Cow genome map


           Conread name:
           Ss1.1-rhyp01c_d6.5
        

               Conread position:
               157-272
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               5, 34
               

               Conread position:
               157-407
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               5, 45
               

               Conread position:
               157-449
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               5, 33
               

               Conread position:
               163-393
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 34
               

               Conread position:
               163-412
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               101, 29
               

               Conread position:
               211-630
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               192, 33
               

               Conread position:
               228-643
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               178, 15
               

               Conread position:
               276-815
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 91
               

               Conread position:
               329-643
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               137, 45
               

               Conread position:
               396-654
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               144, 73
               

               Conread position:
               397-654
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               8, 190
               

               Conread position:
               408-631
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               177, 88
               

               Conread position:
               408-649
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               167, 86
               

               Conread position:
               408-654
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               131, 177
               

               Conread position:
               410-655
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               81, 181
               

               Conread position:
               416-631
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               110, 70
               

               Conread position:
               419-572
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               419-647
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               122, 28
               

               Conread position:
               419-655
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               218, 144
               

               Conread position:
               419-655
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               43, 52
               

               Conread position:
               421-567
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               421-631
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               421-655
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               152, 65
               

               Conread position:
               426-652
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               148, 87
               
Show alignments to all cow chromosomes.