Cow genome map
| Conread name: | Ss1.1-rhea11_d17.5 |
| Conread position: | 117-365 |
| Cow position: | chr16:20259956-20259713 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 176, 89 |
| Conread position: | 117-366 |
| Cow position: | chr16:8646920-8646675 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr16:2426040-2426295 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr16:2947299-2947554 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr16:15813145-15812890 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr16:18650521-18650776 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr16:19777874-19778129 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr16:23654312-23654057 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr16:23877537-23877282 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr16:25329234-25329489 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 121, 77 |
| Conread position: | 117-374 |
| Cow position: | chr16:42211559-42211304 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 123, 83 |
| Conread position: | 117-374 |
| Cow position: | chr16:49094041-49094290 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 222, 81 |
| Conread position: | 117-374 |
| Cow position: | chr16:49097027-49096772 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr16:50190058-50190314 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 117-379 |
| Cow position: | chr16:13721525-13721785 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-379 |
| Cow position: | chr16:45464857-45465117 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 122, 83 |
| Conread position: | 118-366 |
| Cow position: | chr16:54322349-54322592 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 105, 14 |
| Conread position: | 119-329 |
| Cow position: | chr16:38290572-38290779 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 122, 95 |
| Conread position: | 119-366 |
| Cow position: | chr16:41599-41353 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 127, 75 |
| Conread position: | 119-366 |
| Cow position: | chr16:5488932-5488689 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 119, 81 |
| Conread position: | 119-370 |
| Cow position: | chr16:5435886-5435639 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 127, 81 |
| Conread position: | 119-370 |
| Cow position: | chr16:8813044-8813291 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 104, 81 |
| Conread position: | 119-370 |
| Cow position: | chr16:24240340-24240586 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 104, 79 |
| Conread position: | 119-374 |
| Cow position: | chr16:46555482-46555230 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 104, 12 |
| Conread position: | 136-366 |
| Cow position: | chr16:41034345-41034118 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 44 |
| Conread position: | 136-370 |
| Cow position: | chr16:5350464-5350694 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 102, 64 |
| Conread position: | 138-370 |
| Cow position: | chr16:11632802-11633030 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 85, 62 |
| Conread position: | 144-374 |
| Cow position: | chr16:19082082-19081854 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 144-374 |
| Cow position: | chr16:55786537-55786767 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 79, 56 |
| Conread position: | 144-394 |
| Cow position: | chr16:15349130-15349373 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 50 |
| Conread position: | 153-429 |
| Cow position: | chr16:38531156-38531444 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 56, 152 |
| Conread position: | 155-374 |
| Cow position: | chr16:52952215-52952432 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 45 |
Show alignments to all cow chromosomes.