Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rfhi4027b_a6.5
        

               Conread position:
               77-428
               

               Cow position:
               chr4:12590996-12591344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               79-420
               

               Cow position:
               chr4:14994399-14994031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 329
               

               Conread position:
               82-425
               

               Cow position:
               chr4:55508040-55508368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 95
               

               Conread position:
               86-264
               

               Cow position:
               chr4:61451434-61451246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               86-275
               

               Cow position:
               chr4:65291647-65291834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               62, 110
               

               Conread position:
               86-428
               

               Cow position:
               chr4:508692-509033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               87-388
               

               Cow position:
               chr4:38822106-38822409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               111, 23
               

               Conread position:
               87-424
               

               Cow position:
               chr4:53126322-53125990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 40
               

               Conread position:
               88-264
               

               Cow position:
               chr4:17076061-17076246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 151
               

               Conread position:
               88-416
               

               Cow position:
               chr4:47731077-47730738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               88-420
               

               Cow position:
               chr4:19314204-19313888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               88-420
               

               Cow position:
               chr4:20026890-20027223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 132
               

               Conread position:
               88-442
               

               Cow position:
               chr4:25197275-25197636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 247
               

               Conread position:
               89-197
               

               Cow position:
               chr4:5904724-5904615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               89-264
               

               Cow position:
               chr4:16636863-16637042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               119, 72
               

               Conread position:
               89-264
               

               Cow position:
               chr4:56756071-56755887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               89-284
               

               Cow position:
               chr4:30172013-30172215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 52
               

               Conread position:
               89-284
               

               Cow position:
               chr4:45484015-45483811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               104, 16
               

               Conread position:
               90-269
               

               Cow position:
               chr4:12748208-12748385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               27, 116
               

               Conread position:
               90-319
               

               Cow position:
               chr4:46560393-46560155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 95
               

               Conread position:
               90-329
               

               Cow position:
               chr4:64029304-64029083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               200, 21
               

               Conread position:
               90-385
               

               Cow position:
               chr4:63471877-63472162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               91-259
               

               Cow position:
               chr4:53050206-53050030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               24, 15
               

               Conread position:
               91-264
               

               Cow position:
               chr4:36058259-36058074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               91-275
               

               Cow position:
               chr4:44681048-44681230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 75
               

               Conread position:
               91-278
               

               Cow position:
               chr4:59755441-59755625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               180, 20
               

               Conread position:
               91-282
               

               Cow position:
               chr4:23271496-23271297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               5, 82
               

               Conread position:
               91-283
               

               Cow position:
               chr4:11186176-11185977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               114, 19
               

               Conread position:
               91-284
               

               Cow position:
               chr4:19349683-19349493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 92
               

               Conread position:
               91-284
               

               Cow position:
               chr4:30648056-30647866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               111, 28
               

               Conread position:
               91-284
               

               Cow position:
               chr4:65108742-65108544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               132, 56
               

               Conread position:
               91-286
               

               Cow position:
               chr4:617166-617367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               116, 186
               

               Conread position:
               91-286
               

               Cow position:
               chr4:23757983-23757779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               113, 148
               

               Conread position:
               91-307
               

               Cow position:
               chr4:8083597-8083812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               194, 91
               

               Conread position:
               91-331
               

               Cow position:
               chr4:38209764-38210012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               111, 150
               

               Conread position:
               91-386
               

               Cow position:
               chr4:19292927-19292631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 118
               

               Conread position:
               91-404
               

               Cow position:
               chr4:61066960-61066667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               237, 15
               

               Conread position:
               91-413
               

               Cow position:
               chr4:38156886-38157207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 13
               

               Conread position:
               91-417
               

               Cow position:
               chr4:23846842-23847168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               22, 248
               

               Conread position:
               91-420
               

               Cow position:
               chr4:13326744-13327076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               91-420
               

               Cow position:
               chr4:25227144-25226826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               203, 24
               

               Conread position:
               91-420
               

               Cow position:
               chr4:68076328-68076652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               117, 77
               

               Conread position:
               91-426
               

               Cow position:
               chr4:13668405-13668753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               27, 250
               

               Conread position:
               91-439
               

               Cow position:
               chr4:54938091-54937752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               180, 56
               

               Conread position:
               91-441
               

               Cow position:
               chr4:4084248-4084586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               108, 19
               

               Conread position:
               91-441
               

               Cow position:
               chr4:20327513-20327848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 20
               

               Conread position:
               92-206
               

               Cow position:
               chr4:42672422-42672535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               96, 13
               

               Conread position:
               92-280
               

               Cow position:
               chr4:28660338-28660534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               92-280
               

               Cow position:
               chr4:41099142-41098952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               109, 16
               

               Conread position:
               92-284
               

               Cow position:
               chr4:2713647-2713848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               92-284
               

               Cow position:
               chr4:3299590-3299777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               100, 18
               

               Conread position:
               92-286
               

               Cow position:
               chr4:5629322-5629528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               92-319
               

               Cow position:
               chr4:6072841-6073074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               105, 183
               

               Conread position:
               92-403
               

               Cow position:
               chr4:30778609-30778935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               34, 262
               

               Conread position:
               92-425
               

               Cow position:
               chr4:18756648-18756305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               31, 52
               

               Conread position:
               92-440
               

               Cow position:
               chr4:22073109-22073453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               93-245
               

               Cow position:
               chr4:20471091-20470930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               7, 52
               

               Conread position:
               93-253
               

               Cow position:
               chr4:69478435-69478283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               93-261
               

               Cow position:
               chr4:27691462-27691637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               112, 23
               

               Conread position:
               93-261
               

               Cow position:
               chr4:45801729-45801551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               93-284
               

               Cow position:
               chr4:43909972-43909774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               112, 21
               

               Conread position:
               93-284
               

               Cow position:
               chr4:51083131-51083325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 139
               

               Conread position:
               93-285
               

               Cow position:
               chr4:45840601-45840410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               93-291
               

               Cow position:
               chr4:16118519-16118723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               114, 60
               

               Conread position:
               93-318
               

               Cow position:
               chr4:13919188-13918957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               43, 36
               

               Conread position:
               93-320
               

               Cow position:
               chr4:56746203-56745965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               93-322
               

               Cow position:
               chr4:68491222-68490979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               97, 52
               

               Conread position:
               93-327
               

               Cow position:
               chr4:40995945-40995698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 184
               

               Conread position:
               93-332
               

               Cow position:
               chr4:47305290-47305039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               93-403
               

               Cow position:
               chr4:33100595-33100920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               10, 77
               

               Conread position:
               93-404
               

               Cow position:
               chr4:37675837-37675508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               93-420
               

               Cow position:
               chr4:3283245-3283570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               55, 113
               

               Conread position:
               93-420
               

               Cow position:
               chr4:25356118-25356430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               93-421
               

               Cow position:
               chr4:3688135-3687797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               107, 17
               

               Conread position:
               93-421
               

               Cow position:
               chr4:42673389-42673049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 258
               

               Conread position:
               93-422
               

               Cow position:
               chr4:52780054-52779726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               79, 43
               

               Conread position:
               94-194
               

               Cow position:
               chr4:8133089-8133191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               94-277
               

               Cow position:
               chr4:46234954-46235140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               94-286
               

               Cow position:
               chr4:26332991-26333185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               94-286
               

               Cow position:
               chr4:26335158-26335352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               94-300
               

               Cow position:
               chr4:17790088-17790298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               109, 57
               

               Conread position:
               94-372
               

               Cow position:
               chr4:47038976-47038691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               94-417
               

               Cow position:
               chr4:51851420-51851086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               94-419
               

               Cow position:
               chr4:59785526-59785196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 20
               

               Conread position:
               94-420
               

               Cow position:
               chr4:29291711-29291396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               199, 16
               

               Conread position:
               94-421
               

               Cow position:
               chr4:37935096-37935410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               189, 16
               

               Conread position:
               94-439
               

               Cow position:
               chr4:24371645-24371996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               22, 243
               

               Conread position:
               94-440
               

               Cow position:
               chr4:29107123-29106766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               13, 258
               

               Conread position:
               94-441
               

               Cow position:
               chr4:20124758-20125128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               15, 312
               

               Conread position:
               95-205
               

               Cow position:
               chr4:45660801-45660912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               95-205
               

               Cow position:
               chr4:46176088-46176198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-275
               

               Cow position:
               chr4:19200313-19200134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               106, 53
               

               Conread position:
               95-283
               

               Cow position:
               chr4:53602007-53601822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               95-284
               

               Cow position:
               chr4:35974575-35974375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               95-301
               

               Cow position:
               chr4:16070478-16070680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               199, 48
               

               Conread position:
               95-316
               

               Cow position:
               chr4:39847941-39847706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               24, 156
               

               Conread position:
               95-324
               

               Cow position:
               chr4:54390807-54391048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               95-331
               

               Cow position:
               chr4:7964440-7964685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               95-403
               

               Cow position:
               chr4:48770781-48770465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               21, 146
               

               Conread position:
               95-404
               

               Cow position:
               chr4:2774930-2774610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               109, 257
               

               Conread position:
               95-409
               

               Cow position:
               chr4:22101057-22101372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               109, 18
               

               Conread position:
               95-412
               

               Cow position:
               chr4:16513321-16513635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               97, 26
               

               Conread position:
               95-417
               

               Cow position:
               chr4:23646659-23646962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               19, 92
               

               Conread position:
               95-420
               

               Cow position:
               chr4:21065232-21064913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               204, 83
               

               Conread position:
               95-420
               

               Cow position:
               chr4:36290829-36290505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               106, 240
               

               Conread position:
               95-441
               

               Cow position:
               chr4:2894246-2893886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               20, 343
               

               Conread position:
               95-441
               

               Cow position:
               chr4:9925431-9925770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               14, 46
               

               Conread position:
               96-180
               

               Cow position:
               chr4:5637592-5637507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               96-202
               

               Cow position:
               chr4:43709947-43710056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               96-203
               

               Cow position:
               chr4:55675151-55675259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               96-204
               

               Cow position:
               chr4:47035514-47035623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               96-204
               

               Cow position:
               chr4:47451687-47451576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               96-205
               

               Cow position:
               chr4:64336070-64336181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               96-238
               

               Cow position:
               chr4:9805802-9805940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               96-252
               

               Cow position:
               chr4:63198161-63198327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               82, 14
               

               Conread position:
               96-259
               

               Cow position:
               chr4:30944159-30943992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               104, 15
               

               Conread position:
               96-264
               

               Cow position:
               chr4:25929417-25929249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               96-264
               

               Cow position:
               chr4:59557648-59557473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               96-276
               

               Cow position:
               chr4:20282444-20282262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               109, 13
               

               Conread position:
               96-277
               

               Cow position:
               chr4:40393016-40392835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               81, 15
               

               Conread position:
               96-278
               

               Cow position:
               chr4:3519625-3519440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               96-281
               

               Cow position:
               chr4:22849294-22849475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 88
               

               Conread position:
               96-282
               

               Cow position:
               chr4:56236345-56236537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               96-283
               

               Cow position:
               chr4:3879324-3879128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               96-283
               

               Cow position:
               chr4:8352358-8352552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               107, 15
               

               Conread position:
               96-283
               

               Cow position:
               chr4:46669189-46668990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               92, 73
               

               Conread position:
               96-283
               

               Cow position:
               chr4:59001932-59002125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               87, 173
               

               Conread position:
               96-284
               

               Cow position:
               chr4:5250395-5250200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               109, 14
               

               Conread position:
               96-284
               

               Cow position:
               chr4:27657178-27656990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               96, 171
               

               Conread position:
               96-284
               

               Cow position:
               chr4:50718997-50718802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               79, 164
               

               Conread position:
               96-284
               

               Cow position:
               chr4:56853060-56852863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               96-284
               

               Cow position:
               chr4:63146659-63146465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               103, 164
               

               Conread position:
               96-286
               

               Cow position:
               chr4:13372207-13372009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               96-286
               

               Cow position:
               chr4:35578727-35578926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               96-286
               

               Cow position:
               chr4:36876652-36876847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               96-289
               

               Cow position:
               chr4:59074531-59074732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               19, 190
               

               Conread position:
               96-294
               

               Cow position:
               chr4:348225-348421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               96-298
               

               Cow position:
               chr4:63078434-63078222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 201
               

               Conread position:
               96-300
               

               Cow position:
               chr4:47230790-47231000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               110, 51
               

               Conread position:
               96-300
               

               Cow position:
               chr4:47283805-47284015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               110, 51
               

               Conread position:
               96-302
               

               Cow position:
               chr4:35291229-35291016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               61, 198
               

               Conread position:
               96-304
               

               Cow position:
               chr4:43579210-43579421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 20
               

               Conread position:
               96-307
               

               Cow position:
               chr4:61998993-61999215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               100, 15
               

               Conread position:
               96-311
               

               Cow position:
               chr4:38949321-38949550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               16, 207
               

               Conread position:
               96-319
               

               Cow position:
               chr4:19539028-19539262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               92, 14
               

               Conread position:
               96-319
               

               Cow position:
               chr4:45212977-45213215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               96-320
               

               Cow position:
               chr4:50178631-50178853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               15, 89
               

               Conread position:
               96-320
               

               Cow position:
               chr4:57566485-57566707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               96-332
               

               Cow position:
               chr4:2681535-2681294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               111, 50
               

               Conread position:
               96-335
               

               Cow position:
               chr4:15871534-15871772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               20, 103
               

               Conread position:
               96-367
               

               Cow position:
               chr4:41186195-41186458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               188, 108
               

               Conread position:
               96-368
               

               Cow position:
               chr4:47748619-47748344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               109, 15
               

               Conread position:
               96-388
               

               Cow position:
               chr4:52823195-52823500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               96-389
               

               Cow position:
               chr4:44772830-44773138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               20, 254
               

               Conread position:
               96-394
               

               Cow position:
               chr4:32693997-32693687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               96-399
               

               Cow position:
               chr4:68430355-68430041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 186
               

               Conread position:
               96-404
               

               Cow position:
               chr4:50194901-50194591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 85
               

               Conread position:
               96-412
               

               Cow position:
               chr4:13026500-13026186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               96-420
               

               Cow position:
               chr4:19315796-19316125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 181
               

               Conread position:
               96-420
               

               Cow position:
               chr4:23526903-23526572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               20, 41
               

               Conread position:
               96-420
               

               Cow position:
               chr4:35982203-35981870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               98, 19
               

               Conread position:
               96-420
               

               Cow position:
               chr4:58248612-58248278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               21, 176
               

               Conread position:
               96-420
               

               Cow position:
               chr4:59871685-59871361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               76, 15
               

               Conread position:
               96-420
               

               Cow position:
               chr4:59873634-59873308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               15, 226
               

               Conread position:
               96-420
               

               Cow position:
               chr4:60897088-60897399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               198, 26
               

               Conread position:
               96-421
               

               Cow position:
               chr4:11611071-11610753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               23, 80
               

               Conread position:
               96-423
               

               Cow position:
               chr4:38946425-38946082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 179
               

               Conread position:
               96-424
               

               Cow position:
               chr4:16238961-16239277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               21, 177
               

               Conread position:
               96-441
               

               Cow position:
               chr4:10968193-10968525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               75, 14
               

               Conread position:
               96-441
               

               Cow position:
               chr4:11187657-11187315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               112, 22
               

               Conread position:
               96-441
               

               Cow position:
               chr4:45685661-45685330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               10, 121
               

               Conread position:
               96-441
               

               Cow position:
               chr4:54191307-54190950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               82, 15
               

               Conread position:
               97-284
               

               Cow position:
               chr4:5790851-5790655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               97-284
               

               Cow position:
               chr4:25802900-25802703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               97-286
               

               Cow position:
               chr4:36709230-36709031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               97-301
               

               Cow position:
               chr4:42044768-42044979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               97-327
               

               Cow position:
               chr4:32562038-32561796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               97-329
               

               Cow position:
               chr4:19238423-19238185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               91, 46
               

               Conread position:
               97-330
               

               Cow position:
               chr4:19431485-19431732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               89, 66
               

               Conread position:
               97-330
               

               Cow position:
               chr4:65463309-65463536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               90, 12
               

               Conread position:
               97-332
               

               Cow position:
               chr4:21088662-21088912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               97-332
               

               Cow position:
               chr4:35834266-35834523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               97-332
               

               Cow position:
               chr4:38349988-38350238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 175
               

               Conread position:
               97-339
               

               Cow position:
               chr4:31178027-31177781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               106, 86
               

               Conread position:
               97-377
               

               Cow position:
               chr4:18974632-18974345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               97-377
               

               Cow position:
               chr4:45626434-45626703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               97-388
               

               Cow position:
               chr4:10915628-10915934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               91, 14
               

               Conread position:
               97-390
               

               Cow position:
               chr4:48104360-48104658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               101, 82
               

               Conread position:
               97-404
               

               Cow position:
               chr4:41900172-41899874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               97-416
               

               Cow position:
               chr4:10999500-10999822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 204
               

               Conread position:
               97-420
               

               Cow position:
               chr4:12004422-12004102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               97-420
               

               Cow position:
               chr4:17774159-17774477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 65
               

               Conread position:
               97-420
               

               Cow position:
               chr4:23450883-23451218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 264
               

               Conread position:
               97-420
               

               Cow position:
               chr4:52748255-52748581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               12, 58
               

               Conread position:
               97-421
               

               Cow position:
               chr4:48409082-48409392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               191, 11
               

               Conread position:
               97-440
               

               Cow position:
               chr4:19584917-19584571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               97-441
               

               Cow position:
               chr4:34383130-34383485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 145
               

               Conread position:
               97-441
               

               Cow position:
               chr4:62472281-62471934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               105, 64
               

               Conread position:
               98-258
               

               Cow position:
               chr4:2537474-2537318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 85
               

               Conread position:
               98-260
               

               Cow position:
               chr4:65825621-65825789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               98-283
               

               Cow position:
               chr4:63108599-63108795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               109, 146
               

               Conread position:
               98-284
               

               Cow position:
               chr4:63261678-63261483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               98-287
               

               Cow position:
               chr4:49094101-49094280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               98-292
               

               Cow position:
               chr4:21520771-21520581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               108, 42
               

               Conread position:
               98-296
               

               Cow position:
               chr4:39010260-39010050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               98-298
               

               Cow position:
               chr4:9269694-9269887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               98-298
               

               Cow position:
               chr4:30769239-30769035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               10, 148
               

               Conread position:
               98-301
               

               Cow position:
               chr4:16091115-16091319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               100, 12
               

               Conread position:
               98-308
               

               Cow position:
               chr4:19496704-19496480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               98-308
               

               Cow position:
               chr4:51986370-51986593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               98-325
               

               Cow position:
               chr4:5577011-5577242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               109, 22
               

               Conread position:
               98-332
               

               Cow position:
               chr4:45874257-45874503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 49
               

               Conread position:
               98-338
               

               Cow position:
               chr4:39007699-39007470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 10
               

               Conread position:
               98-400
               

               Cow position:
               chr4:45837424-45837734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               98-402
               

               Cow position:
               chr4:33181748-33181430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               107, 47
               

               Conread position:
               98-412
               

               Cow position:
               chr4:31505813-31506147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               98-413
               

               Cow position:
               chr4:12901333-12901670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               58, 265
               

               Conread position:
               98-420
               

               Cow position:
               chr4:28839813-28839503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               187, 13
               

               Conread position:
               98-420
               

               Cow position:
               chr4:34369261-34369574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               44, 29
               

               Conread position:
               98-420
               

               Cow position:
               chr4:45662312-45662632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               91, 42
               

               Conread position:
               98-440
               

               Cow position:
               chr4:34310260-34310588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               98-441
               

               Cow position:
               chr4:14414150-14414481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               196, 47
               

               Conread position:
               98-441
               

               Cow position:
               chr4:56591250-56590897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               99-204
               

               Cow position:
               chr4:23809600-23809704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               99-204
               

               Cow position:
               chr4:43436467-43436364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               99-205
               

               Cow position:
               chr4:54315019-54315125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-205
               

               Cow position:
               chr4:57589614-57589507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               99-253
               

               Cow position:
               chr4:22164279-22164120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               100, 43
               

               Conread position:
               99-277
               

               Cow position:
               chr4:14131626-14131446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               93, 10
               

               Conread position:
               99-282
               

               Cow position:
               chr4:33389066-33388871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               99-286
               

               Cow position:
               chr4:23326939-23327133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               99-286
               

               Cow position:
               chr4:46258698-46258507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               106, 155
               

               Conread position:
               99-287
               

               Cow position:
               chr4:42080504-42080692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               99-298
               

               Cow position:
               chr4:22482523-22482322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 113
               

               Conread position:
               99-298
               

               Cow position:
               chr4:60527383-60527180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               93, 12
               

               Conread position:
               99-299
               

               Cow position:
               chr4:42373954-42374157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               105, 15
               

               Conread position:
               99-326
               

               Cow position:
               chr4:6093862-6094099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               103, 12
               

               Conread position:
               99-328
               

               Cow position:
               chr4:15236826-15236602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               187, 23
               

               Conread position:
               99-330
               

               Cow position:
               chr4:26959762-26960005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               99-333
               

               Cow position:
               chr4:1645880-1646132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               99-402
               

               Cow position:
               chr4:9444479-9444792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               108, 242
               

               Conread position:
               99-402
               

               Cow position:
               chr4:46566270-46566579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               105, 11
               

               Conread position:
               99-403
               

               Cow position:
               chr4:34165785-34166083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               179, 22
               

               Conread position:
               99-412
               

               Cow position:
               chr4:13256270-13255973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               100, 33
               

               Conread position:
               99-420
               

               Cow position:
               chr4:43515927-43515603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               18, 143
               

               Conread position:
               99-420
               

               Cow position:
               chr4:49794853-49794549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               99-420
               

               Cow position:
               chr4:54335210-54334877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               99-420
               

               Cow position:
               chr4:66547560-66547890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               84, 199
               

               Conread position:
               99-421
               

               Cow position:
               chr4:34641520-34641853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               87, 240
               

               Conread position:
               99-439
               

               Cow position:
               chr4:961463-961800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               185, 16
               

               Conread position:
               99-439
               

               Cow position:
               chr4:11897097-11897435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               12, 164
               

               Conread position:
               99-441
               

               Cow position:
               chr4:12127435-12127780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 94
               

               Conread position:
               99-441
               

               Cow position:
               chr4:18095459-18095812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               80, 10
               

               Conread position:
               99-441
               

               Cow position:
               chr4:22138012-22138370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               255
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               17, 344
               

               Conread position:
               99-441
               

               Cow position:
               chr4:37691108-37691451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               104, 36
               

               Conread position:
               99-441
               

               Cow position:
               chr4:66256883-66256543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               100-290
               

               Cow position:
               chr4:47125636-47125835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               100-326
               

               Cow position:
               chr4:58018544-58018312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               88, 30
               

               Conread position:
               100-349
               

               Cow position:
               chr4:42231831-42232076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               88, 62
               

               Conread position:
               100-420
               

               Cow position:
               chr4:27530314-27529994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               97, 43
               

               Conread position:
               100-420
               

               Cow position:
               chr4:41370739-41371064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               101, 231
               

               Conread position:
               100-420
               

               Cow position:
               chr4:54455138-54455466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               12, 137
               

               Conread position:
               100-420
               

               Cow position:
               chr4:56498667-56499002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 152
               

               Conread position:
               100-441
               

               Cow position:
               chr4:19500886-19501222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               88, 59
               

               Conread position:
               100-441
               

               Cow position:
               chr4:23444836-23445191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 142
               

               Conread position:
               101-278
               

               Cow position:
               chr4:50837904-50837720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               101-294
               

               Cow position:
               chr4:46656335-46656133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               98, 197
               

               Conread position:
               101-314
               

               Cow position:
               chr4:21112371-21112588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               14, 145
               

               Conread position:
               101-331
               

               Cow position:
               chr4:13344737-13344501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               101-420
               

               Cow position:
               chr4:1015272-1014945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               94, 135
               

               Conread position:
               101-420
               

               Cow position:
               chr4:16762519-16762848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               85, 8
               

               Conread position:
               101-420
               

               Cow position:
               chr4:30974533-30974217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               76, 9
               

               Conread position:
               101-420
               

               Cow position:
               chr4:44613206-44612881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               104, 245
               

               Conread position:
               101-420
               

               Cow position:
               chr4:68569443-68569775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               103, 138
               

               Conread position:
               101-422
               

               Cow position:
               chr4:45250174-45249850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               105, 47
               

               Conread position:
               101-437
               

               Cow position:
               chr4:7043615-7043963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               15, 258
               

               Conread position:
               101-437
               

               Cow position:
               chr4:13284586-13284244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               17, 157
               

               Conread position:
               101-441
               

               Cow position:
               chr4:22713295-22713629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               90, 19
               

               Conread position:
               101-444
               

               Cow position:
               chr4:12474053-12473704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               253
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               17, 157
               

               Conread position:
               102-282
               

               Cow position:
               chr4:4647602-4647414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               102-292
               

               Cow position:
               chr4:30691201-30691007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               91, 9
               

               Conread position:
               102-307
               

               Cow position:
               chr4:12867301-12867096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               102-381
               

               Cow position:
               chr4:44496564-44496286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               12, 86
               

               Conread position:
               102-420
               

               Cow position:
               chr4:20147385-20147062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               102, 242
               

               Conread position:
               102-441
               

               Cow position:
               chr4:49629686-49629345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               72, 243
               

               Conread position:
               103-379
               

               Cow position:
               chr4:45076880-45077160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               85, 240
               

               Conread position:
               103-414
               

               Cow position:
               chr4:45725063-45724759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               96, 117
               

               Conread position:
               103-441
               

               Cow position:
               chr4:26401144-26400822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               38, 29
               

               Conread position:
               104-284
               

               Cow position:
               chr4:19543140-19542949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               99, 7
               

               Conread position:
               104-308
               

               Cow position:
               chr4:67393294-67393077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               104-420
               

               Cow position:
               chr4:12031047-12030724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               98, 138
               

               Conread position:
               104-420
               

               Cow position:
               chr4:36929495-36929194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 80
               

               Conread position:
               104-420
               

               Cow position:
               chr4:38944060-38944384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               90, 231
               

               Conread position:
               105-337
               

               Cow position:
               chr4:43542285-43542514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               99, 126
               

               Conread position:
               105-420
               

               Cow position:
               chr4:13693475-13693797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               11, 231
               

               Conread position:
               105-442
               

               Cow position:
               chr4:38935555-38935217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               78, 41
               

               Conread position:
               106-258
               

               Cow position:
               chr4:59105489-59105644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               106-269
               

               Cow position:
               chr4:8675563-8675397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 153
               

               Conread position:
               106-281
               

               Cow position:
               chr4:66509822-66509652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               165, 72
               

               Conread position:
               106-282
               

               Cow position:
               chr4:12245409-12245227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 151
               

               Conread position:
               106-283
               

               Cow position:
               chr4:14063100-14063270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               106-287
               

               Cow position:
               chr4:12052141-12052315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               96, 85
               

               Conread position:
               106-296
               

               Cow position:
               chr4:53347784-53347972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               106-300
               

               Cow position:
               chr4:23943446-23943648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 191
               

               Conread position:
               106-300
               

               Cow position:
               chr4:37985926-37985726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 125
               

               Conread position:
               106-300
               

               Cow position:
               chr4:50687668-50687863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               7, 137
               

               Conread position:
               106-301
               

               Cow position:
               chr4:42347684-42347477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               106-317
               

               Cow position:
               chr4:27521757-27521530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               10, 174
               

               Conread position:
               106-321
               

               Cow position:
               chr4:61608771-61608992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               106-333
               

               Cow position:
               chr4:7698462-7698227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               9, 154
               

               Conread position:
               106-349
               

               Cow position:
               chr4:38358629-38358876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               101, 13
               

               Conread position:
               106-359
               

               Cow position:
               chr4:19199086-19199353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 225
               

               Conread position:
               106-404
               

               Cow position:
               chr4:56239668-56239962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               97, 29
               

               Conread position:
               106-412
               

               Cow position:
               chr4:27632638-27632335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               225
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               9, 40
               

               Conread position:
               106-416
               

               Cow position:
               chr4:16881177-16881482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               168, 37
               

               Conread position:
               106-417
               

               Cow position:
               chr4:51728270-51727956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               182, 225
               

               Conread position:
               106-418
               

               Cow position:
               chr4:570985-570675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 61
               

               Conread position:
               106-420
               

               Cow position:
               chr4:12676991-12676682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               97, 76
               

               Conread position:
               106-420
               

               Cow position:
               chr4:15635254-15635572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               106-420
               

               Cow position:
               chr4:43894613-43894934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               69, 235
               

               Conread position:
               106-426
               

               Cow position:
               chr4:32458660-32458993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               96, 133
               

               Conread position:
               106-439
               

               Cow position:
               chr4:27665214-27664873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               9, 255
               

               Conread position:
               106-440
               

               Cow position:
               chr4:2885348-2885682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               106-441
               

               Cow position:
               chr4:37732283-37732626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               99, 235
               

               Conread position:
               107-302
               

               Cow position:
               chr4:61214661-61214860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               95, 86
               

               Conread position:
               107-391
               

               Cow position:
               chr4:66380140-66380437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               109-205
               

               Cow position:
               chr4:33273152-33273248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               109-284
               

               Cow position:
               chr4:66168145-66168320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               109-320
               

               Cow position:
               chr4:31594566-31594788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               98, 146
               

               Conread position:
               109-420
               

               Cow position:
               chr4:62317640-62317322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               98, 36
               

               Conread position:
               109-441
               

               Cow position:
               chr4:2099824-2099495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               97, 7
               

               Conread position:
               110-420
               

               Cow position:
               chr4:19745062-19744762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 102
               

               Conread position:
               110-420
               

               Cow position:
               chr4:21531448-21531767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               95, 165
               

               Conread position:
               110-420
               

               Cow position:
               chr4:34631099-34630771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               107, 315
               

               Conread position:
               111-218
               

               Cow position:
               chr4:49410805-49410694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               111-260
               

               Cow position:
               chr4:51617805-51617962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               111-264
               

               Cow position:
               chr4:2770262-2770106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               111-276
               

               Cow position:
               chr4:48239157-48239331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               96, 30
               

               Conread position:
               111-284
               

               Cow position:
               chr4:45964081-45963896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               111-286
               

               Cow position:
               chr4:45588240-45588420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               84, 12
               

               Conread position:
               111-299
               

               Cow position:
               chr4:61391044-61391228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 11
               

               Conread position:
               111-300
               

               Cow position:
               chr4:23059661-23059858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               81, 184
               

               Conread position:
               111-301
               

               Cow position:
               chr4:34234654-34234468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               74, 32
               

               Conread position:
               111-301
               

               Cow position:
               chr4:58045441-58045640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               94, 160
               

               Conread position:
               111-301
               

               Cow position:
               chr4:60955512-60955324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               183, 19
               

               Conread position:
               111-303
               

               Cow position:
               chr4:59015771-59015583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               183, 42
               

               Conread position:
               111-334
               

               Cow position:
               chr4:46883476-46883713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               111-385
               

               Cow position:
               chr4:59055680-59055952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               177, 34
               

               Conread position:
               111-404
               

               Cow position:
               chr4:46136940-46136644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               92, 224
               

               Conread position:
               111-409
               

               Cow position:
               chr4:56005947-56005652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               91, 185
               

               Conread position:
               111-410
               

               Cow position:
               chr4:49019507-49019801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               174, 83
               

               Conread position:
               111-417
               

               Cow position:
               chr4:19435440-19435139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               81, 29
               

               Conread position:
               111-417
               

               Cow position:
               chr4:45636363-45636044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               35, 231
               

               Conread position:
               111-418
               

               Cow position:
               chr4:31348009-31348309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               173, 76
               

               Conread position:
               111-420
               

               Cow position:
               chr4:1985842-1985520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               94, 292
               

               Conread position:
               111-420
               

               Cow position:
               chr4:15905297-15904975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               93, 221
               

               Conread position:
               111-420
               

               Cow position:
               chr4:28836722-28836412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               93, 19
               

               Conread position:
               111-423
               

               Cow position:
               chr4:202952-203268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               92, 39
               

               Conread position:
               111-441
               

               Cow position:
               chr4:47262728-47262394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               94, 256
               

               Conread position:
               111-441
               

               Cow position:
               chr4:48322228-48321886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               66, 275
               

               Conread position:
               112-300
               

               Cow position:
               chr4:3853669-3853471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               112-416
               

               Cow position:
               chr4:1419414-1419103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               85, 59
               

               Conread position:
               113-305
               

               Cow position:
               chr4:55694359-55694169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               63, 87
               

               Conread position:
               113-308
               

               Cow position:
               chr4:27699229-27699018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               113-367
               

               Cow position:
               chr4:19709132-19708860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               113-403
               

               Cow position:
               chr4:24092942-24093246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               91, 239
               

               Conread position:
               113-427
               

               Cow position:
               chr4:25354717-25354403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               85, 181
               

               Conread position:
               114-332
               

               Cow position:
               chr4:46383177-46383408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               115-264
               

               Cow position:
               chr4:66412370-66412219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               115-271
               

               Cow position:
               chr4:50131709-50131542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               115-274
               

               Cow position:
               chr4:48693782-48693621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               115-284
               

               Cow position:
               chr4:34722697-34722874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               92, 160
               

               Conread position:
               115-304
               

               Cow position:
               chr4:29843006-29842820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 92
               

               Conread position:
               115-327
               

               Cow position:
               chr4:14020686-14020467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               90, 155
               

               Conread position:
               115-333
               

               Cow position:
               chr4:19485492-19485258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               115-338
               

               Cow position:
               chr4:29384054-29384276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               175, 83
               

               Conread position:
               115-368
               

               Cow position:
               chr4:62370496-62370246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               107, 63
               

               Conread position:
               115-381
               

               Cow position:
               chr4:3837455-3837188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               67, 50
               

               Conread position:
               115-389
               

               Cow position:
               chr4:19102689-19102977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               68, 211
               

               Conread position:
               115-412
               

               Cow position:
               chr4:46494488-46494181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               115-420
               

               Cow position:
               chr4:13221993-13222305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               48, 218
               

               Conread position:
               115-420
               

               Cow position:
               chr4:46527191-46526874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               82, 188
               

               Conread position:
               115-436
               

               Cow position:
               chr4:34699857-34700179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               133, 68
               

               Conread position:
               115-441
               

               Cow position:
               chr4:27276358-27276684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               115-441
               

               Cow position:
               chr4:54871836-54872165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 182
               

               Conread position:
               116-412
               

               Cow position:
               chr4:44183934-44184228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               77, 49
               

               Conread position:
               116-420
               

               Cow position:
               chr4:40414441-40414751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               10, 237
               

               Conread position:
               116-428
               

               Cow position:
               chr4:13590273-13589957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               67, 217
               

               Conread position:
               116-441
               

               Cow position:
               chr4:23509777-23509454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               87, 29
               

               Conread position:
               117-264
               

               Cow position:
               chr4:60370341-60370496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               117-420
               

               Cow position:
               chr4:37343305-37342993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               85, 123
               

               Conread position:
               117-439
               

               Cow position:
               chr4:29805184-29805506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 159
               

               Conread position:
               120-301
               

               Cow position:
               chr4:27511730-27511537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               120-420
               

               Cow position:
               chr4:4320811-4321123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               81, 73
               

               Conread position:
               121-284
               

               Cow position:
               chr4:34653694-34653856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-441
               

               Cow position:
               chr4:68764700-68764377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               58, 126
               

               Conread position:
               122-418
               

               Cow position:
               chr4:31004232-31004528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               71, 47
               

               Conread position:
               122-420
               

               Cow position:
               chr4:10732401-10732100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               7, 212
               

               Conread position:
               122-441
               

               Cow position:
               chr4:8770274-8769968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               70, 155
               

               Conread position:
               122-441
               

               Cow position:
               chr4:43740711-43740383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               61, 311
               

               Conread position:
               123-299
               

               Cow position:
               chr4:48138123-48137943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 149
               

               Conread position:
               123-419
               

               Cow position:
               chr4:26323923-26323613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               83, 238
               

               Conread position:
               123-441
               

               Cow position:
               chr4:4827312-4826987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               78, 45
               

               Conread position:
               123-441
               

               Cow position:
               chr4:45775151-45775485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               55, 221
               

               Conread position:
               124-340
               

               Cow position:
               chr4:65885680-65885456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               70, 19
               

               Conread position:
               125-420
               

               Cow position:
               chr4:1060102-1060388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               113, 58
               

               Conread position:
               125-441
               

               Cow position:
               chr4:54171802-54171484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               63, 216
               

               Conread position:
               134-420
               

               Cow position:
               chr4:16594244-16593959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               135-330
               

               Cow position:
               chr4:3268203-3268399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 77
               

               Conread position:
               137-420
               

               Cow position:
               chr4:14500079-14500376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               57, 244
               

               Conread position:
               138-441
               

               Cow position:
               chr4:25888679-25888968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               164, 63
               

               Conread position:
               140-377
               

               Cow position:
               chr4:20558526-20558282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 99
               

               Conread position:
               140-416
               

               Cow position:
               chr4:37313333-37313051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 147
               

               Conread position:
               140-416
               

               Cow position:
               chr4:45074220-45073945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               140-426
               

               Cow position:
               chr4:19430526-19430231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               18, 261
               

               Conread position:
               144-441
               

               Cow position:
               chr4:6653882-6653591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               33, 129
               

               Conread position:
               145-384
               

               Cow position:
               chr4:61188709-61188957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               61, 183
               

               Conread position:
               146-419
               

               Cow position:
               chr4:57584082-57584366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               60, 202
               

               Conread position:
               149-439
               

               Cow position:
               chr4:20157271-20157554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               145, 33
               

               Conread position:
               153-441
               

               Cow position:
               chr4:46455916-46456199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 132
               

               Conread position:
               164-428
               

               Cow position:
               chr4:2602374-2602101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 69
               

               Conread position:
               177-388
               

               Cow position:
               chr4:44838766-44838986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               178-420
               

               Cow position:
               chr4:45367857-45367613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               66, 32
               

               Conread position:
               178-429
               

               Cow position:
               chr4:48173258-48173007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 162
               

               Conread position:
               178-441
               

               Cow position:
               chr4:47348942-47348689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               116, 27
               

               Conread position:
               179-420
               

               Cow position:
               chr4:48143956-48143707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               183-420
               

               Cow position:
               chr4:62771804-62772048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 152
               

               Conread position:
               200-332
               

               Cow position:
               chr4:61926594-61926728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               82, 46
               

               Conread position:
               200-420
               

               Cow position:
               chr4:19321981-19322205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               83, 133
               

               Conread position:
               200-420
               

               Cow position:
               chr4:44782471-44782250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               83, 142
               

               Conread position:
               200-420
               

               Cow position:
               chr4:45589504-45589722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               79, 66
               

               Conread position:
               200-420
               

               Cow position:
               chr4:46183510-46183287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 126
               

               Conread position:
               200-420
               

               Cow position:
               chr4:59378006-59377791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               82, 132
               

               Conread position:
               200-420
               

               Cow position:
               chr4:65175048-65175261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               85, 138
               

               Conread position:
               200-424
               

               Cow position:
               chr4:21009-20792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               82, 118
               

               Conread position:
               200-428
               

               Cow position:
               chr4:46591764-46591534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               87, 137
               

               Conread position:
               200-439
               

               Cow position:
               chr4:39128634-39128397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               94, 66
               

               Conread position:
               200-439
               

               Cow position:
               chr4:46597465-46597239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               200-439
               

               Cow position:
               chr4:65950750-65950512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               86, 11
               

               Conread position:
               200-441
               

               Cow position:
               chr4:13941553-13941321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               94, 76
               

               Conread position:
               200-441
               

               Cow position:
               chr4:25879487-25879257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               232, 66
               

               Conread position:
               200-441
               

               Cow position:
               chr4:30792065-30791830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               84, 114
               

               Conread position:
               200-441
               

               Cow position:
               chr4:51784276-51784040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               88, 68
               

               Conread position:
               201-441
               

               Cow position:
               chr4:5460765-5461000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               81, 193
               

               Conread position:
               202-421
               

               Cow position:
               chr4:45738380-45738604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               203-428
               

               Cow position:
               chr4:55395855-55395630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               99, 40
               

               Conread position:
               204-419
               

               Cow position:
               chr4:18107067-18107280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               86, 117
               

               Conread position:
               204-420
               

               Cow position:
               chr4:32726317-32726103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               78, 133
               

               Conread position:
               204-441
               

               Cow position:
               chr4:10056297-10056070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               84, 55
               

               Conread position:
               205-420
               

               Cow position:
               chr4:3850643-3850433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               77, 125
               

               Conread position:
               207-441
               

               Cow position:
               chr4:4843154-4843385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               77, 120
               

               Conread position:
               209-420
               

               Cow position:
               chr4:41300909-41301113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               85, 37
               

               Conread position:
               212-421
               

               Cow position:
               chr4:65432235-65432024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               70, 120
               

               Conread position:
               214-441
               

               Cow position:
               chr4:17474522-17474298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               70, 100
               

               Conread position:
               221-439
               

               Cow position:
               chr4:54930346-54930561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               66, 42
               

               Conread position:
               238-428
               

               Cow position:
               chr4:39231462-39231646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               49, 94
               

               Conread position:
               245-420
               

               Cow position:
               chr4:38705721-38705897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               283-440
               

               Cow position:
               chr4:30929614-30929458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 52
               

               Conread position:
               285-428
               

               Cow position:
               chr4:48137922-48137780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 50
               

               Conread position:
               285-441
               

               Cow position:
               chr4:61214985-61215140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 54
               

               Conread position:
               286-441
               

               Cow position:
               chr4:45483453-45483298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 53
               
Show alignments to all cow chromosomes.
Conread position:	77-428
Cow position:	chr4:12590996-12591344 (view UCSC Genome Browser custom track)
Alignm length:	364
Alignm identity:	257
Alignm E-value:	1.99993e-41
Alignm gaps (pig, cow):	14, 34
Conread position:	79-420
Cow position:	chr4:14994399-14994031 (view UCSC Genome Browser custom track)
Alignm length:	371
Alignm identity:	246
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	33, 329
Conread position:	82-425
Cow position:	chr4:55508040-55508368 (view UCSC Genome Browser custom track)
Alignm length:	348
Alignm identity:	230
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	14, 95
Conread position:	86-264
Cow position:	chr4:61451434-61451246 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	133
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	91, 0
Conread position:	86-275
Cow position:	chr4:65291647-65291834 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	134
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	62, 110
Conread position:	86-428
Cow position:	chr4:508692-509033 (view UCSC Genome Browser custom track)
Alignm length:	357
Alignm identity:	246
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	9, 66
Conread position:	87-388
Cow position:	chr4:38822106-38822409 (view UCSC Genome Browser custom track)
Alignm length:	314
Alignm identity:	217
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	111, 23
Conread position:	87-424
Cow position:	chr4:53126322-53125990 (view UCSC Genome Browser custom track)
Alignm length:	345
Alignm identity:	230
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	55, 40
Conread position:	88-264
Cow position:	chr4:17076061-17076246 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	142
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	20, 151
Conread position:	88-416
Cow position:	chr4:47731077-47730738 (view UCSC Genome Browser custom track)
Alignm length:	343
Alignm identity:	223
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	105, 18
Conread position:	88-420
Cow position:	chr4:19314204-19313888 (view UCSC Genome Browser custom track)
Alignm length:	340
Alignm identity:	234
Alignm E-value:	8e-31
Alignm gaps (pig, cow):	18, 59
Conread position:	88-442
Cow position:	chr4:25197275-25197636 (view UCSC Genome Browser custom track)
Alignm length:	369
Alignm identity:	257
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	16, 247
Conread position:	89-197
Cow position:	chr4:5904724-5904615 (view UCSC Genome Browser custom track)
Alignm length:	110
Alignm identity:	89
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	26, 0
Conread position:	89-264
Cow position:	chr4:16636863-16637042 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	135
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	119, 72
Conread position:	89-284
Cow position:	chr4:30172013-30172215 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	153
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	27, 52
Conread position:	90-269
Cow position:	chr4:12748208-12748385 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	126
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	27, 116
Conread position:	90-319
Cow position:	chr4:46560393-46560155 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	166
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	13, 95
Conread position:	90-329
Cow position:	chr4:64029304-64029083 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	175
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	200, 21
Conread position:	90-385
Cow position:	chr4:63471877-63472162 (view UCSC Genome Browser custom track)
Alignm length:	300
Alignm identity:	194
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	19, 106
Conread position:	91-259
Cow position:	chr4:53050206-53050030 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	134
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	24, 15