Cow genome map


           Conread name:
           Ss1.1-rhlv29b_e16.5
        

               Conread position:
               16-106
               

               Cow position:
               chr5:25659580-25659670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-258
               

               Cow position:
               chr5:25659753-25659911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               147
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               251-425
               

               Cow position:
               chr5:25660388-25660561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               484-603
               

               Cow position:
               chr5:25661808-25661926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               115
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               595-698
               

               Cow position:
               chr5:25663221-25663324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               697-804
               

               Cow position:
               chr5:25663402-25663509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               804-1339
               

               Cow position:
               chr5:25663750-25664286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 180
               
Show alignments to all cow chromosomes.