Cow genome map
| Conread name: | Ss1.1-rhea11_d17.5 |
| Conread position: | 117-366 |
| Cow position: | chr24:29083821-29084071 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 60, 128 |
| Conread position: | 117-374 |
| Cow position: | chr24:5929616-5929361 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 111, 83 |
| Conread position: | 117-374 |
| Cow position: | chr24:6325534-6325788 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr24:7596725-7596980 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr24:9901209-9900954 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 117-374 |
| Cow position: | chr24:10035206-10035461 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr24:11104314-11104569 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 83 |
| Conread position: | 117-374 |
| Cow position: | chr24:12293530-12293275 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr24:13236104-13235848 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr24:17161140-17161395 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 77 |
| Conread position: | 117-374 |
| Cow position: | chr24:25372940-25372685 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr24:33639660-33639915 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr24:40427854-40428111 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 7, 85 |
| Conread position: | 117-376 |
| Cow position: | chr24:5990350-5990607 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 111, 83 |
| Conread position: | 117-394 |
| Cow position: | chr24:11748272-11748545 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-394 |
| Cow position: | chr24:14249745-14250020 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 122, 77 |
| Conread position: | 117-401 |
| Cow position: | chr24:2118708-2118427 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 119-370 |
| Cow position: | chr24:14760734-14760487 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 104, 42 |
| Conread position: | 119-370 |
| Cow position: | chr24:35066959-35067206 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 119, 81 |
| Conread position: | 119-374 |
| Cow position: | chr24:13492330-13492073 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 13 |
| Conread position: | 121-428 |
| Cow position: | chr24:29394531-29394843 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 5, 113 |
| Conread position: | 132-366 |
| Cow position: | chr24:36267983-36268213 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 91, 68 |
| Conread position: | 132-374 |
| Cow position: | chr24:32759297-32759537 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 114, 74 |
| Conread position: | 135-418 |
| Cow position: | chr24:6415982-6415691 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 105, 71 |
| Conread position: | 136-366 |
| Cow position: | chr24:11940580-11940354 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 144-374 |
| Cow position: | chr24:11215577-11215805 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 217-428 |
| Cow position: | chr24:39676183-39676395 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 91 |
Show alignments to all cow chromosomes.