Cow genome map
| Conread name: | Ss1.1-rhea11_d17.5 |
| Conread position: | 60-374 |
| Cow position: | chr8:43850798-43850490 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 93 |
| Conread position: | 60-420 |
| Cow position: | chr8:33094414-33094046 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 257 |
| Conread position: | 109-374 |
| Cow position: | chr8:45567509-45567772 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 116-374 |
| Cow position: | chr8:795210-795465 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 122, 84 |
| Conread position: | 117-357 |
| Cow position: | chr8:22331591-22331828 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-366 |
| Cow position: | chr8:6464152-6464396 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 106, 80 |
| Conread position: | 117-366 |
| Cow position: | chr8:7050852-7051097 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-366 |
| Cow position: | chr8:16384868-16384623 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-366 |
| Cow position: | chr8:60769406-60769651 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-371 |
| Cow position: | chr8:24193530-24193280 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:1508337-1508592 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:1810877-1811132 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:7094254-7094509 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:7607630-7607883 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 106, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:8311512-8311767 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:10752345-10752090 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 60 |
| Conread position: | 117-374 |
| Cow position: | chr8:12077812-12078067 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:13830940-13831194 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 106, 75 |
| Conread position: | 117-374 |
| Cow position: | chr8:13930945-13931200 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 117-374 |
| Cow position: | chr8:16195115-16194860 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:19302224-19301969 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:26879535-26879280 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:30158678-30158424 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 117-374 |
| Cow position: | chr8:31735923-31735668 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:32042784-32042530 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:35989021-35988765 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 98 |
| Conread position: | 117-374 |
| Cow position: | chr8:36665150-36665404 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:39640151-39640406 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:44017201-44016946 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:51403588-51403333 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-374 |
| Cow position: | chr8:60065091-60064838 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 63 |
| Conread position: | 117-383 |
| Cow position: | chr8:53838926-53838665 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 117-394 |
| Cow position: | chr8:1323017-1322742 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 121, 77 |
| Conread position: | 117-394 |
| Cow position: | chr8:41658814-41659089 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 129, 83 |
| Conread position: | 117-417 |
| Cow position: | chr8:50684038-50683743 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 119-366 |
| Cow position: | chr8:60067872-60067629 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 127, 81 |
| Conread position: | 121-379 |
| Cow position: | chr8:7426928-7427181 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 117, 11 |
| Conread position: | 121-379 |
| Cow position: | chr8:14259067-14258812 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 102, 11 |
| Conread position: | 135-399 |
| Cow position: | chr8:33174017-33174279 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 111, 62 |
| Conread position: | 135-418 |
| Cow position: | chr8:12539078-12539363 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 135-432 |
| Cow position: | chr8:38385694-38385400 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 111, 14 |
| Conread position: | 136-366 |
| Cow position: | chr8:39191932-39192158 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 64 |
| Conread position: | 144-366 |
| Cow position: | chr8:476767-476549 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 144-366 |
| Cow position: | chr8:46961989-46961771 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 144-374 |
| Cow position: | chr8:22118489-22118261 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 144-374 |
| Cow position: | chr8:26590861-26591087 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 23 |
| Conread position: | 144-374 |
| Cow position: | chr8:27551712-27551940 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 79, 57 |
| Conread position: | 144-394 |
| Cow position: | chr8:2947221-2947468 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 144-419 |
| Cow position: | chr8:31624862-31624587 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 145-374 |
| Cow position: | chr8:6853158-6852932 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 93, 55 |
| Conread position: | 149-374 |
| Cow position: | chr8:12247250-12247473 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 51 |
| Conread position: | 217-413 |
| Cow position: | chr8:36854227-36854426 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 90 |
Show alignments to all cow chromosomes.