Cow genome map
| Conread name: | Ss1.1-rhea11_d17.5 |
| Conread position: | 64-418 |
| Cow position: | chr6:52117583-52117935 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 107 |
| Conread position: | 116-374 |
| Cow position: | chr6:28000674-28000930 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 107, 84 |
| Conread position: | 117-366 |
| Cow position: | chr6:25374387-25374632 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-366 |
| Cow position: | chr6:26771401-26771646 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-366 |
| Cow position: | chr6:27173562-27173317 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-373 |
| Cow position: | chr6:47317467-47317215 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 124, 97 |
| Conread position: | 117-374 |
| Cow position: | chr6:126414-126669 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr6:10044927-10044672 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr6:10536258-10536513 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr6:11020379-11020124 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr6:13307677-13307932 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr6:19719291-19719035 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 79, 60 |
| Conread position: | 117-374 |
| Cow position: | chr6:36258675-36258420 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr6:37388287-37388032 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr6:42481602-42481347 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 83 |
| Conread position: | 117-374 |
| Cow position: | chr6:45723404-45723659 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr6:51869658-51869403 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 106, 77 |
| Conread position: | 117-374 |
| Cow position: | chr6:55239411-55239156 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr6:57521896-57521641 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr6:61051402-61051657 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 123, 83 |
| Conread position: | 117-379 |
| Cow position: | chr6:19707150-19706890 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-379 |
| Cow position: | chr6:28700844-28701104 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 121, 77 |
| Conread position: | 117-408 |
| Cow position: | chr6:19103187-19103472 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-424 |
| Cow position: | chr6:34075597-34075286 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 96, 177 |
| Conread position: | 118-374 |
| Cow position: | chr6:15991227-15991477 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 5, 78 |
| Conread position: | 119-370 |
| Cow position: | chr6:38872809-38873056 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 127, 81 |
| Conread position: | 119-374 |
| Cow position: | chr6:7449213-7448961 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 119, 13 |
| Conread position: | 119-374 |
| Cow position: | chr6:7466933-7467185 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 119, 13 |
| Conread position: | 132-394 |
| Cow position: | chr6:42897896-42897634 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 106, 68 |
| Conread position: | 136-370 |
| Cow position: | chr6:43789666-43789897 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 64 |
| Conread position: | 136-374 |
| Cow position: | chr6:13592017-13591780 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 122, 86 |
| Conread position: | 144-366 |
| Cow position: | chr6:34017030-34017248 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 144-374 |
| Cow position: | chr6:22737012-22737240 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 144-374 |
| Cow position: | chr6:26667331-26667559 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 56 |
| Conread position: | 144-374 |
| Cow position: | chr6:67553926-67553698 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 144-394 |
| Cow position: | chr6:7137648-7137895 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 145-374 |
| Cow position: | chr6:25436073-25436300 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 55 |
| Conread position: | 208-374 |
| Cow position: | chr6:51150577-51150408 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 99 |
Show alignments to all cow chromosomes.