6320128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               93-284
               

               Cow position:
               chr11:7571824-7571627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               93-292
               

               Cow position:
               chr11:12555103-12555313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               93-300
               

               Cow position:
               chr11:46884583-46884357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               93-327
               

               Cow position:
               chr11:62889688-62889937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               93-330
               

               Cow position:
               chr11:48512342-48512118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               189, 15
               

               Conread position:
               93-383
               

               Cow position:
               chr11:67911966-67912249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               189, 17
               

               Conread position:
               93-396
               

               Cow position:
               chr11:73573848-73573537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 37
               

               Conread position:
               93-403
               

               Cow position:
               chr11:46747661-46747980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               114, 14
               

               Conread position:
               93-420
               

               Cow position:
               chr11:39462822-39462496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 251
               

               Conread position:
               93-420
               

               Cow position:
               chr11:58588530-58588214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               93-422
               

               Cow position:
               chr11:23271805-23272136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               95, 68
               

               Conread position:
               93-429
               

               Cow position:
               chr11:53817056-53816718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 207
               

               Conread position:
               93-440
               

               Cow position:
               chr11:27907973-27907640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               23, 136
               

               Conread position:
               93-441
               

               Cow position:
               chr11:32254015-32254367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 256
               

               Conread position:
               93-441
               

               Cow position:
               chr11:68913345-68912986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 250
               

               Conread position:
               94-281
               

               Cow position:
               chr11:17369726-17369537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               108, 99
               

               Conread position:
               94-282
               

               Cow position:
               chr11:37335904-37336084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               94-286
               

               Cow position:
               chr11:10066547-10066349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               109, 16
               

               Conread position:
               94-286
               

               Cow position:
               chr11:33374166-33373966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               104, 62
               

               Conread position:
               94-308
               

               Cow position:
               chr11:43914491-43914267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               110, 11
               

               Conread position:
               94-390
               

               Cow position:
               chr11:8584513-8584217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               190, 16
               

               Conread position:
               94-408
               

               Cow position:
               chr11:66188124-66188444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               109, 12
               

               Conread position:
               94-428
               

               Cow position:
               chr11:10095540-10095206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               104, 16
               

               Conread position:
               94-428
               

               Cow position:
               chr11:77546596-77546277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               188, 51
               

               Conread position:
               94-441
               

               Cow position:
               chr11:45619553-45619201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               17, 280
               

               Conread position:
               95-230
               

               Cow position:
               chr11:54130228-54130093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 16
               

               Conread position:
               95-264
               

               Cow position:
               chr11:32800828-32800648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               95-282
               

               Cow position:
               chr11:57331984-57331806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 84
               

               Conread position:
               95-284
               

               Cow position:
               chr11:9699056-9699242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               95-284
               

               Cow position:
               chr11:33368270-33368085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               95-298
               

               Cow position:
               chr11:6094203-6094413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 143
               

               Conread position:
               95-298
               

               Cow position:
               chr11:15366776-15366983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 198
               

               Conread position:
               95-298
               

               Cow position:
               chr11:36521081-36520860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               95-299
               

               Cow position:
               chr11:87171876-87172092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               20, 80
               

               Conread position:
               95-300
               

               Cow position:
               chr11:18119701-18119485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               111, 54
               

               Conread position:
               95-306
               

               Cow position:
               chr11:3797902-3797695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               187, 20
               

               Conread position:
               95-308
               

               Cow position:
               chr11:47784979-47784750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               95-309
               

               Cow position:
               chr11:62620575-62620356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 200
               

               Conread position:
               95-316
               

               Cow position:
               chr11:9237649-9237879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               111, 59
               

               Conread position:
               95-332
               

               Cow position:
               chr11:36112613-36112374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               99, 41
               

               Conread position:
               95-335
               

               Cow position:
               chr11:32710717-32710463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 242
               

               Conread position:
               95-338
               

               Cow position:
               chr11:17559313-17559080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               95-400
               

               Cow position:
               chr11:31875293-31874979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               110, 253
               

               Conread position:
               95-402
               

               Cow position:
               chr11:42067063-42066745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               86, 214
               

               Conread position:
               95-403
               

               Cow position:
               chr11:24438020-24438340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               109, 127
               

               Conread position:
               95-417
               

               Cow position:
               chr11:52690323-52690652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 62
               

               Conread position:
               95-420
               

               Cow position:
               chr11:40395636-40395305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               26, 248
               

               Conread position:
               95-420
               

               Cow position:
               chr11:45631582-45631895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               129, 21
               

               Conread position:
               95-420
               

               Cow position:
               chr11:63998891-63999223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               103, 202
               

               Conread position:
               95-424
               

               Cow position:
               chr11:27747114-27746785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               93, 15
               

               Conread position:
               95-428
               

               Cow position:
               chr11:42083652-42083337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               101, 76
               

               Conread position:
               95-428
               

               Cow position:
               chr11:64029068-64029398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               110, 152
               

               Conread position:
               95-428
               

               Cow position:
               chr11:75874573-75874893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               187, 83
               

               Conread position:
               95-441
               

               Cow position:
               chr11:19591797-19592143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 48
               

               Conread position:
               96-204
               

               Cow position:
               chr11:15744886-15744995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               96-204
               

               Cow position:
               chr11:21637402-21637510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-204
               

               Cow position:
               chr11:28092649-28092541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-204
               

               Cow position:
               chr11:41295025-41295132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               96-205
               

               Cow position:
               chr11:72568267-72568377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               96-248
               

               Cow position:
               chr11:21322307-21322456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               96-252
               

               Cow position:
               chr11:24551587-24551425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               110, 12
               

               Conread position:
               96-257
               

               Cow position:
               chr11:33271627-33271460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               96-260
               

               Cow position:
               chr11:15591282-15591448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               96-261
               

               Cow position:
               chr11:62102246-62102422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               96-261
               

               Cow position:
               chr11:75915184-75915019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-266
               

               Cow position:
               chr11:36847368-36847188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               96-274
               

               Cow position:
               chr11:26057447-26057638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               96-276
               

               Cow position:
               chr11:68570183-68570370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               69, 61
               

               Conread position:
               96-281
               

               Cow position:
               chr11:6581032-6580838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               96-284
               

               Cow position:
               chr11:19578823-19579013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 60
               

               Conread position:
               96-284
               

               Cow position:
               chr11:44620153-44619957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               96-284
               

               Cow position:
               chr11:79666064-79666259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               111, 49
               

               Conread position:
               96-286
               

               Cow position:
               chr11:64103853-64104046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               96-286
               

               Cow position:
               chr11:81065852-81066049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               96-291
               

               Cow position:
               chr11:57767390-57767187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 90
               

               Conread position:
               96-298
               

               Cow position:
               chr11:25604151-25603937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               99, 205
               

               Conread position:
               96-300
               

               Cow position:
               chr11:25783909-25783696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               96-301
               

               Cow position:
               chr11:46314211-46313991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               96-324
               

               Cow position:
               chr11:7874339-7874098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               96-325
               

               Cow position:
               chr11:10956676-10956914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               102, 82
               

               Conread position:
               96-327
               

               Cow position:
               chr11:5218966-5219202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               96-327
               

               Cow position:
               chr11:77013968-77013741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               197, 110
               

               Conread position:
               96-330
               

               Cow position:
               chr11:15369593-15369339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               96-367
               

               Cow position:
               chr11:59463442-59463718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               42, 25
               

               Conread position:
               96-378
               

               Cow position:
               chr11:41281246-41280948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               31, 245
               

               Conread position:
               96-390
               

               Cow position:
               chr11:16315075-16314769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 267
               

               Conread position:
               96-391
               

               Cow position:
               chr11:19487280-19487586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 254
               

               Conread position:
               96-403
               

               Cow position:
               chr11:31413655-31413337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               87, 47
               

               Conread position:
               96-407
               

               Cow position:
               chr11:8670218-8669886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 238
               

               Conread position:
               96-408
               

               Cow position:
               chr11:56288744-56288427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               20, 249
               

               Conread position:
               96-417
               

               Cow position:
               chr11:2917395-2917716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               109, 95
               

               Conread position:
               96-419
               

               Cow position:
               chr11:70483653-70483991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               102, 207
               

               Conread position:
               96-419
               

               Cow position:
               chr11:77758564-77758888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               109, 15
               

               Conread position:
               96-420
               

               Cow position:
               chr11:18699069-18698744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               96-420
               

               Cow position:
               chr11:44032204-44031869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               98, 47
               

               Conread position:
               96-420
               

               Cow position:
               chr11:55334116-55333778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               96-420
               

               Cow position:
               chr11:62742451-62742766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               101, 15
               

               Conread position:
               96-420
               

               Cow position:
               chr11:80756588-80756915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               11, 96
               

               Conread position:
               96-440
               

               Cow position:
               chr11:19247006-19247345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 54
               

               Conread position:
               96-440
               

               Cow position:
               chr11:27913484-27913126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               63, 94
               

               Conread position:
               96-440
               

               Cow position:
               chr11:30165710-30165362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               251
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               20, 202
               

               Conread position:
               96-441
               

               Cow position:
               chr11:2874599-2874240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               101, 19
               

               Conread position:
               96-441
               

               Cow position:
               chr11:15772515-15772868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 242
               

               Conread position:
               96-441
               

               Cow position:
               chr11:33348001-33348334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               188, 57
               

               Conread position:
               96-441
               

               Cow position:
               chr11:40794146-40794502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               11, 249
               

               Conread position:
               96-441
               

               Cow position:
               chr11:45742567-45742233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               111, 19
               

               Conread position:
               96-441
               

               Cow position:
               chr11:48672916-48672556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               11, 253
               

               Conread position:
               96-441
               

               Cow position:
               chr11:63433867-63434204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               21, 122
               

               Conread position:
               96-441
               

               Cow position:
               chr11:77745048-77745406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               20, 279
               

               Conread position:
               96-441
               

               Cow position:
               chr11:83926233-83925898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               83, 29
               

               Conread position:
               96-441
               

               Cow position:
               chr11:84385439-84385786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               255
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               15, 50
               

               Conread position:
               97-205
               

               Cow position:
               chr11:8828206-8828099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               97-260
               

               Cow position:
               chr11:8421928-8422091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-264
               

               Cow position:
               chr11:37565068-37564896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               97-264
               

               Cow position:
               chr11:44176789-44176618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               99, 18
               

               Conread position:
               97-282
               

               Cow position:
               chr11:26442305-26442500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               97-283
               

               Cow position:
               chr11:34778244-34778440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               97-284
               

               Cow position:
               chr11:20117275-20117076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               97-284
               

               Cow position:
               chr11:34010547-34010365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               97-285
               

               Cow position:
               chr11:65058415-65058611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               106, 141
               

               Conread position:
               97-286
               

               Cow position:
               chr11:42064027-42064224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               97, 133
               

               Conread position:
               97-298
               

               Cow position:
               chr11:20234881-20234674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               111, 17
               

               Conread position:
               97-300
               

               Cow position:
               chr11:21830014-21830222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               106, 86
               

               Conread position:
               97-307
               

               Cow position:
               chr11:37099975-37100193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               107, 211
               

               Conread position:
               97-317
               

               Cow position:
               chr11:66939395-66939626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               110, 12
               

               Conread position:
               97-330
               

               Cow position:
               chr11:30172498-30172263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               97-331
               

               Cow position:
               chr11:15467644-15467412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               16, 46
               

               Conread position:
               97-334
               

               Cow position:
               chr11:61675661-61675418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 114
               

               Conread position:
               97-387
               

               Cow position:
               chr11:50937563-50937848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               203, 14
               

               Conread position:
               97-402
               

               Cow position:
               chr11:5418062-5418377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               97-403
               

               Cow position:
               chr11:5433464-5433148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               19, 91
               

               Conread position:
               97-413
               

               Cow position:
               chr11:13940385-13940065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               19, 71
               

               Conread position:
               97-419
               

               Cow position:
               chr11:7460429-7460747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 37
               

               Conread position:
               97-420
               

               Cow position:
               chr11:13863902-13864231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 239
               

               Conread position:
               97-422
               

               Cow position:
               chr11:18484003-18484301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               20, 82
               

               Conread position:
               97-441
               

               Cow position:
               chr11:42016440-42016784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               251
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               97-441
               

               Cow position:
               chr11:48296222-48295884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               97-441
               

               Cow position:
               chr11:53778817-53778466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               83, 254
               

               Conread position:
               97-441
               

               Cow position:
               chr11:68770560-68770212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               96, 64
               

               Conread position:
               97-441
               

               Cow position:
               chr11:79728474-79728818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               97-441
               

               Cow position:
               chr11:85723890-85723551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               100, 14
               

               Conread position:
               97-442
               

               Cow position:
               chr11:13500210-13499864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 46
               

               Conread position:
               98-186
               

               Cow position:
               chr11:36180638-36180551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               78
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               98-204
               

               Cow position:
               chr11:22102558-22102668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr11:35732883-35733055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 97
               

               Conread position:
               98-264
               

               Cow position:
               chr11:63849752-63849929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               98-264
               

               Cow position:
               chr11:67208445-67208275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 57
               

               Conread position:
               98-264
               

               Cow position:
               chr11:71303776-71303601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               98-265
               

               Cow position:
               chr11:36361444-36361621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               98-283
               

               Cow position:
               chr11:77227726-77227542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               105, 80
               

               Conread position:
               98-284
               

               Cow position:
               chr11:23220559-23220365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               98-284
               

               Cow position:
               chr11:41278381-41278188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               110, 12
               

               Conread position:
               98-285
               

               Cow position:
               chr11:73940364-73940562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               98-286
               

               Cow position:
               chr11:6353005-6352809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               18, 138
               

               Conread position:
               98-286
               

               Cow position:
               chr11:42498041-42497845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               18, 168
               

               Conread position:
               98-292
               

               Cow position:
               chr11:21124413-21124614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               104, 187
               

               Conread position:
               98-295
               

               Cow position:
               chr11:10876475-10876271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               108, 33
               

               Conread position:
               98-296
               

               Cow position:
               chr11:42084478-42084684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               98-297
               

               Cow position:
               chr11:18574661-18574868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               106, 18
               

               Conread position:
               98-311
               

               Cow position:
               chr11:45671184-45671393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               98-323
               

               Cow position:
               chr11:5328982-5328749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               16, 136
               

               Conread position:
               98-325
               

               Cow position:
               chr11:37989426-37989661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               98-327
               

               Cow position:
               chr11:27461917-27462141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               184, 12
               

               Conread position:
               98-330
               

               Cow position:
               chr11:71934750-71935001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 101
               

               Conread position:
               98-331
               

               Cow position:
               chr11:42884588-42884833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               18, 142
               

               Conread position:
               98-348
               

               Cow position:
               chr11:5961502-5961239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               109, 11
               

               Conread position:
               98-367
               

               Cow position:
               chr11:72871094-72870820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               98-390
               

               Cow position:
               chr11:31228149-31227865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               107, 34
               

               Conread position:
               98-403
               

               Cow position:
               chr11:64077305-64077620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               18, 244
               

               Conread position:
               98-404
               

               Cow position:
               chr11:14470555-14470253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               108, 16
               

               Conread position:
               98-404
               

               Cow position:
               chr11:25791494-25791804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 249
               

               Conread position:
               98-416
               

               Cow position:
               chr11:4662862-4663175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               177, 38
               

               Conread position:
               98-416
               

               Cow position:
               chr11:11125862-11125533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               19, 46
               

               Conread position:
               98-418
               

               Cow position:
               chr11:76890236-76889918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               107, 11
               

               Conread position:
               98-420
               

               Cow position:
               chr11:31866776-31866466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 172
               

               Conread position:
               98-420
               

               Cow position:
               chr11:35347554-35347887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               18, 241
               

               Conread position:
               98-420
               

               Cow position:
               chr11:49057579-49057269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               93, 79
               

               Conread position:
               98-420
               

               Cow position:
               chr11:63065850-63065526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               98-420
               

               Cow position:
               chr11:80923127-80923457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               98-426
               

               Cow position:
               chr11:81167835-81168170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               109, 284
               

               Conread position:
               98-428
               

               Cow position:
               chr11:41133883-41134206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               18, 114
               

               Conread position:
               98-428
               

               Cow position:
               chr11:71390378-71390704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               201, 114
               

               Conread position:
               98-438
               

               Cow position:
               chr11:26117542-26117872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               98-441
               

               Cow position:
               chr11:48383727-48383378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 205
               

               Conread position:
               98-441
               

               Cow position:
               chr11:75479828-75480177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               253
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               109, 11
               

               Conread position:
               99-248
               

               Cow position:
               chr11:3267473-3267617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               99-264
               

               Cow position:
               chr11:62535102-62534931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 103
               

               Conread position:
               99-264
               

               Cow position:
               chr11:83028187-83028016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               86, 60
               

               Conread position:
               99-285
               

               Cow position:
               chr11:43973090-43972897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               99-286
               

               Cow position:
               chr11:7500944-7500749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               55, 63
               

               Conread position:
               99-298
               

               Cow position:
               chr11:1980069-1980278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               17, 200
               

               Conread position:
               99-302
               

               Cow position:
               chr11:5176187-5176390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               89, 12
               

               Conread position:
               99-314
               

               Cow position:
               chr11:63382002-63382221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               102, 83
               

               Conread position:
               99-315
               

               Cow position:
               chr11:63975325-63975098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               106, 16
               

               Conread position:
               99-328
               

               Cow position:
               chr11:57503679-57503438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 83
               

               Conread position:
               99-331
               

               Cow position:
               chr11:2327884-2327638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               99-332
               

               Cow position:
               chr11:64044412-64044185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               181, 79
               

               Conread position:
               99-402
               

               Cow position:
               chr11:26066996-26067298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               105, 11
               

               Conread position:
               99-403
               

               Cow position:
               chr11:46329694-46329381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               99-410
               

               Cow position:
               chr11:67345465-67345770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               104, 10
               

               Conread position:
               99-412
               

               Cow position:
               chr11:84228528-84228837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               95, 79
               

               Conread position:
               99-414
               

               Cow position:
               chr11:62789321-62789001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               103, 12
               

               Conread position:
               99-420
               

               Cow position:
               chr11:23251403-23251725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               99-420
               

               Cow position:
               chr11:38334716-38334393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               99, 68
               

               Conread position:
               99-420
               

               Cow position:
               chr11:74316902-74316579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 194
               

               Conread position:
               99-420
               

               Cow position:
               chr11:77750564-77750905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               11, 178
               

               Conread position:
               99-423
               

               Cow position:
               chr11:23407654-23407323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               102, 10
               

               Conread position:
               99-424
               

               Cow position:
               chr11:50472511-50472178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               106, 11
               

               Conread position:
               99-428
               

               Cow position:
               chr11:71492669-71492996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               99-429
               

               Cow position:
               chr11:76369334-76369663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 54
               

               Conread position:
               99-441
               

               Cow position:
               chr11:28367906-28367556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               50, 242
               

               Conread position:
               99-441
               

               Cow position:
               chr11:36194487-36194145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 9
               

               Conread position:
               100-259
               

               Cow position:
               chr11:15881226-15881393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               106, 49
               

               Conread position:
               100-279
               

               Cow position:
               chr11:62606613-62606424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               100-284
               

               Cow position:
               chr11:40538743-40538553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               100-295
               

               Cow position:
               chr11:58048528-58048321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               100-297
               

               Cow position:
               chr11:20205663-20205861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               11, 190
               

               Conread position:
               100-325
               

               Cow position:
               chr11:22676306-22676074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               100-327
               

               Cow position:
               chr11:78820345-78820111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 170
               

               Conread position:
               100-331
               

               Cow position:
               chr11:17721605-17721849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               100-376
               

               Cow position:
               chr11:3715433-3715146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               96, 42
               

               Conread position:
               100-387
               

               Cow position:
               chr11:53510301-53510604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               41, 187
               

               Conread position:
               100-414
               

               Cow position:
               chr11:55494859-55494552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               100-416
               

               Cow position:
               chr11:30192371-30192043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               108, 15
               

               Conread position:
               100-419
               

               Cow position:
               chr11:6245518-6245190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               12, 208
               

               Conread position:
               100-439
               

               Cow position:
               chr11:78380874-78381201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               12, 170
               

               Conread position:
               100-440
               

               Cow position:
               chr11:34646789-34646444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               83, 245
               

               Conread position:
               101-204
               

               Cow position:
               chr11:68592213-68592109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               101-248
               

               Cow position:
               chr11:38656989-38657145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               101-272
               

               Cow position:
               chr11:33369347-33369165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               101-279
               

               Cow position:
               chr11:41213246-41213056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               101-280
               

               Cow position:
               chr11:77241895-77241712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               102, 170
               

               Conread position:
               101-283
               

               Cow position:
               chr11:46784655-46784478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               101-284
               

               Cow position:
               chr11:30322300-30322490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 67
               

               Conread position:
               101-284
               

               Cow position:
               chr11:68326669-68326861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               101-284
               

               Cow position:
               chr11:76248239-76248052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               104, 42
               

               Conread position:
               101-298
               

               Cow position:
               chr11:86895566-86895366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               15, 191
               

               Conread position:
               101-330
               

               Cow position:
               chr11:3715018-3714779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               10, 201
               

               Conread position:
               101-331
               

               Cow position:
               chr11:47725082-47724857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               90, 48
               

               Conread position:
               101-413
               

               Cow position:
               chr11:30830430-30830742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               89, 43
               

               Conread position:
               101-416
               

               Cow position:
               chr11:4207503-4207183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               91, 14
               

               Conread position:
               101-419
               

               Cow position:
               chr11:70600633-70600951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 193
               

               Conread position:
               101-420
               

               Cow position:
               chr11:32054992-32055316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               93, 139
               

               Conread position:
               101-420
               

               Cow position:
               chr11:51687543-51687858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 44
               

               Conread position:
               101-424
               

               Cow position:
               chr11:50152620-50152954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               102, 257
               

               Conread position:
               101-441
               

               Cow position:
               chr11:65607497-65607839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               16, 232
               

               Conread position:
               102-404
               

               Cow position:
               chr11:47310791-47311102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               14, 233
               

               Conread position:
               102-412
               

               Cow position:
               chr11:27719147-27719448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               40, 96
               

               Conread position:
               102-420
               

               Cow position:
               chr11:43360595-43360918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               100, 164
               

               Conread position:
               102-420
               

               Cow position:
               chr11:72443306-72442980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               32, 28
               

               Conread position:
               102-441
               

               Cow position:
               chr11:17227458-17227794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               16, 101
               

               Conread position:
               103-420
               

               Cow position:
               chr11:258980-259306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 225
               

               Conread position:
               103-441
               

               Cow position:
               chr11:30708696-30708350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 235
               

               Conread position:
               103-441
               

               Cow position:
               chr11:40792502-40792853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               104-204
               

               Cow position:
               chr11:53460887-53460788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               104-264
               

               Cow position:
               chr11:81175788-81175619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               104-286
               

               Cow position:
               chr11:68829811-68829620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 12
               

               Conread position:
               104-314
               

               Cow position:
               chr11:64409157-64408946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 151
               

               Conread position:
               104-317
               

               Cow position:
               chr11:69417594-69417370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               104-334
               

               Cow position:
               chr11:18924937-18924695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               104-375
               

               Cow position:
               chr11:51195907-51196168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               228, 67
               

               Conread position:
               104-433
               

               Cow position:
               chr11:30808405-30808748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               13, 42
               

               Conread position:
               104-441
               

               Cow position:
               chr11:41215923-41215593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               103, 54
               

               Conread position:
               105-282
               

               Cow position:
               chr11:47412033-47411845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               105-284
               

               Cow position:
               chr11:58186062-58185885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               105-286
               

               Cow position:
               chr11:19657025-19657213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               105-325
               

               Cow position:
               chr11:866469-866250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               189, 102
               

               Conread position:
               105-387
               

               Cow position:
               chr11:30211074-30210806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               105-441
               

               Cow position:
               chr11:68909664-68909999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               10, 18
               

               Conread position:
               106-282
               

               Cow position:
               chr11:1485045-1485222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               106-284
               

               Cow position:
               chr11:75749655-75749482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               106-292
               

               Cow position:
               chr11:19549665-19549477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               106-298
               

               Cow position:
               chr11:60296926-60296720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               72, 140
               

               Conread position:
               106-300
               

               Cow position:
               chr11:74427867-74427665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               98, 191
               

               Conread position:
               106-315
               

               Cow position:
               chr11:34968424-34968645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               9, 144
               

               Conread position:
               106-327
               

               Cow position:
               chr11:27343461-27343227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               106-327
               

               Cow position:
               chr11:62811485-62811254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               9, 78
               

               Conread position:
               106-331
               

               Cow position:
               chr11:35924045-35923804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               106-362
               

               Cow position:
               chr11:83042051-83042335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               106-374
               

               Cow position:
               chr11:5075041-5075315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 231
               

               Conread position:
               106-376
               

               Cow position:
               chr11:1067250-1067532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               106-377
               

               Cow position:
               chr11:19946609-19946345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               178, 29
               

               Conread position:
               106-402
               

               Cow position:
               chr11:37918860-37919159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 129
               

               Conread position:
               106-411
               

               Cow position:
               chr11:81143355-81143674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 253
               

               Conread position:
               106-416
               

               Cow position:
               chr11:49872699-49873017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 168
               

               Conread position:
               106-420
               

               Cow position:
               chr11:21421750-21422068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               97, 142
               

               Conread position:
               106-420
               

               Cow position:
               chr11:47638836-47639162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               101, 236
               

               Conread position:
               106-420
               

               Cow position:
               chr11:49153128-49152819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               176, 81
               

               Conread position:
               106-423
               

               Cow position:
               chr11:67600966-67600646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 227
               

               Conread position:
               106-425
               

               Cow position:
               chr11:1380867-1380544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 254
               

               Conread position:
               106-428
               

               Cow position:
               chr11:66041461-66041131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               9, 184
               

               Conread position:
               106-441
               

               Cow position:
               chr11:6423210-6423560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               89, 244
               

               Conread position:
               106-441
               

               Cow position:
               chr11:17889539-17889875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               101, 237
               

               Conread position:
               106-441
               

               Cow position:
               chr11:25620202-25620545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               102, 79
               

               Conread position:
               106-441
               

               Cow position:
               chr11:40818445-40818788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               106-441
               

               Cow position:
               chr11:45276960-45277302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               72, 177
               

               Conread position:
               106-441
               

               Cow position:
               chr11:56729124-56728801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               9, 77
               

               Conread position:
               107-286
               

               Cow position:
               chr11:73796981-73797166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               97, 160
               

               Conread position:
               107-331
               

               Cow position:
               chr11:35669779-35669998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               107-419
               

               Cow position:
               chr11:32693306-32693603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               107-420
               

               Cow position:
               chr11:42291653-42291965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               99, 201
               

               Conread position:
               108-359
               

               Cow position:
               chr11:64048576-64048333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               178, 39
               

               Conread position:
               109-205
               

               Cow position:
               chr11:26823297-26823201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               109-292
               

               Cow position:
               chr11:63407879-63407692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               89, 47
               

               Conread position:
               109-324
               

               Cow position:
               chr11:57608281-57608496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               95, 52
               

               Conread position:
               109-330
               

               Cow position:
               chr11:34644841-34644609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               87, 10
               

               Conread position:
               109-403
               

               Cow position:
               chr11:5486201-5485894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 67
               

               Conread position:
               109-420
               

               Cow position:
               chr11:13592925-13592604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               7, 234
               

               Conread position:
               109-420
               

               Cow position:
               chr11:38236430-38236110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               95, 232
               

               Conread position:
               109-439
               

               Cow position:
               chr11:48660115-48659778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               109-442
               

               Cow position:
               chr11:8544832-8545162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               96, 25
               

               Conread position:
               111-259
               

               Cow position:
               chr11:59744179-59744033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               111-284
               

               Cow position:
               chr11:9279615-9279435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 133
               

               Conread position:
               111-284
               

               Cow position:
               chr11:26535967-26535790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               86, 130
               

               Conread position:
               111-284
               

               Cow position:
               chr11:36300401-36300575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               95, 32
               

               Conread position:
               111-284
               

               Cow position:
               chr11:79548750-79548935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               111-284
               

               Cow position:
               chr11:80586448-80586277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               111-286
               

               Cow position:
               chr11:6006492-6006313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               92, 160
               

               Conread position:
               111-292
               

               Cow position:
               chr11:27502520-27502709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 20
               

               Conread position:
               111-303
               

               Cow position:
               chr11:36092736-36092931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               92, 54
               

               Conread position:
               111-308
               

               Cow position:
               chr11:31537265-31537464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               129, 105
               

               Conread position:
               111-325
               

               Cow position:
               chr11:64101956-64101734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               111-327
               

               Cow position:
               chr11:18447318-18447535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               173, 80
               

               Conread position:
               111-332
               

               Cow position:
               chr11:29677390-29677154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               111-338
               

               Cow position:
               chr11:35351850-35352096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               77, 165
               

               Conread position:
               111-367
               

               Cow position:
               chr11:84890544-84890801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               111-397
               

               Cow position:
               chr11:29659743-29659452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               111-420
               

               Cow position:
               chr11:6233695-6234012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               67, 237
               

               Conread position:
               111-420
               

               Cow position:
               chr11:18508845-18509151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               18, 187
               

               Conread position:
               111-420
               

               Cow position:
               chr11:48932406-48932718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               120, 151
               

               Conread position:
               111-420
               

               Cow position:
               chr11:68904905-68905208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 65
               

               Conread position:
               111-421
               

               Cow position:
               chr11:38639282-38638983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               191, 72
               

               Conread position:
               111-433
               

               Cow position:
               chr11:67614742-67615075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               91, 122
               

               Conread position:
               111-439
               

               Cow position:
               chr11:70978552-70978881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 52
               

               Conread position:
               111-440
               

               Cow position:
               chr11:37804369-37804702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               94, 229
               

               Conread position:
               111-441
               

               Cow position:
               chr11:9270555-9270876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               102, 34
               

               Conread position:
               111-441
               

               Cow position:
               chr11:36286887-36286547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               88, 14
               

               Conread position:
               111-441
               

               Cow position:
               chr11:41985865-41986193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               83, 231
               

               Conread position:
               111-441
               

               Cow position:
               chr11:45283110-45282779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               64, 116
               

               Conread position:
               112-377
               

               Cow position:
               chr11:41603519-41603780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               174, 65
               

               Conread position:
               113-428
               

               Cow position:
               chr11:40608412-40608739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 57
               

               Conread position:
               114-286
               

               Cow position:
               chr11:42065832-42065650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               115-301
               

               Cow position:
               chr11:17074049-17074232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 149
               

               Conread position:
               115-332
               

               Cow position:
               chr11:63485111-63484899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               66, 172
               

               Conread position:
               115-367
               

               Cow position:
               chr11:41313483-41313737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               115-380
               

               Cow position:
               chr11:4199453-4199179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 163
               

               Conread position:
               115-387
               

               Cow position:
               chr11:55744648-55744371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               89, 226
               

               Conread position:
               115-396
               

               Cow position:
               chr11:6194567-6194298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               176, 67
               

               Conread position:
               115-406
               

               Cow position:
               chr11:32398820-32398517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 122
               

               Conread position:
               115-418
               

               Cow position:
               chr11:70206494-70206192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               71, 124
               

               Conread position:
               115-420
               

               Cow position:
               chr11:21843960-21844266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               77, 116
               

               Conread position:
               115-420
               

               Cow position:
               chr11:30209644-30209955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               91, 30
               

               Conread position:
               115-420
               

               Cow position:
               chr11:49149225-49148906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               73, 239
               

               Conread position:
               115-420
               

               Cow position:
               chr11:51729453-51729155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               168, 56
               

               Conread position:
               115-443
               

               Cow position:
               chr11:68112080-68112413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               80, 303
               

               Conread position:
               116-286
               

               Cow position:
               chr11:35980963-35981141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               87, 118
               

               Conread position:
               116-420
               

               Cow position:
               chr11:8988052-8988362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               116-420
               

               Cow position:
               chr11:21852138-21852437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               168, 66
               

               Conread position:
               117-283
               

               Cow position:
               chr11:65858240-65858086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               117-410
               

               Cow position:
               chr11:55762033-55761745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               169, 7
               

               Conread position:
               117-420
               

               Cow position:
               chr11:18572960-18572668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               168, 60
               

               Conread position:
               117-423
               

               Cow position:
               chr11:81405990-81406295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               89, 178
               

               Conread position:
               118-371
               

               Cow position:
               chr11:18543345-18543593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               119-284
               

               Cow position:
               chr11:60720279-60720453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               120-327
               

               Cow position:
               chr11:39250138-39249929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 20
               

               Conread position:
               120-331
               

               Cow position:
               chr11:35109366-35109585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               85, 23
               

               Conread position:
               122-282
               

               Cow position:
               chr11:21173265-21173433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 56
               

               Conread position:
               122-282
               

               Cow position:
               chr11:26343274-26343106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 153
               

               Conread position:
               122-332
               

               Cow position:
               chr11:22977710-22977922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               34, 22
               

               Conread position:
               122-420
               

               Cow position:
               chr11:13042976-13043277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               75, 207
               

               Conread position:
               122-420
               

               Cow position:
               chr11:48474881-48474570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               47, 231
               

               Conread position:
               123-284
               

               Cow position:
               chr11:2836031-2835861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               123-286
               

               Cow position:
               chr11:5467252-5467082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               123-286
               

               Cow position:
               chr11:56676096-56675925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               123-301
               

               Cow position:
               chr11:35149573-35149381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 115
               

               Conread position:
               123-326
               

               Cow position:
               chr11:34467733-34467529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               78, 156
               

               Conread position:
               123-342
               

               Cow position:
               chr11:39554018-39554257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               123-363
               

               Cow position:
               chr11:5641901-5642147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               164, 72
               

               Conread position:
               123-420
               

               Cow position:
               chr11:28993577-28993865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 77
               

               Conread position:
               123-420
               

               Cow position:
               chr11:31337550-31337249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               160, 54
               

               Conread position:
               123-420
               

               Cow position:
               chr11:53463113-53462810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               81, 221
               

               Conread position:
               123-420
               

               Cow position:
               chr11:73353896-73354187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               246, 165
               

               Conread position:
               123-441
               

               Cow position:
               chr11:71009278-71008987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               171, 49
               

               Conread position:
               125-387
               

               Cow position:
               chr11:35926740-35927007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               125-406
               

               Cow position:
               chr11:30728570-30728285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               77, 34
               

               Conread position:
               125-420
               

               Cow position:
               chr11:34144750-34145048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               66, 143
               

               Conread position:
               125-420
               

               Cow position:
               chr11:63435691-63435384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               79, 156
               

               Conread position:
               125-420
               

               Cow position:
               chr11:85703858-85703573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               69, 126
               

               Conread position:
               125-441
               

               Cow position:
               chr11:4674275-4674596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 33
               

               Conread position:
               132-420
               

               Cow position:
               chr11:63202085-63202380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               73, 202
               

               Conread position:
               133-428
               

               Cow position:
               chr11:38670851-38670542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               73, 165
               

               Conread position:
               136-280
               

               Cow position:
               chr11:17807803-17807956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               138-439
               

               Cow position:
               chr11:82940469-82940768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 131
               

               Conread position:
               140-347
               

               Cow position:
               chr11:84977212-84977422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               49, 9
               

               Conread position:
               140-416
               

               Cow position:
               chr11:17493637-17493349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               70, 27
               

               Conread position:
               140-420
               

               Cow position:
               chr11:87155675-87155386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               66, 200
               

               Conread position:
               144-422
               

               Cow position:
               chr11:65409021-65409291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               137, 32
               

               Conread position:
               145-294
               

               Cow position:
               chr11:35140059-35139901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               145-337
               

               Cow position:
               chr11:34136390-34136188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               145-439
               

               Cow position:
               chr11:49934594-49934884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               143, 50
               

               Conread position:
               146-441
               

               Cow position:
               chr11:71868455-71868757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               60, 27
               

               Conread position:
               150-421
               

               Cow position:
               chr11:34113406-34113129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               50, 177
               

               Conread position:
               154-420
               

               Cow position:
               chr11:18243805-18244071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 84
               

               Conread position:
               154-441
               

               Cow position:
               chr11:59873063-59872783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               45, 101
               

               Conread position:
               161-441
               

               Cow position:
               chr11:70086461-70086176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               40, 85
               

               Conread position:
               168-441
               

               Cow position:
               chr11:40478731-40479003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               33, 159
               

               Conread position:
               170-420
               

               Cow position:
               chr11:32436450-32436200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               112, 76
               

               Conread position:
               173-420
               

               Cow position:
               chr11:39118874-39118619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               29, 63
               

               Conread position:
               177-425
               

               Cow position:
               chr11:23232411-23232653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               106, 34
               

               Conread position:
               178-420
               

               Cow position:
               chr11:16906937-16907177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 106
               

               Conread position:
               178-420
               

               Cow position:
               chr11:63847958-63847716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               25, 113
               

               Conread position:
               178-441
               

               Cow position:
               chr11:61958631-61958895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               24, 157
               

               Conread position:
               183-404
               

               Cow position:
               chr11:56654660-56654432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               183-441
               

               Cow position:
               chr11:38874299-38874552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               197-376
               

               Cow position:
               chr11:7013655-7013833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               200-412
               

               Cow position:
               chr11:1157730-1157520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 68
               

               Conread position:
               200-420
               

               Cow position:
               chr11:17831135-17831350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               83, 129
               

               Conread position:
               200-420
               

               Cow position:
               chr11:23128453-23128676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               80, 151
               

               Conread position:
               200-420
               

               Cow position:
               chr11:62155725-62155493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               200-423
               

               Cow position:
               chr11:34963156-34962926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               200-425
               

               Cow position:
               chr11:56734716-56734491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               78, 131
               

               Conread position:
               200-440
               

               Cow position:
               chr11:34032112-34032350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 65
               

               Conread position:
               200-441
               

               Cow position:
               chr11:23137967-23138210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 161
               

               Conread position:
               200-441
               

               Cow position:
               chr11:30925241-30925001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               86, 24
               

               Conread position:
               200-441
               

               Cow position:
               chr11:36799221-36799451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               200-441
               

               Cow position:
               chr11:63482343-63482575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               94, 76
               

               Conread position:
               201-428
               

               Cow position:
               chr11:377555-377786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               12, 146
               

               Conread position:
               201-441
               

               Cow position:
               chr11:26483792-26483565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 36
               

               Conread position:
               202-404
               

               Cow position:
               chr11:33345529-33345326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               95, 9
               

               Conread position:
               202-441
               

               Cow position:
               chr11:33753828-33754053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 22
               

               Conread position:
               202-443
               

               Cow position:
               chr11:54334412-54334181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               81, 9
               

               Conread position:
               204-441
               

               Cow position:
               chr11:64638443-64638682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 127
               

               Conread position:
               210-420
               

               Cow position:
               chr11:41175871-41176083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 122
               

               Conread position:
               211-441
               

               Cow position:
               chr11:52983751-52983528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               73, 121
               

               Conread position:
               229-410
               

               Cow position:
               chr11:18340983-18341166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 102
               

               Conread position:
               248-441
               

               Cow position:
               chr11:48041994-48042188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 86
               
Show alignments to all cow chromosomes.
Conread position:	48-204
Cow position:	chr11:68909291-68909444 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	118
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	67, 11
Conread position:	61-420
Cow position:	chr11:64009961-64009586 (view UCSC Genome Browser custom track)
Alignm length:	381
Alignm identity:	250
Alignm E-value:	9e-30
Alignm gaps (pig, cow):	15, 64
Conread position:	62-441
Cow position:	chr11:33414464-33414085 (view UCSC Genome Browser custom track)
Alignm length:	399
Alignm identity:	266
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	9, 30
Conread position:	75-282
Cow position:	chr11:77554438-77554645 (view UCSC Genome Browser custom track)
Alignm length:	212
Alignm identity:	146
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	33, 103
Conread position:	82-358
Cow position:	chr11:47837528-47837246 (view UCSC Genome Browser custom track)
Alignm length:	292
Alignm identity:	199
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	107, 31
Conread position:	87-264
Cow position:	chr11:50629477-50629299 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	129
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	105, 43
Conread position:	87-280
Cow position:	chr11:19147938-19148130 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	145
Alignm E-value:	9e-30
Alignm gaps (pig, cow):	114, 7
Conread position:	87-441
Cow position:	chr11:40459308-40458961 (view UCSC Genome Browser custom track)
Alignm length:	368
Alignm identity:	251
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	119, 24
Conread position:	88-282
Cow position:	chr11:64781300-64781091 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	150
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	9, 0
Conread position:	88-284
Cow position:	chr11:80370320-80370117 (view UCSC Genome Browser custom track)
Alignm length:	206
Alignm identity:	151
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	111, 160
Conread position:	88-388
Cow position:	chr11:29308788-29308479 (view UCSC Genome Browser custom track)
Alignm length:	318
Alignm identity:	218
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	27, 16
Conread position:	89-286
Cow position:	chr11:10563212-10563009 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	148
Alignm E-value:	9e-30
Alignm gaps (pig, cow):	13, 0
Conread position:	89-300
Cow position:	chr11:68883926-68883706 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	160
Alignm E-value:	9e-30
Alignm gaps (pig, cow):	23, 209
Conread position:	89-385
Cow position:	chr11:7385636-7385339 (view UCSC Genome Browser custom track)
Alignm length:	306
Alignm identity:	204
Alignm E-value:	6e-26
Alignm gaps (pig, cow):	102, 17
Conread position:	89-402
Cow position:	chr11:39060400-39060716 (view UCSC Genome Browser custom track)
Alignm length:	324
Alignm identity:	215
Alignm E-value:	7e-28
Alignm gaps (pig, cow):	103, 140
Conread position:	89-420
Cow position:	chr11:42835750-42836092 (view UCSC Genome Browser custom track)
Alignm length:	351
Alignm identity:	236
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	118, 22
Conread position:	90-269
Cow position:	chr11:82732951-82733132 (view UCSC Genome Browser custom track)
Alignm length:	183
Alignm identity:	130
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	111, 34
Conread position:	90-284
Cow position:	chr11:32126819-32126614 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	154
Alignm E-value:	7e-28
Alignm gaps (pig, cow):	92, 16
Conread position:	90-331
Cow position:	chr11:25119728-25119977 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	171
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	14, 247
Conread position:	90-341
Cow position:	chr11:35724174-35723913 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	182
Alignm E-value:	3e-31
Alignm gaps (pig, cow):	114, 214