Cow genome map
| Conread name: | Ss1.1-rhyp01c_d6.5 |
| Conread position: | 55-631 |
| Cow position: | chr18:8211704-8211117 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 91-666 |
| Cow position: | chr18:52467189-52467762 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 157-331 |
| Cow position: | chr18:17800005-17800180 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 163-375 |
| Cow position: | chr18:51410421-51410204 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 162, 94 |
| Conread position: | 416-655 |
| Cow position: | chr18:11268405-11268648 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 125, 184 |
| Conread position: | 419-631 |
| Cow position: | chr18:46865212-46865002 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 99, 23 |
| Conread position: | 419-647 |
| Cow position: | chr18:29885045-29884825 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 122, 38 |
| Conread position: | 419-652 |
| Cow position: | chr18:25694058-25694291 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 122, 75 |
| Conread position: | 419-654 |
| Cow position: | chr18:4699626-4699383 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 35, 162 |
| Conread position: | 420-655 |
| Cow position: | chr18:46883523-46883285 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 47 |
| Conread position: | 421-632 |
| Cow position: | chr18:12778907-12779116 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 153, 19 |
| Conread position: | 426-615 |
| Cow position: | chr18:44137869-44137678 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 106 |
| Conread position: | 426-655 |
| Cow position: | chr18:35086891-35087124 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 114, 165 |
| Conread position: | 427-812 |
| Cow position: | chr18:16054460-16054850 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 114, 32 |
| Conread position: | 428-655 |
| Cow position: | chr18:13788143-13788373 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 113, 77 |
| Conread position: | 431-631 |
| Cow position: | chr18:51779738-51779935 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 436-631 |
| Cow position: | chr18:24798849-24799042 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 139, 60 |
| Conread position: | 442-631 |
| Cow position: | chr18:48310578-48310390 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 33, 132 |
Show alignments to all cow chromosomes.