Cow genome map
| Conread name: | Ss1.1-rhyp01c_d6.5 |
| Conread position: | 55-554 |
| Cow position: | chr10:4663656-4664161 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 55-631 |
| Cow position: | chr10:42672951-42673538 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 61-801 |
| Cow position: | chr10:52421473-52420720 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 18 |
| Conread position: | 62-669 |
| Cow position: | chr10:64323240-64322618 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 162 |
| Conread position: | 156-613 |
| Cow position: | chr10:33445722-33445267 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 216 |
| Conread position: | 157-393 |
| Cow position: | chr10:50565112-50565354 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 5, 45 |
| Conread position: | 163-452 |
| Cow position: | chr10:55305948-55305673 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 149, 26 |
| Conread position: | 166-543 |
| Cow position: | chr10:50703114-50702745 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 198-629 |
| Cow position: | chr10:27249529-27249937 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 268, 179 |
| Conread position: | 225-393 |
| Cow position: | chr10:14606705-14606540 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 248-393 |
| Cow position: | chr10:64093970-64094115 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 408-631 |
| Cow position: | chr10:12537540-12537759 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 133, 122 |
| Conread position: | 408-654 |
| Cow position: | chr10:29495524-29495767 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 133, 86 |
| Conread position: | 410-631 |
| Cow position: | chr10:63378306-63378527 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 160, 70 |
| Conread position: | 411-655 |
| Cow position: | chr10:19651334-19651577 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 134, 27 |
| Conread position: | 412-599 |
| Cow position: | chr10:1861875-1862062 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 42, 166 |
| Conread position: | 419-631 |
| Cow position: | chr10:58840804-58840590 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 142 |
| Conread position: | 419-645 |
| Cow position: | chr10:16804113-16804341 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 117, 155 |
| Conread position: | 419-655 |
| Cow position: | chr10:26023765-26023530 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 126, 28 |
| Conread position: | 420-643 |
| Cow position: | chr10:5863801-5864028 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 132, 171 |
| Conread position: | 420-654 |
| Cow position: | chr10:68370921-68370685 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 125, 155 |
| Conread position: | 421-626 |
| Cow position: | chr10:63029748-63029954 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 124, 128 |
| Conread position: | 421-627 |
| Cow position: | chr10:592582-592784 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 74 |
| Conread position: | 421-631 |
| Cow position: | chr10:63475225-63475423 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 425-588 |
| Cow position: | chr10:14423155-14423317 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 425-631 |
| Cow position: | chr10:3648470-3648674 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 146, 52 |
| Conread position: | 425-655 |
| Cow position: | chr10:8095312-8095080 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 427-655 |
| Cow position: | chr10:34806405-34806626 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 206, 89 |
| Conread position: | 429-655 |
| Cow position: | chr10:15381692-15381463 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 108, 164 |
| Conread position: | 436-631 |
| Cow position: | chr10:10223708-10223516 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 139, 54 |
Show alignments to all cow chromosomes.