Cow genome map


           Conread name:
           Ss1.1-rhyp01c_d6.5
        

               Conread position:
               55-631
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               55-643
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               59-810
               

               Cow position:
               
               

               Alignm length:
               786
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               157-452
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 57
               

               Conread position:
               167-622
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 43
               

               Conread position:
               181-427
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               131, 35
               

               Conread position:
               266-655
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 24
               

               Conread position:
               296-654
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               249
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               249, 32
               

               Conread position:
               382-655
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               193, 19
               

               Conread position:
               400-655
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               97, 131
               

               Conread position:
               408-627
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               133, 183
               

               Conread position:
               408-631
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               165, 191
               

               Conread position:
               408-631
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               69, 166
               

               Conread position:
               408-631
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 21
               

               Conread position:
               408-631
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               38, 187
               

               Conread position:
               408-650
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               167, 86
               

               Conread position:
               419-627
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               122, 77
               

               Conread position:
               419-631
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               126, 26
               

               Conread position:
               419-655
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               75, 124
               

               Conread position:
               421-570
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               114, 128
               

               Conread position:
               425-653
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               120, 70
               

               Conread position:
               425-654
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 73
               

               Conread position:
               426-655
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               207, 85
               

               Conread position:
               449-655
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               96, 136
               

               Conread position:
               453-643
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               129, 52
               

               Conread position:
               482-655
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 95
               
Show alignments to all cow chromosomes.