Cow genome map


           Conread name:
           Ss1.1-rhlv10b_n13.5
        

               Conread position:
               154-350
               

               Cow position:
               chr21:34431383-34431579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               108, 115
               

               Conread position:
               289-448
               

               Cow position:
               chr21:48375161-48375002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               137
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               441-580
               

               Cow position:
               chr21:48374933-48374794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               752-861
               

               Cow position:
               chr21:48374030-48373921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               875-1069
               

               Cow position:
               chr21:48373731-48373535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1064-1268
               

               Cow position:
               chr21:48373458-48373255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               181, 0
               
Show alignments to all cow chromosomes.