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Cow genome map

           
Conread name:
           
Ss1.1-rfhi4027b_a6.5
        

               
Conread position:
               
70-439
               

               
Cow position:
               
chr15:24797954-24797588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
124, 157
               

               
Conread position:
               
71-440
               

               
Cow position:
               
chr15:38837592-38837965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
41, 272
               

               
Conread position:
               
72-420
               

               
Cow position:
               
chr15:19857618-19857987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
79-410
               

               
Cow position:
               
chr15:36391534-36391869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
85-440
               

               
Cow position:
               
chr15:24967664-24968013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
5, 32
               

               
Conread position:
               
86-201
               

               
Cow position:
               
chr15:36539810-36539924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
87-420
               

               
Cow position:
               
chr15:44658235-44658561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
88-205
               

               
Cow position:
               
chr15:40010677-40010561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
88-286
               

               
Cow position:
               
chr15:44977679-44977887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
88-293
               

               
Cow position:
               
chr15:48052731-48052527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
106, 55
               

               
Conread position:
               
88-381
               

               
Cow position:
               
chr15:32226994-32226702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
88-402
               

               
Cow position:
               
chr15:4138002-4138319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
88-420
               

               
Cow position:
               
chr15:19771006-19771336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
89-332
               

               
Cow position:
               
chr15:19554058-19553801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
89-420
               

               
Cow position:
               
chr15:5726185-5726528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
89-420
               

               
Cow position:
               
chr15:36353533-36353873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 203
               

               
Conread position:
               
89-441
               

               
Cow position:
               
chr15:7429836-7430197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
90-253
               

               
Cow position:
               
chr15:20906158-20905994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
102, 20
               

               
Conread position:
               
90-282
               

               
Cow position:
               
chr15:9314594-9314793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
90-298
               

               
Cow position:
               
chr15:29927832-29928050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
26, 157
               

               
Conread position:
               
91-203
               

               
Cow position:
               
chr15:33729754-33729869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
91-330
               

               
Cow position:
               
chr15:47844215-47843974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
110, 16
               

               
Conread position:
               
91-402
               

               
Cow position:
               
chr15:38161869-38162193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
91-420
               

               
Cow position:
               
chr15:12785297-12785628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
113, 188
               

               
Conread position:
               
91-420
               

               
Cow position:
               
chr15:21608857-21608520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 254
               

               
Conread position:
               
91-441
               

               
Cow position:
               
chr15:35641879-35642240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 156
               

               
Conread position:
               
92-279
               

               
Cow position:
               
chr15:3026934-3026733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
92-288
               

               
Cow position:
               
chr15:17124600-17124395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
92-301
               

               
Cow position:
               
chr15:9921891-9921683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
92-307
               

               
Cow position:
               
chr15:17650784-17650566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 126
               

               
Conread position:
               
92-326
               

               
Cow position:
               
chr15:18073588-18073833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
92-420
               

               
Cow position:
               
chr15:21822058-21821722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 250
               

               
Conread position:
               
92-421
               

               
Cow position:
               
chr15:286341-286686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
24, 290
               

               
Conread position:
               
92-426
               

               
Cow position:
               
chr15:8665736-8665382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 346
               

               
Conread position:
               
92-428
               

               
Cow position:
               
chr15:51460107-51460436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
92-441
               

               
Cow position:
               
chr15:28924895-28924543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
15, 97
               

               
Conread position:
               
93-205
               

               
Cow position:
               
chr15:43020768-43020656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
93-238
               

               
Cow position:
               
chr15:11635290-11635435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
93-277
               

               
Cow position:
               
chr15:16415170-16415359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
93-282
               

               
Cow position:
               
chr15:25877308-25877509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
93-286
               

               
Cow position:
               
chr15:17687377-17687581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 159
               

               
Conread position:
               
93-305
               

               
Cow position:
               
chr15:12045668-12045448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
93-330
               

               
Cow position:
               
chr15:15154167-15154418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
93-403
               

               
Cow position:
               
chr15:8427884-8428201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
93-420
               

               
Cow position:
               
chr15:49273833-49274156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
93-441
               

               
Cow position:
               
chr15:36621268-36621637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
94-193
               

               
Cow position:
               
chr15:10737909-10737808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
94-284
               

               
Cow position:
               
chr15:37719715-37719523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 127
               

               
Conread position:
               
94-287
               

               
Cow position:
               
chr15:17140147-17139951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
94-292
               

               
Cow position:
               
chr15:38420683-38420474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
94-330
               

               
Cow position:
               
chr15:31637169-31637419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
94-331
               

               
Cow position:
               
chr15:38652731-38652482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 140
               

               
Conread position:
               
94-385
               

               
Cow position:
               
chr15:41625025-41624717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
24, 229
               

               
Conread position:
               
94-419
               

               
Cow position:
               
chr15:43674075-43673734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
94-420
               

               
Cow position:
               
chr15:1857599-1857932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
94-424
               

               
Cow position:
               
chr15:1083500-1083166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
94-425
               

               
Cow position:
               
chr15:23780198-23779862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
68, 50
               

               
Conread position:
               
94-441
               

               
Cow position:
               
chr15:10088192-10088539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
94-441
               

               
Cow position:
               
chr15:30471106-30470750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
86, 251
               

               
Conread position:
               
95-260
               

               
Cow position:
               
chr15:11630226-11630057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
95-262
               

               
Cow position:
               
chr15:12034823-12034638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
95-282
               

               
Cow position:
               
chr15:13674308-13674122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
95-283
               

               
Cow position:
               
chr15:12314438-12314626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
95-294
               

               
Cow position:
               
chr15:21710235-21710029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
95-300
               

               
Cow position:
               
chr15:25595653-25595440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
110, 59
               

               
Conread position:
               
95-319
               

               
Cow position:
               
chr15:4248024-4248255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
95-330
               

               
Cow position:
               
chr15:24462396-24462645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
95-331
               

               
Cow position:
               
chr15:20856609-20856357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 231
               

               
Conread position:
               
95-332
               

               
Cow position:
               
chr15:9888458-9888701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
103, 48
               

               
Conread position:
               
95-367
               

               
Cow position:
               
chr15:15177189-15177466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
95-378
               

               
Cow position:
               
chr15:21941975-21941681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 172
               

               
Conread position:
               
95-388
               

               
Cow position:
               
chr15:25208885-25208590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 238
               

               
Conread position:
               
95-403
               

               
Cow position:
               
chr15:5719935-5719621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
95-441
               

               
Cow position:
               
chr15:4862038-4861694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
12, 213
               

               
Conread position:
               
96-204
               

               
Cow position:
               
chr15:11909072-11908966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
96-204
               

               
Cow position:
               
chr15:18784636-18784745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
96-260
               

               
Cow position:
               
chr15:26849657-26849492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
96-261
               

               
Cow position:
               
chr15:22242276-22242450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 100
               

               
Conread position:
               
96-262
               

               
Cow position:
               
chr15:23278376-23278539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
96-264
               

               
Cow position:
               
chr15:13846690-13846519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
105, 82
               

               
Conread position:
               
96-264
               

               
Cow position:
               
chr15:15147336-15147165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
96-266
               

               
Cow position:
               
chr15:15680972-15680790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
96-271
               

               
Cow position:
               
chr15:4284244-4284430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 145
               

               
Conread position:
               
96-278
               

               
Cow position:
               
chr15:4334035-4333853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
108, 33
               

               
Conread position:
               
96-280
               

               
Cow position:
               
chr15:40082862-40083050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
96-282
               

               
Cow position:
               
chr15:17853846-17853655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
96-283
               

               
Cow position:
               
chr15:45574758-45574568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
96-284
               

               
Cow position:
               
chr15:8127783-8127982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
96-284
               

               
Cow position:
               
chr15:41321077-41320884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
96-284
               

               
Cow position:
               
chr15:44809940-44810138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
96-285
               

               
Cow position:
               
chr15:8715308-8715112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
96-286
               

               
Cow position:
               
chr15:19976422-19976622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
96-286
               

               
Cow position:
               
chr15:21942927-21943126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
96-287
               

               
Cow position:
               
chr15:2522490-2522676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
96-300
               

               
Cow position:
               
chr15:46364649-46364856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
96-308
               

               
Cow position:
               
chr15:22444115-22443892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 178
               

               
Conread position:
               
96-330
               

               
Cow position:
               
chr15:49491529-49491762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
96-331
               

               
Cow position:
               
chr15:6227302-6227062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
96-333
               

               
Cow position:
               
chr15:20723109-20722864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
96-335
               

               
Cow position:
               
chr15:38861972-38862216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
96-353
               

               
Cow position:
               
chr15:36388171-36388430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
96-390
               

               
Cow position:
               
chr15:33178550-33178250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
96-396
               

               
Cow position:
               
chr15:29686436-29686733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
96-413
               

               
Cow position:
               
chr15:4919192-4918869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
96-419
               

               
Cow position:
               
chr15:39326626-39326311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
206, 86
               

               
Conread position:
               
96-420
               

               
Cow position:
               
chr15:12304515-12304846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
96-420
               

               
Cow position:
               
chr15:16928214-16927893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
96-420
               

               
Cow position:
               
chr15:44377146-44377479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
96-439
               

               
Cow position:
               
chr15:27900633-27900291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
96-439
               

               
Cow position:
               
chr15:45245668-45245313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 242
               

               
Conread position:
               
96-441
               

               
Cow position:
               
chr15:1804454-1804112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
96-441
               

               
Cow position:
               
chr15:2968209-2968556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 250
               

               
Conread position:
               
96-441
               

               
Cow position:
               
chr15:21420826-21421163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 19
               

               
Conread position:
               
96-441
               

               
Cow position:
               
chr15:22930479-22930120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
96-441
               

               
Cow position:
               
chr15:37381507-37381847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
96-441
               

               
Cow position:
               
chr15:38883015-38883372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 193
               

               
Conread position:
               
96-441
               

               
Cow position:
               
chr15:42142751-42143076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
190, 14
               

               
Conread position:
               
96-441
               

               
Cow position:
               
chr15:45478872-45479226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
21, 246
               

               
Conread position:
               
96-443
               

               
Cow position:
               
chr15:26573272-26573600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
97-205
               

               
Cow position:
               
chr15:40159773-40159664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
97-249
               

               
Cow position:
               
chr15:22474528-22474682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
97-277
               

               
Cow position:
               
chr15:14760764-14760578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
108, 173
               

               
Conread position:
               
97-281
               

               
Cow position:
               
chr15:40562804-40562616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
97-282
               

               
Cow position:
               
chr15:53028237-53028430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
97-283
               

               
Cow position:
               
chr15:11320927-11320729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
97-283
               

               
Cow position:
               
chr15:12764927-12764731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
97-284
               

               
Cow position:
               
chr15:43634155-43633965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
97-286
               

               
Cow position:
               
chr15:31040779-31040979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
97-300
               

               
Cow position:
               
chr15:22321016-22321226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 147
               

               
Conread position:
               
97-300
               

               
Cow position:
               
chr15:35419719-35419506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 147
               

               
Conread position:
               
97-331
               

               
Cow position:
               
chr15:37970680-37970931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
97-377
               

               
Cow position:
               
chr15:8549622-8549325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 251
               

               
Conread position:
               
97-387
               

               
Cow position:
               
chr15:6647328-6647624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
97-387
               

               
Cow position:
               
chr15:34139870-34140157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
97-395
               

               
Cow position:
               
chr15:51307793-51307501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
97-403
               

               
Cow position:
               
chr15:10400399-10400083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 212
               

               
Conread position:
               
97-404
               

               
Cow position:
               
chr15:36435078-36435393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 142
               

               
Conread position:
               
97-411
               

               
Cow position:
               
chr15:19950362-19950669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
94, 61
               

               
Conread position:
               
97-417
               

               
Cow position:
               
chr15:5409019-5408702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
97-419
               

               
Cow position:
               
chr15:34284532-34284208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
97-420
               

               
Cow position:
               
chr15:20391401-20391070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
97-420
               

               
Cow position:
               
chr15:43114844-43114518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
26, 165
               

               
Conread position:
               
97-420
               

               
Cow position:
               
chr15:50340993-50341325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
97-440
               

               
Cow position:
               
chr15:27973328-27972996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
130, 13
               

               
Conread position:
               
97-441
               

               
Cow position:
               
chr15:20534577-20534225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 244
               

               
Conread position:
               
97-441
               

               
Cow position:
               
chr15:36346669-36346985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
98-203
               

               
Cow position:
               
chr15:28259260-28259158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
98-205
               

               
Cow position:
               
chr15:20649441-20649549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
98-257
               

               
Cow position:
               
chr15:26380870-26380702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
98-264
               

               
Cow position:
               
chr15:30956446-30956274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
98-269
               

               
Cow position:
               
chr15:27555778-27555596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
98-272
               

               
Cow position:
               
chr15:26127957-26127769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
98-277
               

               
Cow position:
               
chr15:13873-14062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
98-283
               

               
Cow position:
               
chr15:14880458-14880275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
98-284
               

               
Cow position:
               
chr15:26522948-26522755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
98-288
               

               
Cow position:
               
chr15:25366186-25365989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
98-294
               

               
Cow position:
               
chr15:7811655-7811451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 197
               

               
Conread position:
               
98-301
               

               
Cow position:
               
chr15:52791817-52792026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
142, 103
               

               
Conread position:
               
98-330
               

               
Cow position:
               
chr15:7751037-7750793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
109, 74
               

               
Conread position:
               
98-330
               

               
Cow position:
               
chr15:25667348-25667104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
98-331
               

               
Cow position:
               
chr15:31495342-31495105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
98-379
               

               
Cow position:
               
chr15:42888959-42888674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 203
               

               
Conread position:
               
98-411
               

               
Cow position:
               
chr15:36793617-36793297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
98-412
               

               
Cow position:
               
chr15:29810003-29810314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
98-417
               

               
Cow position:
               
chr15:45549-45216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
107, 57
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr15:17100826-17100506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr15:18975887-18975563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr15:22531550-22531861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
103, 84
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr15:31857465-31857793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr15:43827896-43827569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
13, 161
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr15:24411315-24411621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
98-422
               

               
Cow position:
               
chr15:21893654-21893989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
19, 181
               

               
Conread position:
               
98-437
               

               
Cow position:
               
chr15:20314359-20314704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
106, 182
               

               
Conread position:
               
98-437
               

               
Cow position:
               
chr15:23572810-23572463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 10
               

               
Conread position:
               
98-441
               

               
Cow position:
               
chr15:225927-225586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 120
               

               
Conread position:
               
98-441
               

               
Cow position:
               
chr15:1301023-1301356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
189, 109
               

               
Conread position:
               
98-441
               

               
Cow position:
               
chr15:17084086-17084428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
98-441
               

               
Cow position:
               
chr15:21366313-21365972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
116, 45
               

               
Conread position:
               
98-441
               

               
Cow position:
               
chr15:39405616-39405951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 173
               

               
Conread position:
               
99-286
               

               
Cow position:
               
chr15:49002850-49003041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
99-298
               

               
Cow position:
               
chr15:13863856-13863650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
99-318
               

               
Cow position:
               
chr15:7479117-7478890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
99-318
               

               
Cow position:
               
chr15:7956208-7955966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
99-327
               

               
Cow position:
               
chr15:26851345-26851111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
182, 10
               

               
Conread position:
               
99-390
               

               
Cow position:
               
chr15:4789090-4788795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
17, 202
               

               
Conread position:
               
99-404
               

               
Cow position:
               
chr15:20390832-20390518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
99-420
               

               
Cow position:
               
chr15:22939445-22939120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
99-420
               

               
Cow position:
               
chr15:31137589-31137261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
8, 240
               

               
Conread position:
               
99-420
               

               
Cow position:
               
chr15:44051604-44051297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
99-421
               

               
Cow position:
               
chr15:40798539-40798223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
113, 10
               

               
Conread position:
               
99-428
               

               
Cow position:
               
chr15:10246117-10245793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
105, 164
               

               
Conread position:
               
99-428
               

               
Cow position:
               
chr15:29027003-29026669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
99-433
               

               
Cow position:
               
chr15:33693495-33693145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
99-441
               

               
Cow position:
               
chr15:4418525-4418181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 247
               

               
Conread position:
               
100-253
               

               
Cow position:
               
chr15:10585290-10585142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
100-261
               

               
Cow position:
               
chr15:18941910-18942076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
100-298
               

               
Cow position:
               
chr15:28067827-28067630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
146, 43
               

               
Conread position:
               
100-299
               

               
Cow position:
               
chr15:11564178-11564379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr15:39474056-39473839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
107, 183
               

               
Conread position:
               
100-368
               

               
Cow position:
               
chr15:38827434-38827172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
186, 10
               

               
Conread position:
               
100-404
               

               
Cow position:
               
chr15:24616446-24616760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
98, 198
               

               
Conread position:
               
100-418
               

               
Cow position:
               
chr15:40379089-40379414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
24, 175
               

               
Conread position:
               
100-420
               

               
Cow position:
               
chr15:608022-608351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
98, 246
               

               
Conread position:
               
100-423
               

               
Cow position:
               
chr15:26919390-26919068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
101, 53
               

               
Conread position:
               
100-428
               

               
Cow position:
               
chr15:52482949-52482618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
100-428
               

               
Cow position:
               
chr15:53163900-53164231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
100-439
               

               
Cow position:
               
chr15:43626343-43626686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 241
               

               
Conread position:
               
100-441
               

               
Cow position:
               
chr15:5158250-5158601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
106, 255
               

               
Conread position:
               
100-441
               

               
Cow position:
               
chr15:17233065-17233413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 237
               

               
Conread position:
               
100-441
               

               
Cow position:
               
chr15:35839219-35838869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 336
               

               
Conread position:
               
101-286
               

               
Cow position:
               
chr15:25358112-25358306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
101-307
               

               
Cow position:
               
chr15:53018967-53019188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 49
               

               
Conread position:
               
101-329
               

               
Cow position:
               
chr15:3695517-3695749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 167
               

               
Conread position:
               
101-381
               

               
Cow position:
               
chr15:14987875-14988155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
87, 130
               

               
Conread position:
               
101-396
               

               
Cow position:
               
chr15:50552654-50552348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
104, 148
               

               
Conread position:
               
101-411
               

               
Cow position:
               
chr15:20422888-20422584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
101-419
               

               
Cow position:
               
chr15:4295642-4295968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
101-420
               

               
Cow position:
               
chr15:1722961-1722646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
193, 104
               

               
Conread position:
               
101-441
               

               
Cow position:
               
chr15:18720215-18720530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
102-298
               

               
Cow position:
               
chr15:19942477-19942674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 170
               

               
Conread position:
               
102-330
               

               
Cow position:
               
chr15:8636413-8636175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
102-330
               

               
Cow position:
               
chr15:26158718-26158481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 185
               

               
Conread position:
               
102-428
               

               
Cow position:
               
chr15:20487319-20487001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
102-441
               

               
Cow position:
               
chr15:21583046-21582699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
101, 238
               

               
Conread position:
               
102-441
               

               
Cow position:
               
chr15:22938886-22938550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
94, 242
               

               
Conread position:
               
103-284
               

               
Cow position:
               
chr15:36887721-36887904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 113
               

               
Conread position:
               
103-285
               

               
Cow position:
               
chr15:19791718-19791532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
103-420
               

               
Cow position:
               
chr15:18671567-18671248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
103-441
               

               
Cow position:
               
chr15:23180322-23180657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
104-284
               

               
Cow position:
               
chr15:16657354-16657542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
104-418
               

               
Cow position:
               
chr15:21832563-21832225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
104-441
               

               
Cow position:
               
chr15:795135-794797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
11, 297
               

               
Conread position:
               
104-441
               

               
Cow position:
               
chr15:23798641-23798304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
10, 104
               

               
Conread position:
               
104-441
               

               
Cow position:
               
chr15:49922018-49922360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
74, 228
               

               
Conread position:
               
105-415
               

               
Cow position:
               
chr15:14740805-14740484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 152
               

               
Conread position:
               
106-269
               

               
Cow position:
               
chr15:20566012-20566185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
106-284
               

               
Cow position:
               
chr15:28098996-28099181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr15:44089280-44089081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 118
               

               
Conread position:
               
106-298
               

               
Cow position:
               
chr15:18763156-18762957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 155
               

               
Conread position:
               
106-299
               

               
Cow position:
               
chr15:44119585-44119388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
106-319
               

               
Cow position:
               
chr15:26529781-26529997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
106-332
               

               
Cow position:
               
chr15:6037562-6037335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
106-390
               

               
Cow position:
               
chr15:25349859-25350140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 87
               

               
Conread position:
               
106-390
               

               
Cow position:
               
chr15:39286526-39286238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
106-419
               

               
Cow position:
               
chr15:32980150-32979836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
106-419
               

               
Cow position:
               
chr15:51427942-51427620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 222
               

               
Conread position:
               
106-420
               

               
Cow position:
               
chr15:22553656-22553338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
72, 166
               

               
Conread position:
               
106-420
               

               
Cow position:
               
chr15:47821718-47822013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
180, 72
               

               
Conread position:
               
106-421
               

               
Cow position:
               
chr15:26912183-26911871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
106-424
               

               
Cow position:
               
chr15:6233131-6232807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 225
               

               
Conread position:
               
106-428
               

               
Cow position:
               
chr15:5072213-5071888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 202
               

               
Conread position:
               
106-428
               

               
Cow position:
               
chr15:35425907-35425600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
168, 72
               

               
Conread position:
               
106-433
               

               
Cow position:
               
chr15:52126805-52126475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 106
               

               
Conread position:
               
106-441
               

               
Cow position:
               
chr15:20472660-20472329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
106-441
               

               
Cow position:
               
chr15:30001581-30001905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
82, 183
               

               
Conread position:
               
106-441
               

               
Cow position:
               
chr15:43031142-43030805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 163
               

               
Conread position:
               
107-284
               

               
Cow position:
               
chr15:19002397-19002211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
107-383
               

               
Cow position:
               
chr15:4076216-4076493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 68
               

               
Conread position:
               
107-441
               

               
Cow position:
               
chr15:12722970-12723307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
70, 195
               

               
Conread position:
               
107-441
               

               
Cow position:
               
chr15:20370567-20370237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
8, 183
               

               
Conread position:
               
108-428
               

               
Cow position:
               
chr15:6462606-6462285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 182
               

               
Conread position:
               
109-204
               

               
Cow position:
               
chr15:51831904-51831809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-280
               

               
Cow position:
               
chr15:33992224-33992064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
109-420
               

               
Cow position:
               
chr15:9106932-9107240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
173, 29
               

               
Conread position:
               
109-425
               

               
Cow position:
               
chr15:32324319-32323997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
96, 7
               

               
Conread position:
               
111-293
               

               
Cow position:
               
chr15:17621431-17621242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
97, 160
               

               
Conread position:
               
111-298
               

               
Cow position:
               
chr15:32205267-32205077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
111-305
               

               
Cow position:
               
chr15:26617825-26618029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
111-319
               

               
Cow position:
               
chr15:48095246-48095467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 196
               

               
Conread position:
               
111-327
               

               
Cow position:
               
chr15:42380818-42381043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
72, 37
               

               
Conread position:
               
111-331
               

               
Cow position:
               
chr15:15041538-15041303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 148
               

               
Conread position:
               
111-390
               

               
Cow position:
               
chr15:36259707-36259428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
185, 58
               

               
Conread position:
               
111-399
               

               
Cow position:
               
chr15:41528076-41527795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
111-420
               

               
Cow position:
               
chr15:662574-662263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 228
               

               
Conread position:
               
111-420
               

               
Cow position:
               
chr15:4179049-4178732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 258
               

               
Conread position:
               
111-420
               

               
Cow position:
               
chr15:11996138-11995822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 225
               

               
Conread position:
               
111-420
               

               
Cow position:
               
chr15:31929008-31928694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
48, 228
               

               
Conread position:
               
111-420
               

               
Cow position:
               
chr15:46563587-46563288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
113, 100
               

               
Conread position:
               
111-420
               

               
Cow position:
               
chr15:50322501-50322800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
111-426
               

               
Cow position:
               
chr15:6905429-6905744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 229
               

               
Conread position:
               
111-427
               

               
Cow position:
               
chr15:5717609-5717921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 71
               

               
Conread position:
               
111-439
               

               
Cow position:
               
chr15:16112284-16112619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
65, 233
               

               
Conread position:
               
111-440
               

               
Cow position:
               
chr15:20290168-20289851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
63, 179
               

               
Conread position:
               
111-441
               

               
Cow position:
               
chr15:9648799-9648485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
111-441
               

               
Cow position:
               
chr15:10231853-10231522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
174, 102
               

               
Conread position:
               
111-441
               

               
Cow position:
               
chr15:28823922-28823599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
111-441
               

               
Cow position:
               
chr15:39599339-39599661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
112-286
               

               
Cow position:
               
chr15:4500589-4500774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
114-317
               

               
Cow position:
               
chr15:42353290-42353491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
168, 93
               

               
Conread position:
               
115-289
               

               
Cow position:
               
chr15:12913605-12913424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
115-379
               

               
Cow position:
               
chr15:38860238-38859963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
90, 243
               

               
Conread position:
               
115-382
               

               
Cow position:
               
chr15:31042776-31043035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
150, 72
               

               
Conread position:
               
115-428
               

               
Cow position:
               
chr15:16667604-16667290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 143
               

               
Conread position:
               
115-441
               

               
Cow position:
               
chr15:20459417-20459080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 220
               

               
Conread position:
               
116-286
               

               
Cow position:
               
chr15:21363058-21362884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 75
               

               
Conread position:
               
117-278
               

               
Cow position:
               
chr15:38386482-38386652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
117-416
               

               
Cow position:
               
chr15:85350-85050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
72, 145
               

               
Conread position:
               
120-284
               

               
Cow position:
               
chr15:16230128-16230291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
122-332
               

               
Cow position:
               
chr15:13783067-13782846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 127
               

               
Conread position:
               
122-434
               

               
Cow position:
               
chr15:16603731-16604040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 7
               

               
Conread position:
               
123-303
               

               
Cow position:
               
chr15:16644886-16644701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
123-330
               

               
Cow position:
               
chr15:16664183-16664406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
123-404
               

               
Cow position:
               
chr15:9465576-9465866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
82, 236
               

               
Conread position:
               
123-416
               

               
Cow position:
               
chr15:11559450-11559155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
123-419
               

               
Cow position:
               
chr15:7308256-7307952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
123-428
               

               
Cow position:
               
chr15:1297648-1297950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
123-441
               

               
Cow position:
               
chr15:4485050-4485361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
55, 177
               

               
Conread position:
               
123-441
               

               
Cow position:
               
chr15:8579235-8578906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
62, 139
               

               
Conread position:
               
124-387
               

               
Cow position:
               
chr15:6969890-6970160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
124-420
               

               
Cow position:
               
chr15:26903096-26903401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 92
               

               
Conread position:
               
124-441
               

               
Cow position:
               
chr15:35112970-35112658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
159, 21
               

               
Conread position:
               
125-284
               

               
Cow position:
               
chr15:48351034-48351193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
125-324
               

               
Cow position:
               
chr15:17196049-17196261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
125-412
               

               
Cow position:
               
chr15:14888733-14888444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
174, 72
               

               
Conread position:
               
125-420
               

               
Cow position:
               
chr15:9622084-9622392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 172
               

               
Conread position:
               
127-420
               

               
Cow position:
               
chr15:10608403-10608101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
128-379
               

               
Cow position:
               
chr15:2953226-2952962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
132-330
               

               
Cow position:
               
chr15:33382489-33382692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 166
               

               
Conread position:
               
132-333
               

               
Cow position:
               
chr15:6102250-6102042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
72, 115
               

               
Conread position:
               
139-441
               

               
Cow position:
               
chr15:39621249-39621564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 214
               

               
Conread position:
               
145-420
               

               
Cow position:
               
chr15:10512345-10512066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
145-429
               

               
Cow position:
               
chr15:50664546-50664273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
148-397
               

               
Cow position:
               
chr15:32977911-32977664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
148-441
               

               
Cow position:
               
chr15:36773761-36773478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
165-439
               

               
Cow position:
               
chr15:51898169-51898448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 161
               

               
Conread position:
               
177-327
               

               
Cow position:
               
chr15:14261298-14261144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
177-409
               

               
Cow position:
               
chr15:5929860-5930084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
178-441
               

               
Cow position:
               
chr15:39316884-39316615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
197-420
               

               
Cow position:
               
chr15:20351814-20352034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 140
               

               
Conread position:
               
200-404
               

               
Cow position:
               
chr15:12633-12839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 195
               

               
Conread position:
               
200-404
               

               
Cow position:
               
chr15:35441093-35440887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
94, 76
               

               
Conread position:
               
200-410
               

               
Cow position:
               
chr15:47843266-47843052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
86, 140
               

               
Conread position:
               
200-418
               

               
Cow position:
               
chr15:35945515-35945730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
200-420
               

               
Cow position:
               
chr15:43599174-43599392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 123
               

               
Conread position:
               
200-428
               

               
Cow position:
               
chr15:12870879-12870652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
88, 138
               

               
Conread position:
               
200-431
               

               
Cow position:
               
chr15:21389179-21388953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
200-439
               

               
Cow position:
               
chr15:9781456-9781684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
94, 62
               

               
Conread position:
               
200-440
               

               
Cow position:
               
chr15:15573850-15573605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 66
               

               
Conread position:
               
200-441
               

               
Cow position:
               
chr15:10660570-10660324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 133
               

               
Conread position:
               
200-441
               

               
Cow position:
               
chr15:13554338-13554574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 140
               

               
Conread position:
               
201-420
               

               
Cow position:
               
chr15:35205167-35204944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
81, 136
               

               
Conread position:
               
203-434
               

               
Cow position:
               
chr15:28258469-28258237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
211-441
               

               
Cow position:
               
chr15:4534907-4535131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
124, 44
               

               
Conread position:
               
211-441
               

               
Cow position:
               
chr15:13387073-13387299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 165
               

               
Conread position:
               
211-441
               

               
Cow position:
               
chr15:35417629-35417402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
77, 126
               

               
Conread position:
               
230-428
               

               
Cow position:
               
chr15:22136705-22136894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
231-441
               

               
Cow position:
               
chr15:9526462-9526253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 102
               

               
Conread position:
               
255-441
               

               
Cow position:
               
chr15:37716890-37716705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 19
               
Show alignments to all cow chromosomes.