Cow genome map
| Conread name: | Ss1.1-rhea11_d17.5 |
| Conread position: | 117-366 |
| Cow position: | chr12:464865-465110 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-366 |
| Cow position: | chr12:10790501-10790746 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-366 |
| Cow position: | chr12:22979148-22979393 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-366 |
| Cow position: | chr12:31027075-31027320 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr12:379222-378970 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr12:1007761-1007506 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 123, 83 |
| Conread position: | 117-374 |
| Cow position: | chr12:1511020-1511275 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr12:7873117-7872862 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr12:12928164-12928420 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 47, 78 |
| Conread position: | 117-374 |
| Cow position: | chr12:13042495-13042750 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr12:14568079-14568334 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr12:14940710-14940455 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr12:15925008-15925263 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr12:25839029-25838774 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr12:32700510-32700255 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 123, 83 |
| Conread position: | 117-374 |
| Cow position: | chr12:36446130-36445875 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 138, 83 |
| Conread position: | 117-374 |
| Cow position: | chr12:39930910-39930655 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-379 |
| Cow position: | chr12:10076403-10076144 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-382 |
| Cow position: | chr12:21665883-21665620 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-394 |
| Cow position: | chr12:25265591-25265862 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 77 |
| Conread position: | 117-400 |
| Cow position: | chr12:21433087-21432808 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 118-374 |
| Cow position: | chr12:9385209-9385465 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 78 |
| Conread position: | 119-366 |
| Cow position: | chr12:550870-551113 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 5, 14 |
| Conread position: | 119-366 |
| Cow position: | chr12:40868076-40867833 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 104, 81 |
| Conread position: | 120-366 |
| Cow position: | chr12:1406189-1405947 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 103, 78 |
| Conread position: | 133-374 |
| Cow position: | chr12:30593381-30593618 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 67 |
| Conread position: | 144-374 |
| Cow position: | chr12:1055791-1056019 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 144-374 |
| Cow position: | chr12:6530310-6530081 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 56 |
| Conread position: | 144-374 |
| Cow position: | chr12:46111399-46111627 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 144-379 |
| Cow position: | chr12:38894081-38893850 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 56 |
| Conread position: | 217-378 |
| Cow position: | chr12:37196660-37196819 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 29, 87 |
Show alignments to all cow chromosomes.