Cow genome map
| Conread name: | Ss1.1-rhyp01c_d6.5 |
| Conread position: | 55-631 |
| Cow position: | chr15:6308896-6309484 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 55-643 |
| Cow position: | chr15:32432980-32432381 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 59-810 |
| Cow position: | chr15:20129266-20128492 (view UCSC Genome Browser custom track) |
| Alignm length: | 786 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 157-452 |
| Cow position: | chr15:13994206-13994489 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 57 |
| Conread position: | 167-622 |
| Cow position: | chr15:37755306-37755766 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 43 |
| Conread position: | 181-427 |
| Cow position: | chr15:22892343-22892577 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 131, 35 |
| Conread position: | 266-655 |
| Cow position: | chr15:33612086-33611682 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 24 |
| Conread position: | 296-654 |
| Cow position: | chr15:1304175-1304523 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 249, 32 |
| Conread position: | 382-655 |
| Cow position: | chr15:18213117-18212841 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 193, 19 |
| Conread position: | 400-655 |
| Cow position: | chr15:15632904-15632656 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 97, 131 |
| Conread position: | 408-627 |
| Cow position: | chr15:42551399-42551620 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 133, 183 |
| Conread position: | 408-631 |
| Cow position: | chr15:8439768-8439544 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 165, 191 |
| Conread position: | 408-631 |
| Cow position: | chr15:16431720-16431942 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 69, 166 |
| Conread position: | 408-631 |
| Cow position: | chr15:34170334-34170549 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 408-631 |
| Cow position: | chr15:42659733-42659958 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 38, 187 |
| Conread position: | 408-650 |
| Cow position: | chr15:32660216-32659980 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 167, 86 |
| Conread position: | 419-627 |
| Cow position: | chr15:19729017-19728812 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 122, 77 |
| Conread position: | 419-631 |
| Cow position: | chr15:51241397-51241188 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 126, 26 |
| Conread position: | 419-655 |
| Cow position: | chr15:17189993-17189756 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 75, 124 |
| Conread position: | 421-570 |
| Cow position: | chr15:3054222-3054371 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 114, 128 |
| Conread position: | 425-653 |
| Cow position: | chr15:45696599-45696366 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 120, 70 |
| Conread position: | 425-654 |
| Cow position: | chr15:44998078-44997845 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 73 |
| Conread position: | 426-655 |
| Cow position: | chr15:12799577-12799355 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 207, 85 |
| Conread position: | 449-655 |
| Cow position: | chr15:35449706-35449496 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 96, 136 |
| Conread position: | 453-643 |
| Cow position: | chr15:8949197-8949006 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 129, 52 |
| Conread position: | 482-655 |
| Cow position: | chr15:14418133-14418304 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 95 |
Show alignments to all cow chromosomes.