Cow genome map
| Conread name: | Ss1.1-rhea11_d17.5 |
| Conread position: | 60-373 |
| Cow position: | chr29:30809329-30809017 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 148 |
| Conread position: | 115-374 |
| Cow position: | chr29:34780218-34780477 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 88 |
| Conread position: | 117-366 |
| Cow position: | chr29:606885-607130 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-366 |
| Cow position: | chr29:42255216-42255461 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr29:1479214-1478959 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 111, 83 |
| Conread position: | 117-374 |
| Cow position: | chr29:2950429-2950174 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr29:4611124-4610869 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr29:10031890-10032146 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr29:15570297-15570041 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr29:15965791-15966046 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr29:19524378-19524632 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr29:21429101-21429356 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr29:24982808-24983063 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 77 |
| Conread position: | 117-374 |
| Cow position: | chr29:27702840-27702585 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 83 |
| Conread position: | 117-374 |
| Cow position: | chr29:38672330-38672586 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 117-409 |
| Cow position: | chr29:21227738-21227452 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 119-366 |
| Cow position: | chr29:7811437-7811678 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 58 |
| Conread position: | 119-366 |
| Cow position: | chr29:40498119-40498362 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 104, 81 |
| Conread position: | 132-374 |
| Cow position: | chr29:38409944-38409705 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 68 |
| Conread position: | 133-421 |
| Cow position: | chr29:16281258-16281551 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 104, 42 |
| Conread position: | 144-374 |
| Cow position: | chr29:15755431-15755659 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 144-374 |
| Cow position: | chr29:16185043-16185271 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 144-374 |
| Cow position: | chr29:19523241-19523013 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 144-374 |
| Cow position: | chr29:31185111-31184884 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 144-374 |
| Cow position: | chr29:32292330-32292102 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 144-379 |
| Cow position: | chr29:21168003-21167771 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 56 |
| Conread position: | 211-419 |
| Cow position: | chr29:13128983-13129190 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 34 |
Show alignments to all cow chromosomes.