Cow genome map

Conread name: Ss1.1-rhea11_d17.5

Conread position: 60-387
Cow position: chr9:24643694-24643372 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 51, 74

Conread position: 74-374
Cow position: chr9:51592511-51592209 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 231

Conread position: 117-366
Cow position: chr9:9120002-9120246 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 106, 15

Conread position: 117-366
Cow position: chr9:22243022-22243267 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 121, 83

Conread position: 117-366
Cow position: chr9:31416866-31417111 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 121, 83

Conread position: 117-366
Cow position: chr9:47045597-47045352 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 106, 83

Conread position: 117-374
Cow position: chr9:4191967-4191712 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 106, 83

Conread position: 117-374
Cow position: chr9:9611237-9611492 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 106, 83

Conread position: 117-374
Cow position: chr9:10803322-10803067 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 83

Conread position: 117-374
Cow position: chr9:13620347-13620602 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 106, 83

Conread position: 117-374
Cow position: chr9:29516238-29516493 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 16

Conread position: 117-374
Cow position: chr9:39302903-39303158 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 121, 83

Conread position: 117-374
Cow position: chr9:44169681-44169426 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 106, 63

Conread position: 117-374
Cow position: chr9:50002424-50002679 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 83

Conread position: 117-374
Cow position: chr9:56565179-56564924 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 83

Conread position: 117-387
Cow position: chr9:14003626-14003359 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 106, 77

Conread position: 117-388
Cow position: chr9:3997123-3997391 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 106, 83

Conread position: 117-394
Cow position: chr9:28785991-28785718 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 77

Conread position: 117-399
Cow position: chr9:24997001-24996717 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 16

Conread position: 117-419
Cow position: chr9:8727987-8727682 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 201
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 121, 84

Conread position: 117-427
Cow position: chr9:42172367-42172054 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 89, 98

Conread position: 119-366
Cow position: chr9:12285059-12285303 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 119, 81

Conread position: 119-383
Cow position: chr9:9016719-9016461 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 33

Conread position: 119-419
Cow position: chr9:18506181-18506484 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 203
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 104, 81

Conread position: 136-366
Cow position: chr9:42868241-42868467 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 64

Conread position: 144-366
Cow position: chr9:17060735-17060953 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 79, 56

Conread position: 144-374
Cow position: chr9:46683016-46682788 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 94, 56

Conread position: 144-374
Cow position: chr9:47171676-47171448 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 56

Conread position: 145-366
Cow position: chr9:11057305-11057522 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 93, 55

Conread position: 145-374
Cow position: chr9:64011608-64011834 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 93, 49

Conread position: 145-374
Cow position: chr9:64014244-64014470 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 93, 49

Conread position: 227-394
Cow position: chr9:13313101-13312932 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 81

Show alignments to all cow chromosomes.