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Cow genome map

           
Conread name:
           
Ss1.1-rfhi4027b_a6.5
        

               
Conread position:
               
25-266
               

               
Cow position:
               
chr22:30362415-30362658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
36-284
               

               
Cow position:
               
chr22:36209528-36209270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
62-428
               

               
Cow position:
               
chr22:23833529-23833161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
146, 45
               

               
Conread position:
               
71-286
               

               
Cow position:
               
chr22:43573184-43572958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
119, 5
               

               
Conread position:
               
74-298
               

               
Cow position:
               
chr22:45012529-45012749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
75-334
               

               
Cow position:
               
chr22:12902624-12902883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
81-420
               

               
Cow position:
               
chr22:4563581-4563241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
181, 30
               

               
Conread position:
               
81-441
               

               
Cow position:
               
chr22:12830219-12830583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
84-392
               

               
Cow position:
               
chr22:1106295-1105971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
34, 280
               

               
Conread position:
               
85-264
               

               
Cow position:
               
chr22:11836848-11837027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
85-332
               

               
Cow position:
               
chr22:32327021-32326764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
85-439
               

               
Cow position:
               
chr22:14690737-14691104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
88-284
               

               
Cow position:
               
chr22:1991822-1991616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
89-321
               

               
Cow position:
               
chr22:24542586-24542339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
89-395
               

               
Cow position:
               
chr22:24903808-24903495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
89-420
               

               
Cow position:
               
chr22:23979991-23980330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
89-420
               

               
Cow position:
               
chr22:43398215-43397894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
89-437
               

               
Cow position:
               
chr22:13866886-13866515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 262
               

               
Conread position:
               
90-284
               

               
Cow position:
               
chr22:14601958-14602155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 143
               

               
Conread position:
               
90-331
               

               
Cow position:
               
chr22:6754045-6754301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
90-375
               

               
Cow position:
               
chr22:11813505-11813806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
90-420
               

               
Cow position:
               
chr22:59831-59491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 184
               

               
Conread position:
               
90-420
               

               
Cow position:
               
chr22:23806319-23806662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 264
               

               
Conread position:
               
91-274
               

               
Cow position:
               
chr22:36762256-36762065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
91-282
               

               
Cow position:
               
chr22:44717935-44717740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
91-284
               

               
Cow position:
               
chr22:17120670-17120467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
91-284
               

               
Cow position:
               
chr22:23209785-23209581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
91-292
               

               
Cow position:
               
chr22:16346613-16346403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
91-298
               

               
Cow position:
               
chr22:16340074-16339859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
5, 202
               

               
Conread position:
               
91-331
               

               
Cow position:
               
chr22:8287396-8287154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
110, 174
               

               
Conread position:
               
91-331
               

               
Cow position:
               
chr22:18545502-18545251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
111, 96
               

               
Conread position:
               
91-335
               

               
Cow position:
               
chr22:35215771-35215511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
91-387
               

               
Cow position:
               
chr22:14006384-14006096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
147, 33
               

               
Conread position:
               
91-392
               

               
Cow position:
               
chr22:2408907-2409211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 210
               

               
Conread position:
               
91-406
               

               
Cow position:
               
chr22:12681582-12681907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
91-419
               

               
Cow position:
               
chr22:36539439-36539782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
92-262
               

               
Cow position:
               
chr22:19306116-19305937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
92-274
               

               
Cow position:
               
chr22:11790200-11790010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
115, 17
               

               
Conread position:
               
92-283
               

               
Cow position:
               
chr22:6203166-6202966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
92-283
               

               
Cow position:
               
chr22:45801077-45800895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 115
               

               
Conread position:
               
92-303
               

               
Cow position:
               
chr22:35578561-35578778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
114, 204
               

               
Conread position:
               
92-308
               

               
Cow position:
               
chr22:9279233-9279017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 18
               

               
Conread position:
               
92-417
               

               
Cow position:
               
chr22:25221690-25222015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
92-427
               

               
Cow position:
               
chr22:28665488-28665160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
92-440
               

               
Cow position:
               
chr22:42685098-42684768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
93-205
               

               
Cow position:
               
chr22:33414310-33414420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
93-253
               

               
Cow position:
               
chr22:4083840-4084012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
93-274
               

               
Cow position:
               
chr22:35627562-35627375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
112, 17
               

               
Conread position:
               
93-286
               

               
Cow position:
               
chr22:21601309-21601511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 157
               

               
Conread position:
               
93-287
               

               
Cow position:
               
chr22:3937275-3937074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
113, 13
               

               
Conread position:
               
93-292
               

               
Cow position:
               
chr22:33522662-33522870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 147
               

               
Conread position:
               
93-297
               

               
Cow position:
               
chr22:26189084-26188875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
93-300
               

               
Cow position:
               
chr22:41025972-41025757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 156
               

               
Conread position:
               
93-323
               

               
Cow position:
               
chr22:26112580-26112341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
115, 18
               

               
Conread position:
               
93-335
               

               
Cow position:
               
chr22:37145531-37145290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
93-341
               

               
Cow position:
               
chr22:30446281-30446540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
111, 164
               

               
Conread position:
               
93-386
               

               
Cow position:
               
chr22:37139640-37139348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
93-387
               

               
Cow position:
               
chr22:37029392-37029691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
93-412
               

               
Cow position:
               
chr22:28071771-28071446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
93-420
               

               
Cow position:
               
chr22:4583774-4583439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
93-420
               

               
Cow position:
               
chr22:37202061-37201734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
93-424
               

               
Cow position:
               
chr22:22613314-22612987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
93-440
               

               
Cow position:
               
chr22:32661730-32661372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
25, 160
               

               
Conread position:
               
94-282
               

               
Cow position:
               
chr22:3540907-3541099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
94-284
               

               
Cow position:
               
chr22:10468722-10468528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
94-319
               

               
Cow position:
               
chr22:25809068-25809297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
98, 155
               

               
Conread position:
               
94-331
               

               
Cow position:
               
chr22:16235286-16235538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
94-331
               

               
Cow position:
               
chr22:26804036-26803784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
94-377
               

               
Cow position:
               
chr22:8733133-8733415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 111
               

               
Conread position:
               
94-404
               

               
Cow position:
               
chr22:27828591-27828281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 244
               

               
Conread position:
               
94-420
               

               
Cow position:
               
chr22:2095772-2095434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 255
               

               
Conread position:
               
94-420
               

               
Cow position:
               
chr22:8412743-8412409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
111, 200
               

               
Conread position:
               
94-432
               

               
Cow position:
               
chr22:44410927-44410594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
94-440
               

               
Cow position:
               
chr22:21746851-21746504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
107, 77
               

               
Conread position:
               
94-441
               

               
Cow position:
               
chr22:22860695-22861043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
95-203
               

               
Cow position:
               
chr22:11211480-11211589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
95-205
               

               
Cow position:
               
chr22:28290555-28290445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
95-266
               

               
Cow position:
               
chr22:13695076-13695249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
127, 20
               

               
Conread position:
               
95-273
               

               
Cow position:
               
chr22:12637815-12637628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
95-283
               

               
Cow position:
               
chr22:39471940-39472140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 152
               

               
Conread position:
               
95-286
               

               
Cow position:
               
chr22:15050568-15050378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 107
               

               
Conread position:
               
95-297
               

               
Cow position:
               
chr22:7518766-7518560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
95-332
               

               
Cow position:
               
chr22:6149176-6149425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
106, 203
               

               
Conread position:
               
95-368
               

               
Cow position:
               
chr22:3282619-3282892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
95-415
               

               
Cow position:
               
chr22:15914832-15915156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
23, 156
               

               
Conread position:
               
95-419
               

               
Cow position:
               
chr22:5291067-5290730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 246
               

               
Conread position:
               
95-420
               

               
Cow position:
               
chr22:3987734-3987398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
112, 251
               

               
Conread position:
               
95-420
               

               
Cow position:
               
chr22:11601249-11600920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
17, 170
               

               
Conread position:
               
95-420
               

               
Cow position:
               
chr22:43237187-43237526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
22, 251
               

               
Conread position:
               
95-439
               

               
Cow position:
               
chr22:33447866-33448216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 217
               

               
Conread position:
               
95-442
               

               
Cow position:
               
chr22:18838462-18838107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
93, 123
               

               
Conread position:
               
96-266
               

               
Cow position:
               
chr22:1645521-1645696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
96-274
               

               
Cow position:
               
chr22:1552109-1551928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
96-276
               

               
Cow position:
               
chr22:11221384-11221209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
163, 15
               

               
Conread position:
               
96-278
               

               
Cow position:
               
chr22:33449460-33449646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
96-282
               

               
Cow position:
               
chr22:13726906-13727095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 38
               

               
Conread position:
               
96-282
               

               
Cow position:
               
chr22:14488151-14487954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
96-282
               

               
Cow position:
               
chr22:20035031-20034848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
96-282
               

               
Cow position:
               
chr22:23630143-23630332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
96-282
               

               
Cow position:
               
chr22:34907482-34907295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 84
               

               
Conread position:
               
96-284
               

               
Cow position:
               
chr22:25312727-25312526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
96-285
               

               
Cow position:
               
chr22:1973607-1973805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
96-285
               

               
Cow position:
               
chr22:43730494-43730302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 184
               

               
Conread position:
               
96-286
               

               
Cow position:
               
chr22:1959450-1959251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
96-286
               

               
Cow position:
               
chr22:2702837-2702630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
96-286
               

               
Cow position:
               
chr22:4162372-4162568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
105, 136
               

               
Conread position:
               
96-286
               

               
Cow position:
               
chr22:10660088-10659896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
96-286
               

               
Cow position:
               
chr22:10671630-10671825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
96-286
               

               
Cow position:
               
chr22:17359685-17359490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 135
               

               
Conread position:
               
96-293
               

               
Cow position:
               
chr22:12673120-12673329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
96-296
               

               
Cow position:
               
chr22:30176934-30176724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
15, 178
               

               
Conread position:
               
96-298
               

               
Cow position:
               
chr22:5375607-5375398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 142
               

               
Conread position:
               
96-298
               

               
Cow position:
               
chr22:19413823-19414033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 201
               

               
Conread position:
               
96-302
               

               
Cow position:
               
chr22:12777173-12777377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
96-308
               

               
Cow position:
               
chr22:45104054-45104279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 211
               

               
Conread position:
               
96-315
               

               
Cow position:
               
chr22:26268064-26267833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 204
               

               
Conread position:
               
96-316
               

               
Cow position:
               
chr22:45375146-45374923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 179
               

               
Conread position:
               
96-319
               

               
Cow position:
               
chr22:16129355-16129121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
96-320
               

               
Cow position:
               
chr22:16840582-16840819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
96-330
               

               
Cow position:
               
chr22:23372649-23372896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
96-331
               

               
Cow position:
               
chr22:43704655-43704898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
96-332
               

               
Cow position:
               
chr22:7496895-7497144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
96-332
               

               
Cow position:
               
chr22:25247120-25246878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
96-338
               

               
Cow position:
               
chr22:6289287-6289545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
16, 203
               

               
Conread position:
               
96-367
               

               
Cow position:
               
chr22:8767527-8767250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
96-377
               

               
Cow position:
               
chr22:10122579-10122301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
198, 86
               

               
Conread position:
               
96-387
               

               
Cow position:
               
chr22:39602497-39602194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 246
               

               
Conread position:
               
96-390
               

               
Cow position:
               
chr22:11696981-11697285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
96-390
               

               
Cow position:
               
chr22:25690067-25690370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
106, 97
               

               
Conread position:
               
96-404
               

               
Cow position:
               
chr22:4132788-4132468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
99, 250
               

               
Conread position:
               
96-404
               

               
Cow position:
               
chr22:7082240-7081927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
44, 249
               

               
Conread position:
               
96-404
               

               
Cow position:
               
chr22:16533282-16532973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
111, 13
               

               
Conread position:
               
96-418
               

               
Cow position:
               
chr22:27619951-27619612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
96-419
               

               
Cow position:
               
chr22:25236917-25237265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 147
               

               
Conread position:
               
96-419
               

               
Cow position:
               
chr22:27826062-27825721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 268
               

               
Conread position:
               
96-419
               

               
Cow position:
               
chr22:46665284-46665615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
96-420
               

               
Cow position:
               
chr22:22013960-22013632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
96, 238
               

               
Conread position:
               
96-420
               

               
Cow position:
               
chr22:36560439-36560775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 169
               

               
Conread position:
               
96-421
               

               
Cow position:
               
chr22:15567810-15568136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
22, 189
               

               
Conread position:
               
96-423
               

               
Cow position:
               
chr22:1309526-1309850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
96-423
               

               
Cow position:
               
chr22:16291722-16292039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
96-424
               

               
Cow position:
               
chr22:15490868-15490536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 238
               

               
Conread position:
               
96-424
               

               
Cow position:
               
chr22:40374817-40374484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
101, 229
               

               
Conread position:
               
96-428
               

               
Cow position:
               
chr22:34895167-34894845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
96-429
               

               
Cow position:
               
chr22:6622041-6622372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
96-439
               

               
Cow position:
               
chr22:27681933-27681583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 14
               

               
Conread position:
               
96-440
               

               
Cow position:
               
chr22:4075673-4076028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 244
               

               
Conread position:
               
96-441
               

               
Cow position:
               
chr22:12313632-12313289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 147
               

               
Conread position:
               
96-441
               

               
Cow position:
               
chr22:14142913-14143253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
105, 131
               

               
Conread position:
               
96-441
               

               
Cow position:
               
chr22:32698972-32698626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
96-441
               

               
Cow position:
               
chr22:36562814-36563154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
96-441
               

               
Cow position:
               
chr22:40387363-40387025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 198
               

               
Conread position:
               
96-441
               

               
Cow position:
               
chr22:41044697-41045052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
97-264
               

               
Cow position:
               
chr22:9075619-9075444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
97-264
               

               
Cow position:
               
chr22:21905678-21905508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
97-264
               

               
Cow position:
               
chr22:37702185-37702015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
97-269
               

               
Cow position:
               
chr22:47820647-47820470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
97-276
               

               
Cow position:
               
chr22:17107765-17107590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 111
               

               
Conread position:
               
97-280
               

               
Cow position:
               
chr22:12853889-12854084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
97-284
               

               
Cow position:
               
chr22:2036219-2036024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
97-285
               

               
Cow position:
               
chr22:26140887-26140690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
98, 141
               

               
Conread position:
               
97-286
               

               
Cow position:
               
chr22:3730465-3730661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
97-286
               

               
Cow position:
               
chr22:6649893-6650092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
98, 151
               

               
Conread position:
               
97-292
               

               
Cow position:
               
chr22:30687227-30687033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
185, 12
               

               
Conread position:
               
97-343
               

               
Cow position:
               
chr22:243311-243067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
183, 14
               

               
Conread position:
               
97-389
               

               
Cow position:
               
chr22:25254386-25254087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
97-416
               

               
Cow position:
               
chr22:6096806-6097138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
91, 276
               

               
Conread position:
               
97-419
               

               
Cow position:
               
chr22:25205754-25206083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
97-419
               

               
Cow position:
               
chr22:26134007-26134346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 270
               

               
Conread position:
               
97-420
               

               
Cow position:
               
chr22:10983575-10983229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
97-420
               

               
Cow position:
               
chr22:13687903-13688221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
97-420
               

               
Cow position:
               
chr22:18196720-18196395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
108, 40
               

               
Conread position:
               
97-420
               

               
Cow position:
               
chr22:36133008-36132680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
98, 251
               

               
Conread position:
               
97-421
               

               
Cow position:
               
chr22:11131077-11130748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
100, 11
               

               
Conread position:
               
97-428
               

               
Cow position:
               
chr22:12929067-12929401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 200
               

               
Conread position:
               
97-438
               

               
Cow position:
               
chr22:34609208-34608870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
98-284
               

               
Cow position:
               
chr22:27401941-27401754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
98-291
               

               
Cow position:
               
chr22:18442535-18442740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
18, 203
               

               
Conread position:
               
98-296
               

               
Cow position:
               
chr22:16064049-16063836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
98-298
               

               
Cow position:
               
chr22:14600123-14600329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 132
               

               
Conread position:
               
98-329
               

               
Cow position:
               
chr22:1776270-1776028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
98-330
               

               
Cow position:
               
chr22:9983616-9983846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
196, 152
               

               
Conread position:
               
98-331
               

               
Cow position:
               
chr22:4156871-4157120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
102, 77
               

               
Conread position:
               
98-333
               

               
Cow position:
               
chr22:1653977-1654223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
98-345
               

               
Cow position:
               
chr22:6176076-6176332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
98-363
               

               
Cow position:
               
chr22:23358362-23358089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
98-377
               

               
Cow position:
               
chr22:1588503-1588217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
98-390
               

               
Cow position:
               
chr22:7140856-7140553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
98-390
               

               
Cow position:
               
chr22:19047625-19047907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
190, 13
               

               
Conread position:
               
98-396
               

               
Cow position:
               
chr22:12678212-12678514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
80, 233
               

               
Conread position:
               
98-404
               

               
Cow position:
               
chr22:13957437-13957754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
98-419
               

               
Cow position:
               
chr22:4993706-4994035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr22:7154083-7153767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 13
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr22:7913663-7913361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
258, 89
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr22:36432764-36433088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr22:12573414-12573088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
87, 175
               

               
Conread position:
               
98-439
               

               
Cow position:
               
chr22:19341401-19341071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
134, 12
               

               
Conread position:
               
98-439
               

               
Cow position:
               
chr22:22023111-22022758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
98-439
               

               
Cow position:
               
chr22:27577954-27577609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
106, 175
               

               
Conread position:
               
98-440
               

               
Cow position:
               
chr22:5616505-5616171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 104
               

               
Conread position:
               
98-440
               

               
Cow position:
               
chr22:40048767-40048423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
80, 142
               

               
Conread position:
               
98-441
               

               
Cow position:
               
chr22:10303225-10302880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
98-441
               

               
Cow position:
               
chr22:40120665-40121012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 17
               

               
Conread position:
               
99-266
               

               
Cow position:
               
chr22:7414839-7415019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 153
               

               
Conread position:
               
99-272
               

               
Cow position:
               
chr22:24595764-24595948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
99-282
               

               
Cow position:
               
chr22:14641645-14641838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 148
               

               
Conread position:
               
99-283
               

               
Cow position:
               
chr22:6800202-6800392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
99-286
               

               
Cow position:
               
chr22:2105791-2105594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
99-325
               

               
Cow position:
               
chr22:12447657-12447429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
99-330
               

               
Cow position:
               
chr22:17949769-17950004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 187
               

               
Conread position:
               
99-332
               

               
Cow position:
               
chr22:24583864-24584098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 190
               

               
Conread position:
               
99-332
               

               
Cow position:
               
chr22:39446503-39446257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
99-372
               

               
Cow position:
               
chr22:15737437-15737162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
103, 12
               

               
Conread position:
               
99-403
               

               
Cow position:
               
chr22:27635688-27635374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 238
               

               
Conread position:
               
99-417
               

               
Cow position:
               
chr22:4060739-4061062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
17, 193
               

               
Conread position:
               
99-420
               

               
Cow position:
               
chr22:1326629-1326300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
99-420
               

               
Cow position:
               
chr22:10295234-10294924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
189, 9
               

               
Conread position:
               
99-420
               

               
Cow position:
               
chr22:33399281-33399600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
105, 233
               

               
Conread position:
               
99-420
               

               
Cow position:
               
chr22:46626168-46626499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
52, 199
               

               
Conread position:
               
99-426
               

               
Cow position:
               
chr22:27275676-27275340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
13, 254
               

               
Conread position:
               
99-438
               

               
Cow position:
               
chr22:16621398-16621039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
99-441
               

               
Cow position:
               
chr22:41854108-41853762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
100-195
               

               
Cow position:
               
chr22:25291692-25291597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
100-206
               

               
Cow position:
               
chr22:44018042-44018151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
100-286
               

               
Cow position:
               
chr22:4560603-4560798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
102, 9
               

               
Conread position:
               
100-286
               

               
Cow position:
               
chr22:15950659-15950848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
113, 149
               

               
Conread position:
               
100-319
               

               
Cow position:
               
chr22:28937732-28937953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 79
               

               
Conread position:
               
100-325
               

               
Cow position:
               
chr22:43965911-43965669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
100-327
               

               
Cow position:
               
chr22:5016696-5016470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
100-333
               

               
Cow position:
               
chr22:3430405-3430154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 135
               

               
Conread position:
               
100-341
               

               
Cow position:
               
chr22:12188267-12188522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 228
               

               
Conread position:
               
100-341
               

               
Cow position:
               
chr22:12195353-12195609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 229
               

               
Conread position:
               
100-378
               

               
Cow position:
               
chr22:15050384-15050103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 173
               

               
Conread position:
               
100-387
               

               
Cow position:
               
chr22:3301128-3301423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 249
               

               
Conread position:
               
100-403
               

               
Cow position:
               
chr22:18193675-18193357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 224
               

               
Conread position:
               
100-414
               

               
Cow position:
               
chr22:3842826-3842505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
100-420
               

               
Cow position:
               
chr22:8090328-8090647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
101, 163
               

               
Conread position:
               
100-420
               

               
Cow position:
               
chr22:14178626-14178945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
100-420
               

               
Cow position:
               
chr22:29642321-29641996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 164
               

               
Conread position:
               
100-441
               

               
Cow position:
               
chr22:1035613-1035952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
101-261
               

               
Cow position:
               
chr22:1074474-1074304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
101-298
               

               
Cow position:
               
chr22:26417486-26417287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
100, 190
               

               
Conread position:
               
101-317
               

               
Cow position:
               
chr22:2876594-2876817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
101-334
               

               
Cow position:
               
chr22:5712790-5712554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
101-360
               

               
Cow position:
               
chr22:7361768-7362043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 149
               

               
Conread position:
               
101-379
               

               
Cow position:
               
chr22:16541443-16541730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
103, 237
               

               
Conread position:
               
101-387
               

               
Cow position:
               
chr22:1858530-1858247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
101-396
               

               
Cow position:
               
chr22:18933506-18933814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
101-420
               

               
Cow position:
               
chr22:18926564-18926236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
101-420
               

               
Cow position:
               
chr22:20627039-20626722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 77
               

               
Conread position:
               
101-420
               

               
Cow position:
               
chr22:27171064-27171374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
101-441
               

               
Cow position:
               
chr22:27819204-27818865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
101-441
               

               
Cow position:
               
chr22:40789762-40789435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
102-335
               

               
Cow position:
               
chr22:10557476-10557242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
86, 20
               

               
Conread position:
               
102-388
               

               
Cow position:
               
chr22:30818415-30818118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
102-419
               

               
Cow position:
               
chr22:38978050-38977729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
6, 70
               

               
Conread position:
               
102-440
               

               
Cow position:
               
chr22:14844749-14844441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
180, 30
               

               
Conread position:
               
104-266
               

               
Cow position:
               
chr22:16140727-16140559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
104-283
               

               
Cow position:
               
chr22:29219698-29219887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
11, 143
               

               
Conread position:
               
104-400
               

               
Cow position:
               
chr22:3534134-3533841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
70, 170
               

               
Conread position:
               
104-413
               

               
Cow position:
               
chr22:30697350-30697048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
104-416
               

               
Cow position:
               
chr22:6852377-6852698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
11, 242
               

               
Conread position:
               
104-420
               

               
Cow position:
               
chr22:16094704-16095020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 7
               

               
Conread position:
               
104-420
               

               
Cow position:
               
chr22:21568194-21567878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
106, 41
               

               
Conread position:
               
104-420
               

               
Cow position:
               
chr22:30269605-30269294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
104-439
               

               
Cow position:
               
chr22:31870052-31870393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 184
               

               
Conread position:
               
106-203
               

               
Cow position:
               
chr22:16797632-16797729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
106-221
               

               
Cow position:
               
chr22:29345789-29345669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
106-264
               

               
Cow position:
               
chr22:13930482-13930317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
106-300
               

               
Cow position:
               
chr22:10682317-10682511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
176, 39
               

               
Conread position:
               
106-304
               

               
Cow position:
               
chr22:2704501-2704298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 190
               

               
Conread position:
               
106-319
               

               
Cow position:
               
chr22:4736228-4736001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
106-326
               

               
Cow position:
               
chr22:1065309-1065077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
10, 164
               

               
Conread position:
               
106-330
               

               
Cow position:
               
chr22:4156614-4156849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
106-334
               

               
Cow position:
               
chr22:23265446-23265689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
106-334
               

               
Cow position:
               
chr22:40870030-40869797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
106-387
               

               
Cow position:
               
chr22:12749711-12749985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
106-403
               

               
Cow position:
               
chr22:23758807-23759115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 228
               

               
Conread position:
               
106-404
               

               
Cow position:
               
chr22:8883212-8882916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 188
               

               
Conread position:
               
106-411
               

               
Cow position:
               
chr22:23804783-23805092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
106-417
               

               
Cow position:
               
chr22:2123492-2123179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 222
               

               
Conread position:
               
106-419
               

               
Cow position:
               
chr22:14091019-14091339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
9, 241
               

               
Conread position:
               
106-419
               

               
Cow position:
               
chr22:39215411-39215733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
103, 234
               

               
Conread position:
               
106-420
               

               
Cow position:
               
chr22:964972-965292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
106-420
               

               
Cow position:
               
chr22:1911851-1911551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
176, 68
               

               
Conread position:
               
106-420
               

               
Cow position:
               
chr22:9372728-9372404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 245
               

               
Conread position:
               
106-420
               

               
Cow position:
               
chr22:12316009-12315693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
106-420
               

               
Cow position:
               
chr22:23831132-23830812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
106-420
               

               
Cow position:
               
chr22:38939750-38940067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
106-421
               

               
Cow position:
               
chr22:43131351-43131673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
6, 255
               

               
Conread position:
               
106-423
               

               
Cow position:
               
chr22:7967897-7967578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
106-428
               

               
Cow position:
               
chr22:644580-644890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
172, 39
               

               
Conread position:
               
106-438
               

               
Cow position:
               
chr22:45132449-45132790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
71, 51
               

               
Conread position:
               
106-440
               

               
Cow position:
               
chr22:14372368-14372050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 180
               

               
Conread position:
               
106-441
               

               
Cow position:
               
chr22:15618808-15618480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
72, 233
               

               
Conread position:
               
106-441
               

               
Cow position:
               
chr22:20331786-20332120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
106-441
               

               
Cow position:
               
chr22:25764291-25764618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 160
               

               
Conread position:
               
106-441
               

               
Cow position:
               
chr22:25943661-25943342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
106-441
               

               
Cow position:
               
chr22:27322499-27322182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
107-291
               

               
Cow position:
               
chr22:14236703-14236886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 37
               

               
Conread position:
               
107-337
               

               
Cow position:
               
chr22:17198338-17198099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
107-368
               

               
Cow position:
               
chr22:13719838-13720092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
107-420
               

               
Cow position:
               
chr22:5837462-5837149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 94
               

               
Conread position:
               
109-283
               

               
Cow position:
               
chr22:30615929-30615748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
109-300
               

               
Cow position:
               
chr22:11497695-11497494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 47
               

               
Conread position:
               
109-331
               

               
Cow position:
               
chr22:18966963-18967191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
109-400
               

               
Cow position:
               
chr22:46610579-46610882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
96, 126
               

               
Conread position:
               
109-404
               

               
Cow position:
               
chr22:23180848-23181143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
109-420
               

               
Cow position:
               
chr22:6215359-6215678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
91, 184
               

               
Conread position:
               
109-424
               

               
Cow position:
               
chr22:25742767-25743075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
109-439
               

               
Cow position:
               
chr22:12829411-12829750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
109-440
               

               
Cow position:
               
chr22:6610160-6610482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
173, 115
               

               
Conread position:
               
109-441
               

               
Cow position:
               
chr22:8418662-8418332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 232
               

               
Conread position:
               
110-417
               

               
Cow position:
               
chr22:30699362-30699063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
178, 77
               

               
Conread position:
               
111-282
               

               
Cow position:
               
chr22:1045992-1046173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
111-298
               

               
Cow position:
               
chr22:11049509-11049321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
111-324
               

               
Cow position:
               
chr22:1714666-1714891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
111-327
               

               
Cow position:
               
chr22:42230325-42230551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
111-329
               

               
Cow position:
               
chr22:11352250-11352483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
111-331
               

               
Cow position:
               
chr22:4054407-4054616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
111-332
               

               
Cow position:
               
chr22:4656850-4657077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
91, 83
               

               
Conread position:
               
111-367
               

               
Cow position:
               
chr22:28672330-28672078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
173, 16
               

               
Conread position:
               
111-397
               

               
Cow position:
               
chr22:5595612-5595904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
94, 164
               

               
Conread position:
               
111-412
               

               
Cow position:
               
chr22:23735816-23736122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
94, 170
               

               
Conread position:
               
111-413
               

               
Cow position:
               
chr22:30607055-30606755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 186
               

               
Conread position:
               
111-420
               

               
Cow position:
               
chr22:2524146-2523845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
148, 67
               

               
Conread position:
               
111-420
               

               
Cow position:
               
chr22:6092467-6092767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
173, 34
               

               
Conread position:
               
111-420
               

               
Cow position:
               
chr22:11766852-11767169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 220
               

               
Conread position:
               
111-420
               

               
Cow position:
               
chr22:40349537-40349231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
83, 163
               

               
Conread position:
               
111-421
               

               
Cow position:
               
chr22:28357223-28356917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
111-421
               

               
Cow position:
               
chr22:29954818-29955119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
111-422
               

               
Cow position:
               
chr22:37030328-37030642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
168, 99
               

               
Conread position:
               
111-428
               

               
Cow position:
               
chr22:15668286-15668600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
111-441
               

               
Cow position:
               
chr22:13286644-13286316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
84, 182
               

               
Conread position:
               
111-441
               

               
Cow position:
               
chr22:16044203-16044555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
67, 243
               

               
Conread position:
               
111-441
               

               
Cow position:
               
chr22:26339960-26339622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
68, 243
               

               
Conread position:
               
111-441
               

               
Cow position:
               
chr22:38438962-38439288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
112-420
               

               
Cow position:
               
chr22:534684-534380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
170, 62
               

               
Conread position:
               
114-322
               

               
Cow position:
               
chr22:14676881-14676660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
114-332
               

               
Cow position:
               
chr22:8540068-8539852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
82, 160
               

               
Conread position:
               
114-441
               

               
Cow position:
               
chr22:5467172-5467508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
174, 61
               

               
Conread position:
               
115-283
               

               
Cow position:
               
chr22:1830235-1830066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
115-283
               

               
Cow position:
               
chr22:14644025-14643854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
86, 155
               

               
Conread position:
               
115-326
               

               
Cow position:
               
chr22:1710726-1710505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 213
               

               
Conread position:
               
115-331
               

               
Cow position:
               
chr22:24282770-24282996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 182
               

               
Conread position:
               
115-352
               

               
Cow position:
               
chr22:23675781-23676017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 186
               

               
Conread position:
               
115-417
               

               
Cow position:
               
chr22:12892169-12892482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 291
               

               
Conread position:
               
115-420
               

               
Cow position:
               
chr22:17581230-17581543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
91, 225
               

               
Conread position:
               
116-332
               

               
Cow position:
               
chr22:3470480-3470253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 61
               

               
Conread position:
               
116-387
               

               
Cow position:
               
chr22:530387-530653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
61, 156
               

               
Conread position:
               
116-404
               

               
Cow position:
               
chr22:6600484-6600784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
117-441
               

               
Cow position:
               
chr22:1849265-1848930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
117-441
               

               
Cow position:
               
chr22:12389292-12388956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 231
               

               
Conread position:
               
118-441
               

               
Cow position:
               
chr22:13669978-13670308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 112
               

               
Conread position:
               
120-441
               

               
Cow position:
               
chr22:21325549-21325868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
122-330
               

               
Cow position:
               
chr22:16806772-16806563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 110
               

               
Conread position:
               
123-305
               

               
Cow position:
               
chr22:6793696-6793877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
123-319
               

               
Cow position:
               
chr22:2644117-2643909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
60, 183
               

               
Conread position:
               
123-325
               

               
Cow position:
               
chr22:29842537-29842731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
159, 60
               

               
Conread position:
               
123-327
               

               
Cow position:
               
chr22:16724504-16724716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
123-408
               

               
Cow position:
               
chr22:9597401-9597688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 92
               

               
Conread position:
               
123-416
               

               
Cow position:
               
chr22:14378508-14378794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
84, 149
               

               
Conread position:
               
123-424
               

               
Cow position:
               
chr22:10609541-10609230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
77, 7
               

               
Conread position:
               
123-441
               

               
Cow position:
               
chr22:17126631-17126320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 64
               

               
Conread position:
               
124-300
               

               
Cow position:
               
chr22:8331183-8331000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
81, 6
               

               
Conread position:
               
125-340
               

               
Cow position:
               
chr22:30642951-30643175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
125-420
               

               
Cow position:
               
chr22:30484086-30483798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
164, 53
               

               
Conread position:
               
125-432
               

               
Cow position:
               
chr22:28057860-28058183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
73, 33
               

               
Conread position:
               
126-265
               

               
Cow position:
               
chr22:18441265-18441117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
126-334
               

               
Cow position:
               
chr22:10691417-10691624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
157, 79
               

               
Conread position:
               
128-441
               

               
Cow position:
               
chr22:45513345-45513649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 146
               

               
Conread position:
               
132-386
               

               
Cow position:
               
chr22:10553524-10553770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
150, 35
               

               
Conread position:
               
133-420
               

               
Cow position:
               
chr22:15024935-15025228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
134-393
               

               
Cow position:
               
chr22:43321524-43321256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 100
               

               
Conread position:
               
140-324
               

               
Cow position:
               
chr22:27907709-27907905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
148-330
               

               
Cow position:
               
chr22:3909092-3908898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
149-390
               

               
Cow position:
               
chr22:24915997-24915748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
150-420
               

               
Cow position:
               
chr22:30515405-30515133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
89, 44
               

               
Conread position:
               
165-441
               

               
Cow position:
               
chr22:877654-877379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
36, 181
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chr22:13769612-13769373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
171-441
               

               
Cow position:
               
chr22:23403513-23403781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
177-420
               

               
Cow position:
               
chr22:37324666-37324426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 62
               

               
Conread position:
               
177-441
               

               
Cow position:
               
chr22:27328766-27329026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
178-440
               

               
Cow position:
               
chr22:12967946-12968204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 110
               

               
Conread position:
               
178-440
               

               
Cow position:
               
chr22:31154075-31153823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
183-416
               

               
Cow position:
               
chr22:10421148-10420916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
183-418
               

               
Cow position:
               
chr22:27741007-27740777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
102, 28
               

               
Conread position:
               
183-439
               

               
Cow position:
               
chr22:10919728-10919992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 161
               

               
Conread position:
               
197-441
               

               
Cow position:
               
chr22:24734214-24734446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
200-367
               

               
Cow position:
               
chr22:28704285-28704118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
68, 63
               

               
Conread position:
               
200-420
               

               
Cow position:
               
chr22:2502926-2502717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 131
               

               
Conread position:
               
200-420
               

               
Cow position:
               
chr22:3950353-3950133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
88, 69
               

               
Conread position:
               
200-420
               

               
Cow position:
               
chr22:17814333-17814107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
200-420
               

               
Cow position:
               
chr22:26184060-26184281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 131
               

               
Conread position:
               
200-420
               

               
Cow position:
               
chr22:44180694-44180473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 132
               

               
Conread position:
               
200-423
               

               
Cow position:
               
chr22:8115987-8116209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 120
               

               
Conread position:
               
200-425
               

               
Cow position:
               
chr22:1279284-1279510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
84, 117
               

               
Conread position:
               
200-439
               

               
Cow position:
               
chr22:15020312-15020534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
200-440
               

               
Cow position:
               
chr22:23176340-23176574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 123
               

               
Conread position:
               
200-441
               

               
Cow position:
               
chr22:2627681-2627433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 136
               

               
Conread position:
               
200-441
               

               
Cow position:
               
chr22:7852065-7851829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 132
               

               
Conread position:
               
200-441
               

               
Cow position:
               
chr22:17125683-17125447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
200-441
               

               
Cow position:
               
chr22:23857147-23856915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 128
               

               
Conread position:
               
200-441
               

               
Cow position:
               
chr22:34475899-34476142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
200-441
               

               
Cow position:
               
chr22:34712826-34712583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
203-390
               

               
Cow position:
               
chr22:18293667-18293850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
81, 92
               

               
Conread position:
               
205-381
               

               
Cow position:
               
chr22:29344974-29344798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
78, 133
               

               
Conread position:
               
207-397
               

               
Cow position:
               
chr22:28290212-28290024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
75, 131
               

               
Conread position:
               
208-412
               

               
Cow position:
               
chr22:34398363-34398568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 124
               

               
Conread position:
               
208-418
               

               
Cow position:
               
chr22:1265831-1266045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
210-441
               

               
Cow position:
               
chr22:27835625-27835396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
8, 54
               

               
Conread position:
               
211-420
               

               
Cow position:
               
chr22:1975699-1975493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
215-441
               

               
Cow position:
               
chr22:43291816-43292031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 48
               
Show alignments to all cow chromosomes.